CK938878

Overview
NameCK938878
Unique NameCK938878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length832
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 6.952e-77
Identity = 138/219 (63.01%), Postives = 174/219 (79.45%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASM 702
            ETAGGVMT LI RNT IPTKK Q+FSTY+DNQPGV IQV+EGER  T+D +LLG FELSGIPP PRGVPQI V FD+DANGILNVSAE+K TG++N+I +TNDKGRLS+ EIE+MV+EA KY+AED +  ++++AKN LENYA++M+N + D  ++ K+  ADKK I  A+EEA++WL+ NQ A  +E+E + KELE +C PI+  MYQG    AGA M
Sbjct:  407 ETAGGVMTSLIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQG---MAGAGM 622          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP76_PIG (Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.549e-76
Identity = 134/218 (61.47%), Postives = 174/218 (79.82%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGAS 699
            ETAGGVMT LI RN  IPTK+ Q F+TYSDNQPGVLIQVYEGER  TRDNNLLG+FELSGIPPAPRGVPQI V FDIDANGIL+V+A D++TG+ NKITITNDKGRLSKEE+E+MV+EA++YK ED+  + +V AKN+LE Y ++++ ++ +E +  K+P  D+ K++D  +E + WL+ NQLAE +E+E + +ELE IC PI +++Y   G   G+S
Sbjct:  406 ETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGRANKITITNDKGRLSKEEVERMVREADEYKVEDEAQRDRVAAKNSLEAYVFHVKGSLHEESLRDKIPEEDRCKVQDKCQEVLTWLEHNQLAEKEEYEHQKRELEQICRPIFSRLYGAPGIPGGSS 623          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 286.189 bits (731), Expect = 1.549e-76
Identity = 133/219 (60.73%), Postives = 173/219 (79.00%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAGASM 702
            ETAGGVMTVLI RNT IPTKK Q+F+T  D Q GVLIQV+EGER  T+DNNLLGKF L+GI PAPRGVPQI V FDIDANGILNV+A DK+TG+   +TITNDKGRLS+EEI++MV+EAEKYK ED++ ++ VE+++ LENY Y+M+NT+ ++++  KL   +       I +A++W++ NQLAE DE+EDK+K +EG+CNP++ K+YQ G A  G  M
Sbjct:  405 ETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQSGAAPGGPDM 623          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.549e-76
Identity = 136/216 (62.96%), Postives = 174/216 (80.56%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT IP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V FDIDANGILNV+A +K+TG++N ITITNDKGRLS EEI++MV +AEKYKAED+E+KK++EA+N+LENY Y ++++++D+KI  KL  ++ +    +I   ++WL+ NQLA  +E+E K KE E +C PI++K+YQ  G  AG
Sbjct:  417 ETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDANGILNVTAVEKSTGKQNHITITNDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQDVGGAAG 632          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 5.885e-76
Identity = 135/216 (62.50%), Postives = 173/216 (80.09%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQGGGADAG 693
            ETAGGVMT LI RNT IP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI V FDIDANGILNV+A +K+TG++N ITITNDKGRLS++EI++MV +AEKYKAED+E++K++EA+N+LENY Y ++++++D+KI  KL  A+ +     I   ++WL+ NQLA  DE+E K KE E +C PI++K+YQ     AG
Sbjct:  417 ETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQIEVTFDIDANGILNVTAVEKSTGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIYQDAAGAAG 632          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.921e-75
Identity = 133/210 (63.33%), Postives = 169/210 (80.48%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKDEKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQG 675
            ET GGVMT ++PRNT IP KK Q FST++DNQ GVLIQVYEGERT T+DNNLLGKFEL+GIPPAPRG PQI V FD+D+NGILNV+AEDKTT +  KITITNDKGRLS ++I KMV++AEK+K +D + K+++E+KN LENY ++++N+I D+KI +KL  +DK  IE   E  ++WL+ NQ AE DEF  K+ +LE I NPI++K YQG
Sbjct:  405 ETVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQIEVSFDVDSNGILNVTAEDKTTKKVEKITITNDKGRLSLKDITKMVEDAEKFKEQDQQQKERIESKNNLENYIFSVKNSINDQKIISKLSKSDKNIIESETESTLKWLESNQSAEKDEFNQKISDLESIVNPILSKFYQG 614          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.921e-75
Identity = 139/227 (61.23%), Postives = 181/227 (79.74%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ--GG--GADAGASMDED 711
            ET GGVMT LIPRNT IPTKK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK +G+  KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNMRN I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E +CNPII  +YQ  GG  G ++GAS D+D
Sbjct:  437 ETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPGGESGASEDDD 663          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.815e-75
Identity = 138/224 (61.61%), Postives = 178/224 (79.46%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 711
            ET GGVMT LIPRNT IPTKK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNM+N I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E ICNPII  +YQ  GGA  G S +E+
Sbjct:   60 ETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQRSGGAPGGGSSEEE 283          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.982e-75
Identity = 138/225 (61.33%), Postives = 177/225 (78.67%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ--GGGADAGASMDED 711
            ET GGVMT  IPRNT IPTKK QVF+TY D Q  V IQV+EGER+ T+D   LGKF+L+GIPPAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+EEIE+MV+EAE++  ED + K+K++A+NALE Y YNM+N I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++++K+KE+E +CNPII  +YQ  GG    GAS +ED
Sbjct:  436 ETVGGVMTKFIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRNLGKFDLTGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKAEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPGGGASEEED 660          
BLAST of CK938878 vs. ExPASy Swiss-Prot
Match: BIP2_TOBAC (Luminal-binding protein 2 (Fragment) OS=Nicotiana tabacum GN=BIP2 PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.982e-75
Identity = 137/224 (61.16%), Postives = 178/224 (79.46%), Query Frame = 1
Query:   46 ETAGGVMTVLIPRNTAIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDDEHKKKVEAKNALENYAYNMRNTIKD-EKISAKLPTADKKKIEDAIEEAIQWLDGNQLAEADEFEDKMKELEGICNPIIAKMYQ-GGGADAGASMDED 711
            ET GGVMT LIPRNT IPTKK QVF+TY D Q  V IQV+EGER+ T+D  LLGKF+L+GI PAPRG PQI V F++DANGILNV AEDK TG+  KITITNDKGRLS+EEIE+MV+EAE++  ED + K++++A+N+LE Y YNM+N I D +K++ KL + +K+KIE A +EA++WLD NQ AE +++E+K+KE+E +CNPII  +YQ  GGA  G S +E+
Sbjct:   60 ETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGGGSSEEE 283          
The following BLAST results are available for this feature:
BLAST of CK938878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_TRYCR6.952e-7763.01Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP76_PIG1.549e-7661.47Heat shock 70 kDa protein 6 OS=Sus scrofa GN=HSPA6... [more]
HSP70_THEAN1.549e-7660.73Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_PLACB1.549e-7662.96Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP70_PLAFA5.885e-7662.50Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HS7C3_DICDI2.921e-7563.33Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
BIP4_TOBAC2.921e-7561.23Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
BIP1_TOBAC3.815e-7561.61Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
BIP_SOLLC4.982e-7561.33Luminal-binding protein OS=Solanum lycopersicum PE... [more]
BIP2_TOBAC4.982e-7561.16Luminal-binding protein 2 (Fragment) OS=Nicotiana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004437_B06 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938878 ID=CK938878; Name=CK938878; organism=Citrus sinensis; type=EST; length=832bp
GGGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTGGGTTTGGAGAC
TGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCGCTATTCCAA
CCAAGAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTG
TTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTT
GCTTGGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTC
CACAAATCAATGTGTGCTTTGACATTGATGCTAATGGTATCTTGAACGTT
TCCGCTGAGGACAAAACCACCGGACAGAAGAATAAGATTACCATCACAAA
TGACAAGGGCAGACTCTCTAAGGAGGAGATAGAGAAGATGGTACAAGAGG
CAGAAAAATACAAGGCCGAGGATGACGAGCACAAGAAAAAGGTGGAGGCC
AAGAATGCTCTTGAGAATTATGCTTACAACATGAGAAACACAATCAAGGA
TGAAAAGATCAGCGCAAAGCTTCCCACTGCTGACAAGAAGAAAATTGAAG
ATGCCATTGAGGAGGCCATCCAATGGCTTGACGGGAACCAGCTCGCAGAG
GCAGATGAGTTTGAAGATAAGATGAAAGAGCTGGAGGGCATCTGCAACCC
AATTATTGCCAAGATGTACCAAGGAGGTGGAGCTGATGCTGGTGCAAGTA
TGGATGAGGATGGTCCTTCTGCAGGTGCTGGTAGCGGTGCTGGCCCCAAG
ATTGAGGAGGTGGATTAAATTTGAGGATTTATGCTTAATGTTGTTTAATG
ATTAGGGGTTGAGTTGGGGAGTGTGATCTTTT
back to top