CK938802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938802 vs. ExPASy Swiss-Prot
Match: RS11_PYRIL (30S ribosomal protein S11P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps11p PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.252e-22 Identity = 53/112 (47.32%), Postives = 72/112 (64.29%), Query Frame = 1 Query: 163 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPXXXXXXXXXXXXGMKFGRIEDVTPIPTDS 498 +G+A I++S N+T I +TDL+G ET+ R++GGM V+AD+D+ SP+AAM AA + GI A+HIK+R GG K PGP G+ GRIEDVTPIP D+ Sbjct: 16 WGIAWIYSSSNNTIITITDLTGAETVARVSGGMVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLIIGRIEDVTPIPHDT 127
BLAST of CK938802 vs. ExPASy Swiss-Prot
Match: RS11_PYRAR (30S ribosomal protein S11P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps11p PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 163 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPXXXXXXXXXXXXGMKFGRIEDVTPIPTD 495 +G+A I++S N+T I +TDL+G ET+ R++GG V+AD+D+ SP+AAM AA + GI A+HIK+R GG K PGP G+ GRIEDVTPIP D Sbjct: 15 WGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLAMARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 125
BLAST of CK938802 vs. ExPASy Swiss-Prot
Match: RS11_PYRAE (30S ribosomal protein S11P OS=Pyrobaculum aerophilum GN=rps11p PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.236e-21 Identity = 52/111 (46.85%), Postives = 70/111 (63.06%), Query Frame = 1 Query: 163 FGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRATGGNKTKTPGPXXXXXXXXXXXXGMKFGRIEDVTPIPTD 495 +G+A I++S N+T I +TDL+G ET+ R++GG V+AD+D+ SP+AAM AA + GI A+HIK+R GG K PGP G+ GRIEDVTPIP D Sbjct: 10 WGIAWIYSSSNNTIITITDLTGAETVARVSGGQVVRADKDKPSPWAAMQAAYKAAQLALARGINAVHIKVRGPGGYGMKVPGPGASAAIRALARSGLVIGRIEDVTPIPHD 120
BLAST of CK938802 vs. ExPASy Swiss-Prot
Match: RS14_TOBAC (40S ribosomal protein S14 (Fragment) OS=Nicotiana tabacum GN=RPS14 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15 Identity = 41/55 (74.55%), Postives = 41/55 (74.55%), Query Frame = 1 Query: 337 KELGITALHIKLRATGGNKTKTPGPXXXXXXXXXXXXGMKFGRIEDVTPIPTDST 501 KELGI ALHIKLRATGGNKTKTPGP GMK GRIEDVTPIPTDST Sbjct: 1 KELGINALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 55 The following BLAST results are available for this feature:
BLAST of CK938802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938802 ID=CK938802; Name=CK938802; organism=Citrus sinensis; type=EST; length=764bpback to top |