CN187890

Overview
NameCN187890
Unique NameCN187890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_ROSDO (Enolase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 79/137 (57.66%), Postives = 103/137 (75.18%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIED   +DDW+ +  LT  +G KVQ+VGDDL VTNP+R+   I+  + N++L KVNQIG++TE+++AV M+ +AG+  + SHRSGETED  IADL+V    GQIKTG+  RS+RLAKYNQL+RIEE LG  A YAG
Sbjct:  283 SIEDAMSEDDWDGWKALTDALGHKVQLVGDDLFVTNPERLATGIERGSANSMLVKVNQIGTLTETLKAVDMAHRAGFTNVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEALGETAEYAG 419          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_PSYCK (Enolase OS=Psychrobacter cryohalolentis (strain K5) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 73/131 (55.73%), Postives = 105/131 (80.15%), Query Frame = -1
Query:  289 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA 681
            SIED  D+ DW+ +  LT ++G+KVQ+VGDDL VTNP  +++ I +K  NA+L K NQIG+++E+++A+ ++K+ G+  + SHRSGETED+ IADL+VG A GQIKTG+ CRS+R+AKYNQLLRIE+++ A
Sbjct:  295 SIEDGLDESDWDGWKYLTEQIGDKVQLVGDDLFVTNPAILQEGIDKKIANAILIKFNQIGTLSETLDAIYLAKKNGYATVISHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVAKYNQLLRIEQQVRA 425          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_PARL1 (Enolase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 79/137 (57.66%), Postives = 100/137 (72.99%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIED   +DDWE +  LT  +G KVQ+VGDDL VTN +R+   I + T N++L KVNQIGS+TE++E+V M+ +A +  + SHRSGETED  IADL+V    GQIKTG+  RS+RLAKYNQL+RIEE LG    YAG
Sbjct:  282 SIEDGMAEDDWEGWKALTDRIGSKVQLVGDDLFVTNKRRLADGIAKGTANSILVKVNQIGSLTETLESVEMAHKASYTAVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRLAKYNQLIRIEEALGPSGEYAG 418          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_LACLM (Enolase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = -1
Query:  265 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 681
            +IED  D++DW+ +  LT  +G+KVQ+VGDD  VTN K +E+ I+E   NA+L KVNQIG++TE+ EA+ M+K+AG+  + SHRSGETED+ I+D++V    GQIKTG+  R++R+AKYNQLLRIE++L   A Y G K
Sbjct:  288 TIEDGMDENDWDGWKILTERLGKKVQLVGDDFFVTNTKYLERGIRENASNAILIKVNQIGTLTETFEAIEMAKEAGFTAIVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRMAKYNQLLRIEDQLAEVAQYKGLK 426          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_HAEDU (Enolase OS=Haemophilus ducreyi GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 78/139 (56.12%), Postives = 105/139 (75.54%), Query Frame = -1
Query:  265 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 681
            SIED  D+ DW+ +A  T  +G+KVQ+VGDDL VTN K +++ I++   N++L K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  289 SIEDGQDESDWDGFAYQTKILGDKVQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRIAKYNQLIRIEEALGEMAPFLGLK 427          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_ERWT9 (Enolase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 77/139 (55.40%), Postives = 104/139 (74.82%), Query Frame = -1
Query:  265 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 681
            SIED  D+ DW+ +A  T  +G+K+Q+VGDDL VTN K +++ I +   N++L K NQIGS+TE++ A++M+K AG+  + SHRSGETED  IADL+VG A GQIKTG+  RS+R+AKYNQL+RIEE LG  A + G K
Sbjct:  288 SIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIDKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGNRAPFNGLK 426          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_CLOTH (Enolase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 74/137 (54.01%), Postives = 105/137 (76.64%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            S+ED   ++DWE +  LT  +G+++Q+VGDDL VTN  R++K I+    N++L KVNQIG++TE+++A+ M+ +AG+  + SHRSGETED  IAD++V    GQIKTGAP R++R+AKYNQLLRIEEE+GA + Y G
Sbjct:  287 SLEDGVAEEDWEGWKMLTERLGKRIQLVGDDLFVTNTTRLKKGIELGVANSILIKVNQIGTLTETLDAIEMANRAGYTAVVSHRSGETEDATIADIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEEEIGAVSRYPG 423          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO_BREBN (Enolase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=eno PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 76/137 (55.47%), Postives = 104/137 (75.91%), Query Frame = -1
Query:  271 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAG 681
            SIED   +DDW+ +  LT ++G KVQ+VGDDL VTN +R+ + I+  T N++L KVNQIG++TE+ EA+ M+K AG+  + SHRSGETED+ I+D++V    GQIKTGAP R++R+AKYNQLLRIE+EL   A + G
Sbjct:  283 SIEDGLSEDDWDGWKALTDKLGSKVQLVGDDLFVTNTERLARGIETSTGNSILVKVNQIGTLTETFEAIEMAKLAGYTAVISHRSGETEDSTISDIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEDELADTARFGG 419          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO2_LACLS (Enolase 2 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=eno2 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = -1
Query:  265 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 681
            +IED  D++DW+ +  LT  +G+KVQ+VGDD  VTN K +E+ I+E   NA+L KVNQIG++TE+ EA+ M+K+AG+  + SHRSGETED+ I+D++V    GQIKTG+  R++R+AKYNQLLRIE++L   A Y G K
Sbjct:  288 TIEDGMDENDWDGWKILTERLGKKVQLVGDDFFVTNTKYLERGIRENASNAILIKVNQIGTLTETFEAIEMAKEAGFTAIVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRMAKYNQLLRIEDQLAEVAQYKGLK 426          
BLAST of CN187890 vs. ExPASy Swiss-Prot
Match: ENO1_LACLA (Enolase 1 OS=Lactococcus lactis subsp. lactis GN=eno1 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.456e-38
Identity = 75/139 (53.96%), Postives = 105/139 (75.54%), Query Frame = -1
Query:  265 SIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLFKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAK 681
            +IED  D++DW+ +  LT  +G+KVQ+VGDD  VTN K +E+ I+E   NA+L KVNQIG++TE+ EA+ M+K+AG+  + SHRSGETED+ I+D++V    GQIKTG+  R++R+AKYNQLLRIE++L   A Y G K
Sbjct:  288 TIEDGMDENDWDGWKILTERLGKKVQLVGDDFFVTNTKYLERGIRENASNAILIKVNQIGTLTETFEAIEMAKEAGFTAIVSHRSGETEDSTISDIAVATNAGQIKTGSLSRTDRMAKYNQLLRIEDQLAEVAQYKGLK 426          
The following BLAST results are available for this feature:
BLAST of CN187890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ENO_ROSDO3.456e-3857.66Enolase OS=Roseobacter denitrificans (strain ATCC ... [more]
ENO_PSYCK3.456e-3855.73Enolase OS=Psychrobacter cryohalolentis (strain K5... [more]
ENO_PARL13.456e-3857.66Enolase OS=Parvibaculum lavamentivorans (strain DS... [more]
ENO_LACLM3.456e-3853.96Enolase OS=Lactococcus lactis subsp. cremoris (str... [more]
ENO_HAEDU3.456e-3856.12Enolase OS=Haemophilus ducreyi GN=eno PE=3 SV=1[more]
ENO_ERWT93.456e-3855.40Enolase OS=Erwinia tasmaniensis (strain DSM 17950 ... [more]
ENO_CLOTH3.456e-3854.01Enolase OS=Clostridium thermocellum (strain ATCC 2... [more]
ENO_BREBN3.456e-3855.47Enolase OS=Brevibacillus brevis (strain 47 / JCM 6... [more]
ENO2_LACLS3.456e-3853.96Enolase 2 OS=Lactococcus lactis subsp. cremoris (s... [more]
ENO1_LACLA3.456e-3853.96Enolase 1 OS=Lactococcus lactis subsp. lactis GN=e... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005C20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187890 ID=CN187890; Name=CN187890; organism=Citrus sinensis; type=EST; length=681bp
TTTTTTTTTTTTTTTTTAGCACCGCAACTAGATACTCATTTTAATAAAAC
ATGCTCTAGGAAATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAAACAA
AAACTGTGTCAAAATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAA
AACCCATAAAAATCCATTTTACATAACTTATTGAAGTAAACCTCCATTGC
TCAAATCCAGCACCACACCAAATCAGCATCTCAAACTCTAGTAGGGTTCA
ACAGGGGCACGGAACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTC
TTCTTCAATTCTCAAAAGCTGATTATACTTTGCAAGACGCTCTGACCTGC
ATGGGGCTCCTGTCTTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCG
GCAATGAAAGTATCTTCAGTCTCACCACTGCGGTGGCTGGCCATCACACC
CCACCCAGCTTGCTTGGACATTCTGACGGCTTCAATGCTCTCAGTTACAG
ATCCAATTTGATTAACCTTGAAAAGGAGGGCGTTGCAGGTCTTCTCTTTG
ATAGCCTTCTCAACCCTCTTAGGATTGGTGACCAAAAGATCATCTCCAAC
AATTTGTACTTTTTCTCCAACCTCACTGGTTAGCTTGGCATAGTGCTCCC
AGTCGTCTTGGTCAAATGGATCTTCAATTGA
back to top