CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 292.738 bits (748), Expect = 1.655e-78
Identity = 142/218 (65.14%), Postives = 176/218 (80.73%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 699
            ETAGGVMT LIPRN+ IPTKK +VFSTY+DNQPGVLIQV+EGER +T+DNNLLGKFELSGIPPAPRGVPQI V FD+D+NGILNVSA +K TG+ NKITITNDKGRLSKE+IEKMV EAEK+K ED++  +++ +KN LE+ AY+++NTI +     KL  ADK  +    EE I WLD N  A  +EF+D++KEL+ + NPI++K+YQ GGA  GA+
Sbjct:  401 ETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDAVTKKAEETIAWLDSNTTATKEEFDDQLKELQEVANPIMSKLYQAGGAPEGAA 616          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 8.212e-78
Identity = 141/217 (64.98%), Postives = 172/217 (79.26%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG-GGADAG 693
            ETAGGVMT LI RNT IPTKK Q+FSTY+DNQPGV IQV+EGER  T+D +LLG F+LSGIPPAPRGVPQI V FD+DANGILNVSAE+K TG++N+ITITNDKGRLSK+EIE+MV +A KY+A+D   + +VEAKN LENYAY+M+NT+ D  +S KL  +DK  +   I+  ++WL  NQ A  +E+E K KELE +CNPI+ KMYQ  GGA  G
Sbjct:  406 ETAGGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGGG 622          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 289.656 bits (740), Expect = 1.401e-77
Identity = 139/220 (63.18%), Postives = 176/220 (80.00%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA-DAGASM 702
            ETAGGVMTVLI RNT IPTKK Q+F+T  D Q GVLIQV+EGER  T+DNNLLGKF L+GI PAPRGVPQI V FDIDANGILNV+A DK+TG+   +TITNDKGRLS+EEI++MV+EAEKYK ED++ +K VE+K+ LENY Y+M+NT+ ++++  KL   +     + I EA++W++ NQLAE DEFEDK+K +EG+CNP++ K+YQ GGA  AG  M
Sbjct:  405 ETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNTLSEDQVKQKLGADEVDNALNTITEALKWVETNQLAEHDEFEDKLKHVEGVCNPLVTKLYQSGGAPGAGPDM 624          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 289.271 bits (739), Expect = 1.830e-77
Identity = 140/217 (64.52%), Postives = 170/217 (78.34%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGA 696
            ETAGGVMT LIPRNT IPTKK ++FSTYSDNQPGVLIQVYEGER RT+DNNLLGKFELSGIPPAPRGVPQI V FDIDANGILNVSA +K TG+  KITITNDKGRLS+EEIE+MV EAEKYK ED++  K++ AKN LE+YAY+++ T  +++   K+  + ++    A ++ I WLD NQ A A+E++DK KELE   N ++  +Y  GG   GA
Sbjct:  402 ETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSEKITITNDKGRLSQEEIERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQTTSEKQFEEKVEASKREAFTKACDDTIAWLDENQTATAEEYDDKRKELEQAGNEVLKDLYAEGGVPGGA 618          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 288.886 bits (738), Expect = 2.389e-77
Identity = 142/216 (65.74%), Postives = 171/216 (79.17%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT IPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRG PQI V FDIDANGILNVSA DK TG++NKITITNDKGRLSKEEIE+MV +A+KYKAED++ + +V AKN+LE+Y Y M+  ++ E +  K+P +D++ I    E+ I WLD +Q AE  E+E K +ELE +C PII K+YQ GG   G
Sbjct:  402 ETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQVEGE-LKEKIPESDRQVIISKCEDTISWLDVHQSAEKHEYESKREELEKVCAPIITKVYQAGGMPGG 616          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.076e-77
Identity = 147/221 (66.52%), Postives = 172/221 (77.83%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASMDE 708
            ETAGGVMTVLI RNT IPTK+ Q F+TYSDNQPGVL QVYE     T+DNNLLGKFEL+GIPPA    PQI V FDIDANGI+NVSA DK+TG++NKITITNDKGRLSKE+IE+MVQEAEKYKAEDD  + KV AKN LE+YA+NM++T++DEK++ K+   DK+KI D   E I WLD NQ AE DE+  + KELE +CNPII K+YQ  G   G    E
Sbjct:  404 ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLNQVYE-VGAMTKDNNLLGKFELTGIPPA-LWCPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQSAGGMPGGCQRE 622          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.076e-77
Identity = 135/212 (63.68%), Postives = 171/212 (80.66%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGG 681
            ETAGGVMT LI RNT IPTK+ Q+F+TY+DNQPGVLIQV+EGER  TRDNN LGKFELS IPPAPRGVPQ+ V FDIDANGILNV+A +K+TG++N+ITITNDKGRLSKE+IE+MV +AE Y+  D++ + ++ AKN LE+Y + +R+T+ DE +S++   AD++ I+    E I WLD NQLAE  EFE K +ELE IC+PII ++YQG G
Sbjct:  404 ETAGGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPRGVPQVEVTFDIDANGILNVTALEKSTGKENRITITNDKGRLSKEDIERMVNDAEAYRQADEQQRDRINAKNQLESYCFQLRSTLDDEHLSSRFSPADRETIQQRSSETIAWLDANQLAERQEFEHKQQELERICSPIITRLYQGAG 615          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 4.076e-77
Identity = 133/218 (61.01%), Postives = 176/218 (80.73%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 699
            ETAGGVMT LI RN  IPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSKEE+E+MV+EAE+YKAED+  + +V AKN+LE + ++++ ++++E +  K+P  D+ K++D  +E + WL+ NQLA+ +E+E + +ELE IC PI +++Y G G   G+S
Sbjct:  406 ETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGSLQEESLRDKIPKEDRHKVQDKCQEVLAWLEHNQLADKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSS 623          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 287.73 bits (735), Expect = 5.323e-77
Identity = 134/218 (61.47%), Postives = 175/218 (80.28%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 699
            ETAGGVMT LI RN  IPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSKEE+E+MV EAE+YKAED+  + +V AKN+LE + ++++ ++++E +  K+P  D++K++D   E + WL+ NQLAE +E+E + +ELE IC PI +++Y G G   G+S
Sbjct:  406 ETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKEEVERMVHEAEQYKAEDEAQRDRVAAKNSLEAHVFHVKGSLQEESLRDKIPEEDRRKMQDKCREVLAWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGGPGVPGGSS 623          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 5.323e-77
Identity = 139/213 (65.26%), Postives = 170/213 (79.81%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGA 684
            ETAGGVMT LI RNT IPTKK + FST++DNQPGVLIQV+EGER RT++NNLLGKFEL+GIPPAP GVPQI V FD+DANGI+NVSA +K  G+ NKI ITNDKGRLSKEEIE+M+ EAEKYKAED+    ++ AKN LE+YAY++RNTI D K+  KL  +DK+K++  I++ + WLD NQ A  +EFE + KELE + NPI+ K Y  GGA
Sbjct:  402 ETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQIEVTFDVDANGIMNVSALEKGIGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNTISDSKVDEKLDASDKEKLKTEIDKTVSWLDENQTATKEEFEAQQKELESVANPIMMKFYGAGGA 613          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_YEAST1.655e-7865.14Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP70_LEIDO8.212e-7864.98Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_THEPA1.401e-7763.18Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP72_PICAN1.830e-7764.52Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP70_SCHMA2.389e-7765.74Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP7C_ORYLA4.076e-7766.52Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP7A_DROME4.076e-7763.68Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
HSP76_SAGOE4.076e-7761.01Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP76_HUMAN5.323e-7761.47Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP71_PARBA5.323e-7765.26Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
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