CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 8.193e-86
Identity = 154/216 (71.30%), Postives = 180/216 (83.33%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 8.193e-86
Identity = 154/216 (71.30%), Postives = 180/216 (83.33%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 8.193e-86
Identity = 154/216 (71.30%), Postives = 180/216 (83.33%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAED++ + KV +KN+LE+YA+NM+ T++DEK+  K+   DK+KI D   E I WLD NQ AE +EFE + KELE +CNPII K+YQ  G   G
Sbjct:  404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 316.62 bits (810), Expect = 1.070e-85
Identity = 154/219 (70.32%), Postives = 183/219 (83.56%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGAS 699
            ETAGGVMT LI RNT IPTK  Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA DK+TG++NKITITNDKGRLSK++IE+MV EAEKYKA+D+  K ++ AKN LE+YA+N++ TI+DEK+  K+   DKKKIED  +E ++WLD NQ AE +EFE + K+LEG+ NPII+K+YQ  GGA  GA+
Sbjct:  405 ETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGAPPGAA 623          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 1.070e-85
Identity = 155/239 (64.85%), Postives = 190/239 (79.50%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDEDXXXXXXXXXXXXKIEEV 762
            ETAGGVMTVLI RNT IPTKK QVFSTY+DNQPGVLIQV+EGER+RT+DNN+LGKFEL+GIPPAPRGVPQI V FDIDANGILNVSA DK+TG+ NKITITNDKGRLSKEEIE+MV+EAEKYK ED++  KK+EAKN+LENYAYN+RNT++DEK+  K+   DKK IE+ ++E +++++ N+  E +E+E+K KEL+   NPII+K+YQ G      +                KIEEV
Sbjct:  410 ETAGGVMTVLIKRNTTIPTKKTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSASDKSTGKSNKITITNDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRDEKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQQGSVPDMGNFSTGQNEQDDNANMGPKIEEV 648          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_ONCMY (Heat shock cognate 70 kDa protein OS=Oncorhynchus mykiss GN=hsc71 PE=2 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 4.066e-85
Identity = 152/216 (70.37%), Postives = 178/216 (82.41%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFEL+GIPPAPRGVPQI V FDIDANGI+NVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYK EDD  + KV +KN+LE+YA+NM++T++DEK+  K+   DK KI +   E I WLD NQ AE +E+E   KELE +CNPII K+YQG G   G
Sbjct:  404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 4.066e-85
Identity = 150/211 (71.09%), Postives = 180/211 (85.31%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 678
            ETAGGVMTVLI RN+ IPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+F+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MV +AEKYKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  ADKKKI +   EA+ WL+ NQLAE DEF+ K +ELE +CNPII K+YQGG
Sbjct:  406 ETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQGG 616          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 6.936e-85
Identity = 150/216 (69.44%), Postives = 178/216 (82.41%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT +PTKK Q FSTY+DNQPGVLIQV+EGER+ TRDNNLLGKF L GIPP PRGVPQI+V FDIDANGILNVSA +K+TG++NKITITNDKGRL+K++IE+MVQEAEKYK+ED+ +  ++EAKN LENYAYN+RNT+ DEK+  K+  +DKK I+D + + I WLD NQ AE +EFE K KELEGI NPI+ KMY   G   G
Sbjct:  407 ETAGGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRGVPQIDVTFDIDANGILNVSAVEKSTGKENKITITNDKGRLTKDDIERMVQEAEKYKSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMYAAAGGAPG 622          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 313.538 bits (802), Expect = 9.059e-85
Identity = 150/211 (71.09%), Postives = 179/211 (84.83%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 678
            ETAGGVMTVLI RN+ IPTK+ Q+F+TYSDNQPGVLIQVYEGER  TRDNNLLG+F+L+GIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MVQEAE+YKAED+  ++K+ AKNALE+YA+NM++ + DE +  K+  +DKKKI D   E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ G
Sbjct:  406 ETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQSG 616          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 313.153 bits (801), Expect = 1.183e-84
Identity = 151/213 (70.89%), Postives = 179/213 (84.04%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 684
            ETAGGVMT LI RN+ IPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGILNV+A DK+TG+ NKITITNDKGRLSKEEIE+MVQEAE+YKAED+  +++V AKNALE+YA+NM++ ++DE +  K+  ADKKK+ D  +E I WLD N LAE +EF  K +ELE +CNPII+ +YQG GA
Sbjct:  404 ETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNTLAEKEEFVHKREELERVCNPIISGLYQGAGA 616          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_HORSE8.193e-8671.30Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR8.193e-8671.30Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN8.193e-8671.30Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP7A_CAEEL1.070e-8570.32Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_PYRSA1.070e-8564.85Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_ONCMY4.066e-8570.37Heat shock cognate 70 kDa protein OS=Oncorhynchus ... [more]
HS71L_PIG4.066e-8571.09Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP70_ACHKL6.936e-8569.44Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HS71L_MOUSE9.059e-8571.09Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP71_RAT1.183e-8470.89Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
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