CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.085e-69
Identity = 131/224 (58.48%), Postives = 166/224 (74.11%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGASMDED 711
            ET GG+MT LI RNT IPTKK Q FSTY DNQP VLIQV+EGER  T+DN+LLGKFELSGIPPA RGVP+I V F +D NGIL+V AEDK TG+   ITITNDKGRLSKE+IEKM+ +AEK+  ED   ++KVEAKN L+NY  +M+ T++D +K++ K+   DK  I  A+++A  WL+ N  A+++  + K+K+LE +C PII K+Y Q GG     S DED
Sbjct:  426 ETVGGIMTQLIKRNTVIPTKKSQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGGPSPQPSGDED 649          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.335e-69
Identity = 128/213 (60.09%), Postives = 165/213 (77.46%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 681
            ET GGVMT LIPRNT +PTKK Q+ ST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI V F+ID NGIL V+AEDK TG KNKITITND+ RL+ EEIE+MV +AEK+  ED   K++++ +N LE+YAY+++N I D EK+  KL + DK+ +E A+EE I+WL+ +Q A+ ++F+ K KELE I  PII+K+Y   G
Sbjct:  427 ETVGGVMTKLIPRNTVVPTKKSQISSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKRLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLYGSAG 639          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.335e-69
Identity = 131/224 (58.48%), Postives = 166/224 (74.11%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGASMDED 711
            ET GG+MT LI RNT IPTKK Q FSTY DNQP VLIQV+EGER  T+DN+LLGKFELSGIPPA RGVP+I V F +D NGIL+V AEDK TG+   ITITNDKGRLSKE+IEKM+ +AEK+  ED   ++KVEAKN L+NY  +M+ T++D +K++ K+   DK  I  A+++A  WL+ N  A+++  + K+K+LE +C PII K+Y Q GG     S DED
Sbjct:   50 ETVGGIMTQLIKRNTVIPTKKSQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGGPSPQPSGDED 273          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.968e-69
Identity = 119/209 (56.94%), Postives = 171/209 (81.82%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ 672
            ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V FD+DANGILNV+A+DK++G++  ITI NDKGRLS+ +I++MV EAEKY+ ED++ ++ + A+N LE Y +N++ ++ D + S+KL  AD++ ++D  +E ++W+DGN +AE +E+E +M+EL  +C+PI+ K++Q
Sbjct:  403 ETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKDKSSGKEKNITIKNDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSDADRRTVQDRCDETLRWIDGNTMAEKEEYEHQMQELSRVCSPIMTKLHQ 610          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 6.968e-69
Identity = 119/209 (56.94%), Postives = 171/209 (81.82%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ 672
            ETAGGVMT LI RN+ IP K+ ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+F+LSGIPPAPRGVPQI V FD+DANGILNV+A+DK++G++  ITI NDKGRLS+ +I++MV EAEKY+ ED++ ++ + A+N LE Y +N++ ++ D + S+KL  AD++ ++D  +E ++W+DGN +AE +E+E +M+EL  +C+PI+ K++Q
Sbjct:  403 ETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRGVPQIEVTFDLDANGILNVAAKDKSSGKEKNITIKNDKGRLSQADIDRMVSEAEKYREEDEKQREAIAARNQLEAYCFNLKQSL-DGEGSSKLSEADRRTVQDRCDETLRWIDGNTMAEKEEYEHQMQELSRVCSPIMTKLHQ 610          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 2.027e-68
Identity = 128/218 (58.72%), Postives = 165/218 (75.69%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGA 696
            ETAGGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ +TG+   ITI NDKGRLS+ EI++MV EAEKY  ED++ ++++ ++NALE+Y +N++  + D+  + KL  ADK  + D   + I+WLD N  AE +EF+ K++EL   C+PI+ KM+ QG GA AGA
Sbjct:  402 ETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKQRQRITSRNALESYVFNVKQAV-DQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQQGAGAGAGA 618          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.648e-68
Identity = 133/222 (59.91%), Postives = 164/222 (73.87%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAGASMD 705
            ET GGVMT LIPR T +PTKK QVFSTY DNQ  V IQ+YEGER+ T+DNNLLGKF+LSGIPPA RGVPQI V F++D NGIL+VSAEDK +G K  ITITNDK RLS+ +I++MV+EA     ED   K++VEAKN LENY Y ++NTI D +KI  K+ + DK+ IE AI +A+ WLD N  AE +EF+++ K LE I  PI +K+Y   GG+  GA  D
Sbjct:  430 ETVGGVMTALIPRGTFVPTKKSQVFSTYQDNQDRVSIQIYEGERSMTKDNNLLGKFDLSGIPPAQRGVPQIEVTFEMDVNGILHVSAEDKASGSKESITITNDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLYGAAGGSPNGAGED 651          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 4.517e-68
Identity = 126/217 (58.06%), Postives = 165/217 (76.04%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAG 693
            ETAGGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ +TG+   ITI NDKGRLS+ EI++MV EAEKY  ED++H++++ ++NALE+Y +N++  + ++  + KL  ADK  + D   + I+WLD N  AE +EF+ K++EL   C+PI+ KM+ QG GA AG
Sbjct:  402 ETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAV-EQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQQGAGAGAG 617          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.517e-68
Identity = 126/217 (58.06%), Postives = 165/217 (76.04%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAG 693
            ETAGGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI V FD+DANGILNVSA++ +TG+   ITI NDKGRLS+ EI++MV EAEKY  ED++H++++ ++NALE+Y +N++  + ++  + KL  ADK  + D   + I+WLD N  AE +EF+ K++EL   C+PI+ KM+ QG GA AG
Sbjct:  402 ETAGGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAKEMSTGKAKNITIKNDKGRLSQAEIDRMVNEAEKYADEDEKHRQRITSRNALESYVFNVKQAV-EQAPAGKLDEADKNSVLDKCNDTIRWLDSNTTAEKEEFDHKLEELTRHCSPIMTKMHQQGAGAGAG 617          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 1.006e-67
Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKL 522
            ETAGGVMT LI RNT IPTK  Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA+DK+TG++NKITITNDKGRLSK+EIE+MVQEAEKYKA+D+  K ++ AKNALE+YA+NM+ TI+DEK+  K+
Sbjct:  161 ETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKI 319          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_PLAFO4.085e-6958.4878 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_SPETR5.335e-6960.0978 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_PLAFA5.335e-6958.4878 kDa glucose-regulated protein homolog (Fragment... [more]
HSP72_ANOAL6.968e-6956.94Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL6.968e-6956.94Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP71_DROSI2.027e-6858.72Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
BIP2_DICDI2.648e-6859.91Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
HSP71_DROME4.517e-6858.06Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME4.517e-6858.06Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]
HSP70_ONCVO1.006e-6777.99Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
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