EY649579 | Citrus Genome Database

Overview


Name	EY649579
Unique Name	EY649579
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	827

Libraries


Library Name	Type
Sweet orange leaf, greenhouse plant	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig7838	contig	Csv1_Contig7838:430..1253.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBAN_GUITH (Tubulin alpha chain, nucleomorph OS=Guillardia theta GN=tubA PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 3.488e-86
Identity = 98/128 (76.56%), Postives = 109/128 (85.16%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI S+TASL+ DGALNVD+TEF TNLVPYPRIHFMLSS APVIS + A HEQ S AEITN+AFEP+SMMAKCDPR GKYMA CLM+RGDV P DVN +VA I T + IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSITASLRFDGALNVDITEFQTNLVPYPRIHFMLSSLAPVISLEMANHEQYSTAEITNAAFEPNSMMAKCDPRRGKYMACCLMFRGDVAPKDVNGSVAAIKTKKTIQFVDWCPTGFKCGINYQP 359

HSP 2 Score: 131.724 bits (330), Expect = 3.488e-86
Identity = 65/92 (70.65%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +N+V             ERL  DYGKKSKLGFTVYPSPQVST+V EPYNSVL+THSLLEHTDVA +LD+EAIY+IC RSL+IERPTYTNL
Sbjct:  136 LIFNSVGGGTGSGLGSLLLERLSLDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLATHSLLEHTDVAVVLDNEAIYEICQRSLNIERPTYTNL 227

HSP 3 Score: 22.7126 bits (47), Expect = 3.488e-86
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++L +NC+GLQG   F
Sbjct:  123 RKLVENCSGLQGFLIF 138

HSP 4 Score: 21.9422 bits (45), Expect = 3.488e-86
Identity = 9/10 (90.00%), Postives = 9/10 (90.00%), Query Frame = 1

Query:  748 PTVVPRGDLA 777
            PTVVP GDLA
Sbjct:  360 PTVVPDGDLA 369

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBAN_PHYPO (Tubulin alpha-1B chain OS=Physarum polycephalum GN=ALTBN PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 5.908e-86
Identity = 103/129 (79.84%), Postives = 112/129 (86.82%), Query Frame = 2

Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQ 745
            L +QVI SLT SL+ DGALNVD+ EF TNLVPYPRIHFML+SYAPVISA+KA+HEQLS AE+TN+ FEPSSMMAKCDPRHGKYMA CLMYRGDV P DV AAVA I T R IQ +DWCPTGFKCGINYQ
Sbjct:  230 LVAQVISSLTTSLRFDGALNVDINEFQTNLVPYPRIHFMLASYAPVISAEKAFHEQLSVAELTNTVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVTAAVAVIKTKRTIQFVDWCPTGFKCGINYQ 358

HSP 2 Score: 120.939 bits (302), Expect = 5.908e-86
Identity = 57/73 (78.08%), Postives = 64/73 (87.67%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F VYPSPQVST+V EPYNSVLSTH LLEHTDVA +LD+EAIYD+C +SLDI+RP+Y NL
Sbjct:  155 ERLSVDYGKKSKLDFCVYPSPQVSTAVVEPYNSVLSTHGLLEHTDVAFMLDNEAIYDLCKKSLDIDRPSYANL 227

HSP 3 Score: 23.483 bits (49), Expect = 5.908e-86
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD C+GLQG   F
Sbjct:  123 RKLADQCSGLQGFLVF 138

HSP 4 Score: 21.9422 bits (45), Expect = 5.908e-86
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1

Query:  745 APTVVPRGDLA 777
            AP+VVP GDLA
Sbjct:  359 APSVVPGGDLA 369

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA5_CHICK (Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.622e-85
Identity = 99/128 (77.34%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITNS FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 2.622e-85
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSGDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 28.8758 bits (63), Expect = 2.622e-85
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG  CF
Sbjct:  123 RKLADQCTGLQGFLCF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1_STYLE (Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 4.452e-85
Identity = 99/128 (77.34%), Postives = 105/128 (82.03%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            +QVI SLTASL+ DGALNVDVTEF TNLVPYP +        P   A+KAYHEQLS AEITNSAFEP+SMMAKCDPRHGKYMA CLMYRGDV P DVNAAVATI T R IQ +DWCPTGFKCGINYQP
Sbjct:  232 AQVISSLTASLRFDGALNVDVTEFQTNLVPYPSVIIR-----PSTPAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQP 354

HSP 2 Score: 134.806 bits (338), Expect = 4.452e-85
Identity = 66/92 (71.74%), Postives = 73/92 (79.35%), Query Frame = 1

Query:   76 LFYNAVXXXXXXXXXXXXXERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            L +N+V             ERL  DYGKKSKLGFTVYPSPQVST+V EPYNSVLSTHSLLEHTDVA +LD+EA+YDIC R+LDIERPTYTNL
Sbjct:  136 LVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 4.452e-85
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1C_BOVIN (Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 4.815e-84
Identity = 99/130 (76.15%), Postives = 113/130 (86.92%), Query Frame = 2

Query:  359 LGSQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            L SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  230 LMSQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 4.815e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 4.815e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1B_RAT (Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tuba1b PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.173e-84
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 8.173e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 8.173e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1B_PIG (Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.173e-84
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 8.173e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 8.173e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1B_PANTR (Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.173e-84
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 8.173e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 8.173e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1B_MOUSE (Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b PE=1 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 8.173e-84
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 8.173e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 8.173e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

[Close]

BLAST of EY649579 vs. ExPASy Swiss-Prot
Match: TBA1B_MERUN (Tubulin alpha-1B chain OS=Meriones unguiculatus GN=TUBA1B PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.173e-84
Identity = 98/128 (76.56%), Postives = 112/128 (87.50%), Query Frame = 2

Query:  365 SQVIPSLTASLKPDGALNVDVTEFPTNLVPYPRIHFMLSSYAPVISADKAYHEQLSGAEITNSAFEPSSMMAKCDPRHGKYMARCLMYRGDVEPNDVNAAVATINTNRLIQLLDWCPTGFKCGINYQP 748
            SQ++ S+TASL+ DGALNVD+TEF TNLVPYPRIHF L++YAPVISA+KAYHEQLS AEITN+ FEP++ M KCDPRHGKYMA CL+YRGDV P DVNAA+ATI T R IQ +DWCPTGFK GINYQP
Sbjct:  232 SQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359

HSP 2 Score: 117.472 bits (293), Expect = 8.173e-84
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 1

Query:  133 ERLPADYGKKSKLGFTVYPSPQVSTSVAEPYNSVLSTHSLLEHTDVAALLDSEAIYDICWRSLDIERPTYTNL 351
            ERL  DYGKKSKL F++YP+PQVST+V EPYNS+L+TH+ LEH+D A ++D+EAIYDIC R+LDIERPTYTNL
Sbjct:  155 ERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNL 227

HSP 3 Score: 25.0238 bits (53), Expect = 8.173e-84
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 2

Query:   35 QELADNCTGLQGIPCF 82
            ++LAD CTGLQG   F
Sbjct:  123 RKLADQCTGLQGFLVF 138

The following BLAST results are available for this feature:

BLAST of EY649579 vs. ExPASy Swiss-Prot

BLAST of EY649579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 399


Match Name	E-value	Identity	Description
TBAN_GUITH	3.488e-86	76.56	Tubulin alpha chain, nucleomorph OS=Guillardia the...	[more]
TBAN_PHYPO	5.908e-86	79.84	Tubulin alpha-1B chain OS=Physarum polycephalum GN...	[more]
TBA5_CHICK	2.622e-85	77.34	Tubulin alpha-5 chain OS=Gallus gallus PE=3 SV=1	[more]
TBA1_STYLE	4.452e-85	77.34	Tubulin alpha-1 chain OS=Stylonychia lemnae PE=3 S...	[more]
TBA1C_BOVIN	4.815e-84	76.15	Tubulin alpha-1C chain OS=Bos taurus GN=TUBA1C PE=...	[more]
TBA1B_RAT	8.173e-84	76.56	Tubulin alpha-1B chain OS=Rattus norvegicus GN=Tub...	[more]
TBA1B_PIG	8.173e-84	76.56	Tubulin alpha-1B chain OS=Sus scrofa GN=TUBA1B PE=...	[more]
TBA1B_PANTR	8.173e-84	76.56	Tubulin alpha-1B chain OS=Pan troglodytes GN=TUBA1...	[more]
TBA1B_MOUSE	8.173e-84	76.56	Tubulin alpha-1B chain OS=Mus musculus GN=Tuba1b P...	[more]
TBA1B_MERUN	8.173e-84	76.56	Tubulin alpha-1B chain OS=Meriones unguiculatus GN...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-100-001-B11-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY649579 ID=EY649579; Name=EY649579; organism=Citrus sinensis; type=EST; length=827bp
CCACGCGTCCGGTTGATCTCTGCCTTGACCGCATCAGGAGCTGGCTGATA
ACTGCACTGGTCTCCAGGGCATTCCTTGTTTTACAATGCTGTTGGTGGAG
GAACTGGCTCTGGTCTTGGGTCTCTTCTTCTGGAGAGGTTGCCTGCTGAC
TATGGAAAGAAGTCAAAGTTGGGCTTCACTGTCTACCCATCTCCTCAGGT
CTCCACTTCTGTTGCTGAGCCTTACAACAGTGTCCTCTCAACCCACTCCC
TGTTGGAGCATACTGATGTGGCTGCTCTTCTCGACAGTGAGGCCATTTAT
GACATCTGCTGGCGCTCCCTTGACATTGAACGTCCTACCTATACTAACCT
CATATATACTTGGTTCTCAGGTCATTCCTTCATTGACTGCCTCACTGAAG
CCTGATGGCGCTTTGAATGTGGATGTGACTGAATTCCCAACCAACTTGGT
CCCATACCCAAGAATCCACTTCATGCTTTCCTCCTATGCACCAGTCATCT
CAGCTGATAAAGCCTACCATGAACAACTCTCAGGTGCTGAGATCACCAAC
AGTGCCTTCGAGCCCTCATCTATGATGGCCAAATGTGATCCTCGGCATGG
CAAGTACATGGCTCGCTGCCTCATGTACCGAGGTGATGTTGAGCCCAACG
ATGTCAATGCAGCTGTTGCTACCATCAACACCAACCGTCTCATCCAATTA
CTGGACTGGTGCCCGACTGGGTTCAAGTGTGGTATCAACTACCAGCCCCA
ACTGTGGTTCCTCGTGGAGACCTTGCCACGTGCAAAGGGCTGATTGCATG
ATCTACACTCCCCCATGTGCATGAGTG