CN187890

Overview
NameCN187890
Unique NameCN187890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9095 contig Csv1_Contig9095:55..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_CHLRE (Enolase (Fragment) OS=Chlamydomonas reinhardtii GN=ENO PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.112e-55
Identity = 109/141 (77.30%), Postives = 122/141 (86.52%), Query Frame = -1
Query:  259 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 681
            SIEDPF+QDDWE  AKLT+E     Q+VGDD+LVTNP RV+KAI  K  NALL KVNQIG++TESIEAVRM+K+AGWGVM SHRSGETED+FIADL+VGLA+GQIKTGAPCRSER AKYNQLLRIEEELG  AVYAG  +R
Sbjct:  230 SIEDPFEQDDWEPCAKLTTE--NICQVVGDDILVTNPVRVKKAIDAKAVNALLLKVNQIGTITESIEAVRMAKEAGWGVMTSHRSGETEDSFIADLAVGLASGQIKTGAPCRSERNAKYNQLLRIEEELGENAVYAGESWR 368          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_BOVIN (Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4)

HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55
Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIEDPFDQDDWE + K T+  G  +Q+VGDDL VTNPKR+ KA+ EK+CN LL KVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKT APCRSERLAKYNQ+LRIEEELG++A +AG  FR P+
Sbjct:  291 SIEDPFDQDDWEAWQKFTASAG--IQVVGDDLTVTNPKRIAKAVSEKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTVAPCRSERLAKYNQILRIEEELGSKAKFAGRSFRNPL 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_ALLMI (Alpha-enolase OS=Alligator mississippiensis PE=2 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 5.308e-55
Identity = 103/143 (72.03%), Postives = 120/143 (83.92%), Query Frame = -1
Query:  253 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 681
            SIEDPFDQDDW  + K T+ VG  +Q+VGDDL VTNPKR+ KA+ +K CN LL KVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG++A +AG  FR P
Sbjct:  291 SIEDPFDQDDWAAWKKFTASVG--IQVVGDDLTVTNPKRIAKAVDDKACNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSKARFAGRNFRNP 431          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_TRASC (Alpha-enolase OS=Trachemys scripta PE=2 SV=3)

HSP 1 Score: 213.772 bits (543), Expect = 6.932e-55
Identity = 103/143 (72.03%), Postives = 121/143 (84.62%), Query Frame = -1
Query:  253 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 681
            S+EDPFDQDDW  + K T+ VG  VQ+VGDDL VTNPKR+ K ++EK+CN LL +VNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG++A +AG  FR P
Sbjct:  291 SVEDPFDQDDWSAWKKFTATVG--VQVVGDDLTVTNPKRIAKPVEEKSCNCLLLQVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKARFAGRNFRNP 431          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_RAT (Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV=4)

HSP 1 Score: 213.772 bits (543), Expect = 6.932e-55
Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIEDPFDQDDW+ + K T+  G  +Q+VGDDL VTNPKR+ KA  EK+CN LL KVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG++A +AG  FR P+
Sbjct:  291 SIEDPFDQDDWDAWQKFTATAG--IQVVGDDLTVTNPKRIAKAAGEKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSKAKFAGRSFRNPL 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_PONAB (Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.932e-55
Identity = 103/144 (71.53%), Postives = 121/144 (84.03%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIEDPFDQDDW  + K T+  G  +Q+VGDDL VTNPKR+ KA+ EK+CN LL KVN+IGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG++A +AG  FR P+
Sbjct:  291 SIEDPFDQDDWGAWQKFTASAG--IQVVGDDLTVTNPKRIAKAVNEKSCNCLLLKVNRIGSVTESLQACKLAQANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGRNFRNPL 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_MOUSE (Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3)

HSP 1 Score: 213.386 bits (542), Expect = 9.054e-55
Identity = 103/144 (71.53%), Postives = 120/144 (83.33%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIEDPFDQDDW  + K T+  G  +Q+VGDDL VTNPKR+ KA  EK+CN LL KVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG++A +AG  FR P+
Sbjct:  291 SIEDPFDQDDWGAWQKFTASAG--IQVVGDDLTVTNPKRIAKAASEKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSKAKFAGRSFRNPL 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_MACFA (Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 9.054e-55
Identity = 103/144 (71.53%), Postives = 120/144 (83.33%), Query Frame = -1
Query:  250 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPV 681
            SIEDPFDQDDW  + K T+  G  +Q+VGDDL V NPKR+ KA+ EK+CN LL KVNQIGSVTES++A ++++  GWGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQLLRIEEELG++A +AG  FR P+
Sbjct:  291 SIEDPFDQDDWGAWQKFTASAG--IQVVGDDLTVANPKRIAKAVNEKSCNCLLLKVNQIGSVTESLQACKLAQANGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKYNQLLRIEEELGSKAKFAGRNFRNPL 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_HOMGA (Enolase OS=Homarus gammarus PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = -1
Query:  253 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAP 681
            SIEDPFDQDDWE ++K+TS  G  +QIVGDDL VTNPKR+  A+++K C  LL KVNQIGSVTESI+A  ++K+ GWG M SHRSGETED FIADL VGL TGQIKTGAPCRSERLAKYNQ+LRIEEELG+ A +AG  FRAP
Sbjct:  292 SIEDPFDQDDWETWSKMTS--GTTIQIVGDDLTVTNPKRITTAVEKKACKCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDCFIADLVVGLCTGQIKTGAPCRSERLAKYNQILRIEEELGSGAKFAGKNFRAP 432          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENOA_DICDI (Enolase A OS=Dictyostelium discoideum GN=enoA PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.493e-54
Identity = 107/141 (75.89%), Postives = 115/141 (81.56%), Query Frame = -1
Query:  259 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR 681
            SIEDPFDQDDWE Y KLT+ V   +QIVGDDLLVTNP+R++  I++K CNALL KVNQIGSVTESI A   SK A WGVM SHRSGETEDTFIADL VGL TGQIKTGAPCRSERLAKYNQL+RI EELG    YAG  FR
Sbjct:  294 SIEDPFDQDDWESYTKLTASVD--IQIVGDDLLVTNPERIKTGIEKKACNALLLKVNQIGSVTESIRAALDSKNASWGVMVSHRSGETEDTFIADLVVGLGTGQIKTGAPCRSERLAKYNQLVRINEELGENHNYAGLTFR 432          
The following BLAST results are available for this feature:
BLAST of CN187890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_CHLRE3.112e-5577.30Enolase (Fragment) OS=Chlamydomonas reinhardtii GN... [more]
ENOA_BOVIN5.308e-5571.53Alpha-enolase OS=Bos taurus GN=ENO1 PE=1 SV=4[more]
ENOA_ALLMI5.308e-5572.03Alpha-enolase OS=Alligator mississippiensis PE=2 S... [more]
ENOA_TRASC6.932e-5572.03Alpha-enolase OS=Trachemys scripta PE=2 SV=3[more]
ENOA_RAT6.932e-5571.53Alpha-enolase OS=Rattus norvegicus GN=Eno1 PE=1 SV... [more]
ENOA_PONAB6.932e-5571.53Alpha-enolase OS=Pongo abelii GN=ENO1 PE=2 SV=1[more]
ENOA_MOUSE9.054e-5571.53Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3[more]
ENOA_MACFA9.054e-5571.53Alpha-enolase OS=Macaca fascicularis GN=ENO1 PE=2 ... [more]
ENO_HOMGA4.493e-5472.73Enolase OS=Homarus gammarus PE=1 SV=1[more]
ENOA_DICDI4.493e-5475.89Enolase A OS=Dictyostelium discoideum GN=enoA PE=3... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005C20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187890 ID=CN187890; Name=CN187890; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTTTTTTTTTAGCACCGCAACTAGATACTCATTTTAATAAAAC
ATGCTCTAGGAAATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAAACAA
AAACTGTGTCAAAATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAA
AACCCATAAAAATCCATTTTACATAACTTATTGAAGTAAACCTCCATTGC
TCAAATCCAGCACCACACCAAATCAGCATCTCAAACTCTAGTAGGGTTCA
ACAGGGGCACGGAACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTC
TTCTTCAATTCTCAAAAGCTGATTATACTTTGCAAGACGCTCTGACCTGC
ATGGGGCTCCTGTCTTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCG
GCAATGAAAGTATCTTCAGTCTCACCACTGCGGTGGCTGGCCATCACACC
CCACCCAGCTTGCTTGGACATTCTGACGGCTTCAATGCTCTCAGTTACAG
ATCCAATTTGATTAACCTTGAAAAGGAGGGCGTTGCAGGTCTTCTCTTTG
ATAGCCTTCTCAACCCTCTTAGGATTGGTGACCAAAAGATCATCTCCAAC
AATTTGTACTTTTTCTCCAACCTCACTGGTTAGCTTGGCATAGTGCTCCC
AGTCGTCTTGGTCAAATGGATCTTCAATTGA
back to top