CN187889

Overview
NameCN187889
Unique NameCN187889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 309.301 bits (791), Expect = 1.041e-90
Identity = 150/193 (77.72%), Postives = 167/193 (86.53%), Query Frame = -3
Query:  268 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            A++NVAKP KG SVAIF            AR++GASRIIGVDLN SRF +AKKFGVTEFVNPKDY KPVQ+VIA+MT+GGVDRSVECTG + AMISAFECVHDGWGVAVLVGVP+K+  FKTHP+N LNERTLKGTFFGNYKPRSD+P VVEKYMNKELE+EKFITHT+PF+EINKAFDLML GE +RCII M
Sbjct:  186 ASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          

HSP 2 Score: 46.2098 bits (108), Expect = 1.041e-90
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            INP APLDKVCVLSCGISTG G  L
Sbjct:  164 INPLAPLDKVCVLSCGISTGLGASL 188          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 307.375 bits (786), Expect = 1.358e-90
Identity = 149/194 (76.80%), Postives = 166/194 (85.57%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NVAKP KG +VAIF            AR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  185 ATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          

HSP 2 Score: 47.7506 bits (112), Expect = 1.358e-90
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INPAAPLDKVCVLSCGISTG G
Sbjct:  163 INPAAPLDKVCVLSCGISTGLG 184          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 1.358e-90
Identity = 149/194 (76.80%), Postives = 166/194 (85.57%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NVAKP KG +VAIF            AR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  185 ATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          

HSP 2 Score: 47.7506 bits (112), Expect = 1.358e-90
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INPAAPLDKVCVLSCGISTG G
Sbjct:  163 INPAAPLDKVCVLSCGISTGLG 184          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 6.690e-90
Identity = 148/194 (76.29%), Postives = 168/194 (86.60%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            A++NVAKP KG +VA+F            AR++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM  GE IRCIIRM+
Sbjct:  185 ASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRME 378          

HSP 2 Score: 43.8986 bits (102), Expect = 6.690e-90
Identity = 19/22 (86.36%), Postives = 19/22 (86.36%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INP APLDKVCVLSCG STG G
Sbjct:  163 INPQAPLDKVCVLSCGYSTGLG 184          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.485e-89
Identity = 145/194 (74.74%), Postives = 170/194 (87.63%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NVAKP KG +VAIF            AR++GASRIIGVD+NP+++ +AKKFG TEFVNPKD+DKPVQ+V+ ++TNGGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVP+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  185 ATLNVAKPAKGSTVAIFGLGAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          

HSP 2 Score: 46.2098 bits (108), Expect = 1.485e-89
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            INP APLDKVC+LSCGISTG G  L
Sbjct:  163 INPEAPLDKVCILSCGISTGLGATL 187          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.937e-89
Identity = 150/194 (77.32%), Postives = 164/194 (84.54%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            A++NVAKP KG +VAIF            AR++GASRIIGVDLN  RF EA+KFG TEFVNPKD+ KPVQQV+ADMTNGGVDRSVECTG+V AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRMD
Sbjct:  185 ASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRMD 378          

HSP 2 Score: 45.8246 bits (107), Expect = 1.937e-89
Identity = 20/22 (90.91%), Postives = 20/22 (90.91%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INP APLDKVCVLSCGISTG G
Sbjct:  163 INPEAPLDKVCVLSCGISTGLG 184          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 2.527e-89
Identity = 146/194 (75.26%), Postives = 167/194 (86.08%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NV KPKKG +VA+F            AR++GASRIIGVDLN +RF EAKKFG+TEFVNPKD+ KPVQ+VIA++TNGGVDRS+ECTG++QAMI AFECVHDGWGVAVLVGVP+KD  F THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYMNKELEV+KFITH +PFS+INKAFD ML GE IRCII M+
Sbjct:  186 ATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITME 379          

HSP 2 Score: 45.0542 bits (105), Expect = 2.527e-89
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            INP +PLDKVC+LSCGISTG G  L
Sbjct:  164 INPQSPLDKVCILSCGISTGLGATL 188          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 290.812 bits (743), Expect = 4.725e-85
Identity = 139/181 (76.80%), Postives = 158/181 (87.29%), Query Frame = -3
Query:  304 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 846
            A++NVAKP KG +VA+F            AR++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM
Sbjct:  112 ASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 292          

HSP 2 Score: 45.8246 bits (107), Expect = 4.725e-85
Identity = 20/22 (90.91%), Postives = 20/22 (90.91%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INP APLDKVCVLSCGISTG G
Sbjct:   90 INPQAPLDKVCVLSCGISTGLG 111          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.838e-81
Identity = 147/194 (75.77%), Postives = 167/194 (86.08%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NVAKPKKG +VA+F            AR+SGASRIIGVDL+  RF EAKKFGVTEFVNPK ++KPVQ+VIA++TN GVDRS+ECTGS +AMISAFECVHDGWGVAVLVGVP+KD  FKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYMNKELE+EKFITH VPFSEINKAF+ ML GE +RCIIRM+
Sbjct:  186 ATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRME 379          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 1.456e-78
Identity = 138/194 (71.13%), Postives = 163/194 (84.02%), Query Frame = -3
Query:  265 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 846
            AT+NVAKPKKG +VAIF            AR++GASRIIGVDLNP+++ +AKKFG T+FVNPKD+ KPVQ+V+ +MTNGGVDR+VECTG + AMI+ FECVHDGWGVAVLVGVP+K+  FKTHPMN LNE+TLKGTFFGNYKPR+DLP VVE YM KEL++EKFITH+VPFS+IN AFDLML GE +RCI R D
Sbjct:  185 ATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTD 378          
The following BLAST results are available for this feature:
BLAST of CN187889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH2_SOLLC1.041e-9077.72Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_ORYSJ1.358e-9076.80Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI1.358e-9076.80Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH1_MAIZE6.690e-9076.29Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH2_MAIZE1.485e-8974.74Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH1_HORVU1.937e-8977.32Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH_FRAAN2.527e-8975.26Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_ZEALU4.725e-8576.80Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADH_MALDO1.838e-8175.77Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH3_HORVU1.456e-7871.13Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187889 ID=CN187889; Name=CN187889; organism=Citrus sinensis; type=EST; length=911bp
GGGGGGGGGGGGGGGCGAGACCCCCTTAGAAAACACTCTCTTTGTACGCC
ATATGCAGCAAGTCATCAAACAGAAAAACAAAACAAAAAAAGGGACTGTA
AGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCAAGTCAT
CAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAACTTGGAA
AATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGCAACAGC
AGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTCTCCCGC
AAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAG
TGATGAATTTCTCGACCTCCAACTCCTTGTTCATGTATTTTTCAACAACA
GAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAG
AGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCATCATCTT
TGTTTGGCACACCCACAAGCACAGCAACACCCCAACCATCGTGAACGCAT
TCAAATGCTGAAATCATGGCCTGGACGCTTCCAGTACATTCAACACTTCT
ATCCACTCCACCATTGGTCATGTCAGCAATCACCTGTTGAACAGGTTTGT
CATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTGGCTTCA
TTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGCCCCTGA
TACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTGCACCCAATCCAAAAA
TGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACATTAACAGTAGCCCAA
AACCTGTGGAGATTCCACAGCTAAGCACACAAACTTTGTCAAGAGGGGCA
GCAGGATTGAT
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