CN187890

Overview
NameCN187890
Unique NameCN187890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_PROM4 (Enolase OS=Prochlorococcus marinus (strain MIT 9211) GN=eno PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.732e-43
Identity = 85/144 (59.03%), Postives = 112/144 (77.78%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIED   +DDWE +  LT E+GEKVQ+VGDDL VTN  R+++ I +K  N++L KVNQIGS+TE+++A+ ++ ++G+  + SHRSGETEDT IADLSV    GQIKTG+  RSER+AKYNQLLRIE+ELG+EA YAG+    P+
Sbjct:  285 SIEDGLAEDDWEGWGLLTKELGEKVQLVGDDLFVTNTSRLQRGINQKVANSILIKVNQIGSLTETLQAIDLANRSGYTSVISHRSGETEDTTIADLSVATRAGQIKTGSLSRSERVAKYNQLLRIEDELGSEATYAGSNDLGPL 428          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_FRASC (Enolase OS=Frankia sp. (strain CcI3) GN=eno PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.569e-43
Identity = 87/138 (63.04%), Postives = 108/138 (78.26%), Query Frame = -1
Query:  268 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA 681
            SIEDP  +DDW+ +  LT  +G KVQ+VGDDL VTNP+R+ + I  K  NALL KVNQIG++TE+++AV ++ ++G+  M SHRSGETEDT IADL+V +  GQIKTGAP RSER+AKYNQLLRIEEEL   A YAGA
Sbjct:  280 SIEDPLAEDDWDGWVALTERLGGKVQLVGDDLFVTNPERLARGIALKAANALLVKVNQIGTLTETLDAVNLAHRSGYRAMMSHRSGETEDTTIADLAVAVDCGQIKTGAPARSERVAKYNQLLRIEEELDDAARYAGA 417          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_SALTO (Enolase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 85/138 (61.59%), Postives = 108/138 (78.26%), Query Frame = -1
Query:  268 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA 681
            SIEDP  +DDW  +  LT+ VG+++QIVGDDL VTNP+R+ + I E   N++L KVNQIGS+TE+++AV ++ +AG+  M SHRSGETEDT IADL+V    GQIKTGAP RS+R+AKYNQLLRIEEEL   A YAG+
Sbjct:  281 SIEDPLAEDDWSGWRTLTASVGDRIQIVGDDLFVTNPQRIARGIAENAANSVLVKVNQIGSLTETLDAVDLAHRAGFRCMMSHRSGETEDTTIADLAVATGCGQIKTGAPARSDRVAKYNQLLRIEEELADAARYAGS 418          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_ARTS2 (Enolase OS=Arthrobacter sp. (strain FB24) GN=eno PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43
Identity = 85/137 (62.04%), Postives = 108/137 (78.83%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIEDP D++DWE +  LT  +G+KVQ+VGDDL VTNP  +++ I   T N+LL KVNQIGS+TE+++AV ++++AG+  + SHRSGETEDT IAD++V    GQIKTGAP RSER+AKYNQLLRIEEEL   A YAG
Sbjct:  281 SIEDPLDENDWEGWKTLTDAIGDKVQLVGDDLFVTNPSILQRGIDTATANSLLVKVNQIGSLTETLDAVSLAQRAGYTTITSHRSGETEDTTIADIAVATNAGQIKTGAPARSERVAKYNQLLRIEEELDDAARYAG 417          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_TROWT (Enolase OS=Tropheryma whipplei (strain Twist) GN=eno PE=3 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIEDP DQDDWE Y  LT+ +G++VQIVGDDL VTN  R+ + I+    N++L KVNQIG++TE+ +AV M+ + G+  + SHRSGETEDT IAD++V    GQIKTGAP R ER+AKYNQLLRIEE+LG  A YAG
Sbjct:  282 SIEDPLDQDDWEGYRTLTTHIGDRVQIVGDDLFVTNTSRLSRGIQSGVANSILVKVNQIGTLTETFDAVDMAAKGGYTAVLSHRSGETEDTTIADMAVATNCGQIKTGAPARGERIAKYNQLLRIEEKLGRSARYAG 418          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_TROW8 (Enolase OS=Tropheryma whipplei (strain TW08/27) GN=eno PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIEDP DQDDWE Y  LT+ +G++VQIVGDDL VTN  R+ + I+    N++L KVNQIG++TE+ +AV M+ + G+  + SHRSGETEDT IAD++V    GQIKTGAP R ER+AKYNQLLRIEE+LG  A YAG
Sbjct:  282 SIEDPLDQDDWEGYRTLTTHIGDRVQIVGDDLFVTNTSRLSRGIQSGVANSILVKVNQIGTLTETFDAVDMAAKGGYTAVLSHRSGETEDTTIADMAVATNCGQIKTGAPARGERIAKYNQLLRIEEKLGRSARYAG 418          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_PSE14 (Enolase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=eno PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 84/142 (59.15%), Postives = 115/142 (80.99%), Query Frame = -1
Query:  259 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 681
            SIED  D+ DW+ +  LT ++GEKVQ+VGDDL VTN K +++ I +K  N++L K NQIGS+TE++EA++M+K AG+  + SHRSGETED+ IADL+VG + GQIKTG+ CRS+R++KYNQLLRIEE+LG++A Y G A+FR
Sbjct:  286 SIEDGLDESDWDGWKVLTDKIGEKVQLVGDDLFVTNTKILKEGIDKKIANSILIKFNQIGSLTETLEAIQMAKAAGYTAIISHRSGETEDSTIADLAVGTSAGQIKTGSLCRSDRVSKYNQLLRIEEQLGSKAAYRGRAEFR 427          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO1_METCA (Enolase 1 OS=Methylococcus capsulatus GN=eno1 PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.950e-43
Identity = 79/133 (59.40%), Postives = 110/133 (82.71%), Query Frame = -1
Query:  283 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEA 681
            SIED   ++DW+ + + T+ +GEK+QIVGDDLLVTN + +++AI+EK+CNA+L K+NQIG+VTE++EA+ + ++AGWG + SHRSGETEDTF+AD +V +  GQIKTG+ CRSER+AKYN+LL IE +LG  A
Sbjct:  285 SIEDGLAENDWDGFREHTAVLGEKIQIVGDDLLVTNTRFIQRAIEEKSCNAVLIKLNQIGTVTETVEAIHLCRKAGWGFVISHRSGETEDTFMADFAVAMGGGQIKTGSVCRSERMAKYNRLLEIESDLGKAA 417          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_THEAB (Enolase OS=Thermosipho africanus (strain TCF52B) GN=eno PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.038e-42
Identity = 88/137 (64.23%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIEDPFDQ+DWE Y K   EVG KVQIVGDDL VTN KR++K I+ K  N++L K+NQIGSVTE++ A+ ++K      + SHRSGETEDTFIADL+V    G IKTG+  RSER+AKYNQLLRIEEELG  A Y G
Sbjct:  284 SIEDPFDQEDWEAYQKFNKEVGNKVQIVGDDLYVTNVKRLQKGIELKASNSILIKLNQIGSVTETLNAIELAKTNNMTNVISHRSGETEDTFIADLAVATNAGLIKTGSLSRSERIAKYNQLLRIEEELGDVAQYRG 420          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_PSEPW (Enolase OS=Pseudomonas putida (strain W619) GN=eno PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.356e-42
Identity = 86/142 (60.56%), Postives = 115/142 (80.99%), Query Frame = -1
Query:  259 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG-AKFR 681
            SIED  D+ DW  +  LT ++GEKVQ+VGDDL VTN K +++ I++   N++L K NQIGS+TE++EA++M+K AG+  + SHRSGETED+ IADL+VG A GQIKTG+ CRS+R++KYNQLLRIEE+LGA+AVY G A+FR
Sbjct:  287 SIEDGLDESDWAGWKILTDKIGEKVQLVGDDLFVTNTKILKEGIEKGIGNSILIKFNQIGSLTETLEAIQMAKAAGYTAVISHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEEQLGAKAVYRGRAEFR 428          
The following BLAST results are available for this feature:
BLAST of CN187890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_PROM42.732e-4359.03Enolase OS=Prochlorococcus marinus (strain MIT 921... [more]
ENO_FRASC3.569e-4363.04Enolase OS=Frankia sp. (strain CcI3) GN=eno PE=3 S... [more]
ENO_SALTO4.661e-4361.59Enolase OS=Salinispora tropica (strain ATCC BAA-91... [more]
ENO_ARTS24.661e-4362.04Enolase OS=Arthrobacter sp. (strain FB24) GN=eno P... [more]
ENO_TROWT7.950e-4361.31Enolase OS=Tropheryma whipplei (strain Twist) GN=e... [more]
ENO_TROW87.950e-4361.31Enolase OS=Tropheryma whipplei (strain TW08/27) GN... [more]
ENO_PSE147.950e-4359.15Enolase OS=Pseudomonas syringae pv. phaseolicola (... [more]
ENO1_METCA7.950e-4359.40Enolase 1 OS=Methylococcus capsulatus GN=eno1 PE=3... [more]
ENO_THEAB1.038e-4264.23Enolase OS=Thermosipho africanus (strain TCF52B) G... [more]
ENO_PSEPW1.356e-4260.56Enolase OS=Pseudomonas putida (strain W619) GN=eno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187890 ID=CN187890; Name=CN187890; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTTTTTTTTTAGCACCGCAACTAGATACTCATTTTAATAAAAC
ATGCTCTAGGAAATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAAACAA
AAACTGTGTCAAAATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAA
AACCCATAAAAATCCATTTTACATAACTTATTGAAGTAAACCTCCATTGC
TCAAATCCAGCACCACACCAAATCAGCATCTCAAACTCTAGTAGGGTTCA
ACAGGGGCACGGAACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTC
TTCTTCAATTCTCAAAAGCTGATTATACTTTGCAAGACGCTCTGACCTGC
ATGGGGCTCCTGTCTTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCG
GCAATGAAAGTATCTTCAGTCTCACCACTGCGGTGGCTGGCCATCACACC
CCACCCAGCTTGCTTGGACATTCTGACGGCTTCAATGCTCTCAGTTACAG
ATCCAATTTGATTAACCTTGAAAAGGAGGGCGTTGCAGGTCTTCTCTTTG
ATAGCCTTCTCAACCCTCTTAGGATTGGTGACCAAAAGATCATCTCCAAC
AATTTGTACTTTTTCTCCAACCTCACTGGTTAGCTTGGCATAGTGCTCCC
AGTCGTCTTGGTCAAATGGATCTTCAATTGA
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