CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.208e-82
Identity = 147/216 (68.06%), Postives = 175/216 (81.02%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGV T LI RNT +PTK  QVF+TYSDNQPGVLIQV+EGER+ T  NNLLGKFELSGIP APRGVPQI V FD+DANGILNVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKA+D+  + KV+AKN+LE+Y YNM+ T++DEK+  K+   DKK I     E ++W+D NQ AE D++E K KELE +CNPII K+YQ GG   G
Sbjct:  411 ETAGGVFTPLIKRNTTVPTKYSQVFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELSGIPLAPRGVPQIEVTFDVDANGILNVSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQAGGGMPG 626          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.496e-82
Identity = 144/211 (68.25%), Postives = 178/211 (84.36%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGG 678
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K++G++NKITITNDKGRLSKE+IEKMVQEAEKYKA+DD  +++V+AKNALE+YA+N+++ ++DE +  K+   DK+ I +   + I WL+ NQLAE +E+  + K+LE +C PII K+YQGG
Sbjct:  405 ETAGGVMTVLIKRNTTIPTKQTQSFTTYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKSSGKQNKITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQGG 615          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.496e-82
Identity = 153/243 (62.96%), Postives = 180/243 (74.07%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAG--ASMDEDXXXXXXXXXXXXKIEEVD 765
            ETAGGVMT LI RNT IP KK + FSTY+DNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAP  VPQI V FD+ A+GILNVSA DK+T + NKITITNDKGRLSKEEIE+MV EAEKYK ED+E   +++AKN LE+YAYN+RNT+ D+K++ K+  ADK+ +  AI+E I WLDGNQ    DE+E K KELEG+ NPI+ K+Y   GGA  G     D               IEEVD
Sbjct:  407 ETAGGVMTPLIKRNTTIPAKKSETFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPPRVPQIEVSFDVGADGILNVSAVDKSTNRSNKITITNDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDKVAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLYSAAGGAPGGMPGGFDPSGAPPPAADTTGPTIEEVD 649          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 303.523 bits (776), Expect = 9.374e-82
Identity = 146/216 (67.59%), Postives = 176/216 (81.48%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT IPTKK ++FSTYSDNQPGVLIQV+EGER RT+D NLLGKFELSGIPPAPRGVPQI V FD+DANGILNVSA +K TG+  KITITNDKGRLSKEEI++MV EAEKYKAED+    +++AKN LE+YAY++RN++ D  +  K+  +DK+ ++ A++E I+WLD N  A  DEFE K KELE + NPI+AK+YQ GGA  G
Sbjct:  402 ETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQAGGAPGG 617          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.224e-81
Identity = 146/221 (66.06%), Postives = 183/221 (82.81%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG---GGADAGAS 699
            ETAGGVMTVLI RN+ IPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DN+LLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA DK++G++NKITITNDKGRLSKEEIE+MVQEAE+YKA+D+  ++KV AKN LE+ A+NM++T++ + +  K+   D+KKI D   + I W++ NQ+AE +E+E + KELE +CN II K+YQG   GG  +G+S
Sbjct:  406 ETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSSGKQNKITITNDKGRLSKEEIERMVQEAERYKADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQGGMPGGMPSGSS 626          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.088e-81
Identity = 148/217 (68.20%), Postives = 178/217 (82.03%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMY-QGGGADAG 693
            ETAGGVMT LIPRNT IP KK Q FSTYSDNQ GVL+QVYEGER  TRDNNLLGKFEL+ IPPAPRGVPQI V FDIDANGILNVSAEDK+TG K+KITITNDKGRL+ E+IEKMV++AE +KA+D+  ++ VE+KN LENYAY +R+TIKD+KI+AKL   D+K +E+  +EAI WL  N  A  +E+E  MK+LE +C+PII+K+Y Q GG + G
Sbjct:  403 ETAGGVMTTLIPRNTTIPCKKNQTFSTYSDNQTGVLVQVYEGERAMTRDNNLLGKFELTNIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGNKHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVYGQQGGENPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.652e-81
Identity = 143/216 (66.20%), Postives = 173/216 (80.09%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT +PTKK Q FSTY+DNQPGVLIQ++EGER+ TRDNNLLGKF L GIPP PRGVPQI+V FDIDANGI NVSA +K+TG++NKITITND+    + +I++MV EAEKYK+ED+ +K ++EAKN LENY+YN+RNT+ DEK+  ++P  DKK IED + E I WLD NQ AE +E+E K KELEGI NPI+ KMY   GA  G
Sbjct:  407 ETAGGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQIDVTFDIDANGIFNVSAVEKSTGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMYAAAGAAGG 622          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 300.827 bits (769), Expect = 6.076e-81
Identity = 142/216 (65.74%), Postives = 176/216 (81.48%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVM+VLI RNT IPTK+ Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNV+A +++T ++NKITITNDKGRLSKE+IE+MV EAEKY+ ED++ K+ + AKN LE+Y +NM+ T+ ++ +  K+  +D+  I D   E I+WLD NQLA+ +E+E + KELEG+CNPII K+YQG G   G
Sbjct:  404 ETAGGVMSVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVTALERSTNKENKITITNDKGRLSKEDIERMVNEAEKYRNEDEKQKETIAAKNGLESYCFNMKATLDEDNLKTKISDSDRTTILDKCNETIKWLDANQLADKEEYEHRQKELEGVCNPIITKLYQGAGFPPG 619          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 7.936e-81
Identity = 145/221 (65.61%), Postives = 178/221 (80.54%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDE 708
            ETAGG+MT LIPRN+ IPTKK + FSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRGVPQI+V FDIDANGILNVSA +K TG+ NKITITNDKGRLSK++I++MV EAEKY+A+D+   ++V+AKN LE+YA+ ++NTI +     K+   D K++E A +E I WLD +Q A  DE++D+ KELEGI NPI+ K Y G GA AG    E
Sbjct:  402 ETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDVTFDIDANGILNVSALEKGTGKSNKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY-GAGAGAGPGAGE 621          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 300.056 bits (767), Expect = 1.036e-80
Identity = 141/217 (64.98%), Postives = 178/217 (82.03%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 696
            ETAGG+MT LIPRN+ IPTKK +VFSTY+DNQPGVLIQV+EGERTRT+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+ NKITITNDKGRLSKE+I+KMV EAEK+KAED++  ++V+AKN LE+YA+ ++N++ +     K+   D +K+E A ++AI WLD +Q A  +E++++ KELEG+ NPI++K Y   G   GA
Sbjct:  402 ETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSNKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKVGEEDARKLEAAAQDAINWLDASQAASTEEYKERQKELEGVANPIMSKFYGAAGGAPGA 618          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_HYDMA4.208e-8268.06Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_XENLA5.496e-8268.25Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_BLAEM5.496e-8262.96Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP72_SCHPO9.374e-8267.59Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_PLEWA1.224e-8166.06Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HS7C2_DICDI2.088e-8168.20Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_BRELC4.652e-8166.20Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP7D_DROME6.076e-8165.74Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP73_YEAST7.936e-8165.61Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP74_YEAST1.036e-8064.98Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
back to top