CK938804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH2_BRANA (Thioredoxin H-type 2 OS=Brassica napus GN=THL-2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.579e-29 Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKK-LPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 GQVIGCH ++ W QL + ++ +L+V+DFTASW PCR IAP A LAKK + + +F KVDVDEL++VA ++ VEAMPTF+ +K+G +VDKVVGA+KE+L Sbjct: 6 GQVIGCHEIDVWAVQLDTAKQSNKLIVIDFTASWCPPCRMIAPVFADLAKKFMSSAIFFKVDVDELQNVAQEFGVEAMPTFVLIKDGNVVDKVVGARKEDL 106
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 G VI CH + ++ Q+ K+ E ++V++DFTASW GPCRFIAP A+ AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++L Sbjct: 6 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDL 105
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.675e-29 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 G VI CH + ++ Q+ K+ E ++V++DFTASW GPCRFIAP A+ AKK P +FLKVDVDELK VA + VEAMPTF+F+K+G DKVVGA+K++L Sbjct: 6 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDL 105
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH_BRARA (Thioredoxin H-type OS=Brassica rapa GN=PEC-2 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28 Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP +LAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE+ Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAKEFDVQAMPTFVYMKGEEKLDKVVGAAKEEI 110
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH_BRAOL (Thioredoxin H-type OS=Brassica oleracea GN=BOPC17 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28 Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP +LAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE+ Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEI 110
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH1_BRANA (Thioredoxin H-type 1 OS=Brassica napus GN=THL-1 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.168e-28 Identity = 57/100 (57.00%), Postives = 78/100 (78.00%), Query Frame = 2 Query: 113 GQVIGCHTVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 G+VI CHTVE WN +L+ + E+ +L+V+DFTA W PCRFIAP +LAKK +V+F KVDVDEL +VA ++ V+AMPTF+++K + +DKVVGA KEE+ Sbjct: 11 GEVIACHTVEDWNNKLKAAKESNKLIVIDFTAVWCPPCRFIAPIFVELAKKHLDVVFFKVDVDELATVAQEFDVQAMPTFVYMKGEEKLDKVVGAAKEEI 110
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.037e-20 Identity = 41/93 (44.09%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 134 TVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 T E+W+++L +++ ++VV +F+A+W GPC+ +APF +L++K +++FL VDVDEL ++ W ++A PTF FLK G+ + K+VGA K EL Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPEL 122
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.966e-20 Identity = 40/93 (43.01%), Postives = 67/93 (72.04%), Query Frame = 2 Query: 134 TVEAWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 T E W+++L +++ ++V+ +F+A W GPC+ IAP+ +L++ P+++FL +DVDEL + W ++A PTF FL++G+ VDK+VGA K EL Sbjct: 31 TKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPEL 123
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: TRXH2_ARATH (Thioredoxin H-type 2 OS=Arabidopsis thaliana GN=TRX2 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.969e-19 Identity = 43/89 (48.31%), Postives = 63/89 (70.79%), Query Frame = 2 Query: 146 WNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 W + E+ +L+VVDF+ASW GPCR I P + +A K +V F+K+DVDEL VA ++ V AMPTF+ +K GK +++++GAKK+EL Sbjct: 36 WQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDEL 124
BLAST of CK938804 vs. ExPASy Swiss-Prot
Match: THIO_HORSE (Thioredoxin OS=Equus caballus GN=TXN PE=3 SV=3) HSP 1 Score: 90.8929 bits (224), Expect = 2.176e-18 Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 143 AWNEQLQKSNETKQLVVVDFTASWGGPCRFIAPFLAKLAKKLPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEEL 412 A+ E L + E +LVVVDF+A+W GPC+ I PF L++K NV+FL+VDVD+ + VA + V+ MPTF F K+G+ VD+ GA KE+L Sbjct: 10 AFQEALNSAGE--KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVAAECEVKCMPTFQFFKKGQKVDEFSGANKEKL 97 The following BLAST results are available for this feature:
BLAST of CK938804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938804 ID=CK938804; Name=CK938804; organism=Citrus sinensis; type=EST; length=412bpback to top |