CN187891

Overview
NameCN187891
Unique NameCN187891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length773
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.033e-64
Identity = 131/201 (65.17%), Postives = 150/201 (74.63%), Query Frame = -3 
Query:  175 AVGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDAEMPPLED--EGNEESKMEEVD 771
            ++GQLKE++GKKLVSATKEGL L              + FE LCK +K++LGDKVEKV+VSDR+VDSPCCLVTGEYGW+ANMERIMKAQALRD        SKKTMEINP+N IM+ELRKRA+ DKNDKSVKD          LTSGFSL++PNTF  RIHRMLKLGLSI+E E+   DA+MP LED     E SKMEEVD
Sbjct:  500 SIGQLKEFEGKKLVSATKEGLKLDESEDEKKKQEELKEKFEGLCKVMKDVLGDKVEKVIVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENSIMDELRKRADADKNDKSVKDLVLLLFETALLTSGFSLEEPNTFGNRIHRMLKLGLSIDE-ESGDADADMPALEDPEADAEGSKMEEVD 699
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 6.556e-55
Identity = 116/204 (56.86%), Postives = 142/204 (69.61%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+TA ++A      EMPPLE + ++ S+MEEVD
Sbjct:  526 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLEGD-DDTSRMEEVD 728
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.491e-54
Identity = 115/204 (56.37%), Postives = 140/204 (68.63%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD+      EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.491e-54
Identity = 115/204 (56.37%), Postives = 140/204 (68.63%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD+      EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD       EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD       EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 211.846 bits (538), Expect = 3.254e-54
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD       EMPPLE + ++ S+MEEVD
Sbjct:  530 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLEGD-DDTSRMEEVD 732
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 7.249e-54
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD       EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 210.69 bits (535), Expect = 7.249e-54
Identity = 115/204 (56.37%), Postives = 139/204 (68.14%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA------EMPPLEDEGNEESKMEEVD 768
            V QLKE++GK LVS TKEGL L                FENLCK +K+IL  KVEKVVVS+R+V SPCC+VT  YGW+ANMERIMKAQALRD        +KK +EINPD+ I+E LR++AE DKNDKSVKD          L+SGFSL+DP T A RI+RM+KLGL I+ED+   DD       EMPPLE + ++ S+MEEVD
Sbjct:  531 VQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPLEGD-DDTSRMEEVD 733
[Close]
BLAST of CN187891 vs. ExPASy Swiss-Prot
Match: HSP83_ANOGA (Heat shock protein 83 OS=Anopheles gambiae GN=Hsp83 PE=3 SV=3)

HSP 1 Score: 210.305 bits (534), Expect = 9.467e-54
Identity = 113/211 (53.55%), Postives = 136/211 (64.45%), Query Frame = -3 
Query:  175 VGQLKEYDGKKLVSATKEGLNLXXXXXXXXXXXXXXKSFENLCKTIKEILGDKVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXSKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXLTSGFSLDDPNTFAARIHRMLKLGLSIEEDE-------------TAGDDAEMPPLEDEGNEESKMEEVD 768
            + QLKEY GK+LVS TKEGL L                FENLCK +K +L  KVEKV+VS+R+VDSPCC+VT +YGWSANMERIMKAQALRD         KK +EINPD+ I+E LR+RAE DKNDK+VKD          L+SGFSLD+P T A+RI+RM+KLGL I+EDE              A    + PPL D+  + S MEEVD
Sbjct:  510 IQQLKEYKGKQLVSVTKEGLELPEDEAEKKKREEDKAKFENLCKVMKSVLESKVEKVMVSNRLVDSPCCIVTSQYGWSANMERIMKAQALRDSSAMGYMAGKKHLEINPDHAIIETLRQRAEADKNDKAVKDLVILLFETALLSSGFSLDEPGTHASRIYRMIKLGLGIDEDEPMTTEESSSGAAAAAPASGDAPPLVDDSEDLSHMEEVD 720
The following BLAST results are available for this feature:
BLAST of CN187891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
HSP80_SOLLC2.033e-6465.17Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HS90A_CHICK6.556e-5556.86Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90A_PIG2.491e-5456.37Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_BOVIN2.491e-5456.37Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90A_PANTR3.254e-5456.37Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA3.254e-5456.37Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN3.254e-5456.37Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_RAT7.249e-5456.37Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE7.249e-5456.37Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HSP83_ANOGA9.467e-5453.55Heat shock protein 83 OS=Anopheles gambiae GN=Hsp8... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C20_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187891 ID=CN187891; Name=CN187891; organism=Citrus sinensis; type=EST; length=773bp
GAGGCTAAAGGGTAATCATCTTACACGGCATAAGAAAATACACAAGACTC
AACAAGACTCAGCTAACCATAGCCAATAACTAAGCAGAAAGCCAAAAGTC
AATCCACTTCCATGAGACTTTATATACCATCACTCCATTGCGCGCTAATA
ACAGCGTTCCTCTCTCCCTCCTTAGTCGACTTCCTCCATCTTGCTCTCCT
CATTTCCTTCATCCTCCAATGGTGGCATCTCAGCATCATCACCAGCAGTC
TCATCCTCTTCAATGCTCAGACCCAACTTGAGCATCCTGTGAATCCTTGC
AGCAAATGTGTTCGGATCATCCAGACTGAAACCAGAGGTCAACAGAGCAG
TCTCATAGAGCAGCAGGACAAGATCCTTCACTGACTTGTCATTCTTATCA
ACCTCAGCTCTCTTTCTGAGTTCCTCCATTATGCCATTGTCAGGATTTAT
TTCCATAGTCTTTTTGCTTGACATGTATGAGCTCATGCTGCTATCTCTCA
AAGCCTGAGCTTTCATTATCCTCTCCATGTTCGCCGACCAGCCATACTCA
CCGGTGACCAAACAGCAAGGAGAGTCTACAATTCTGTCAGATACGACAAC
TTTCTCCACCTTGTCTCCAAGAATTTCCTTGATTGTCTTGCACAAGTTCT
CGAAAGACTTCTTTTTTTCCTCCCTTTTCTTCTTCTCTTCCTCATCTTCT
TCCAGGTTTAGCCCCTCTTTGGTGGCTGAGACAAGCTTCTTTCCATCGTA
CTCTTTCAACTGACCAACAGCAT
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