CN187889

Overview
NameCN187889
Unique NameCN187889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 8.320e-54
Identity = 88/194 (45.36%), Postives = 132/194 (68.04%), Query Frame = -3
Query:  271 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 852
            + A +N AK + G + A+F             +V+GASRIIG+DLN  +F +AK+FG TE ++P D+ KP+Q+V+ +MT+GGVD S EC G+V  M +A E  H GWGV+V+VGV        T P  L+  RT KGT FG +K    +P +V++YM+K+++V++F+THT+PF +IN+AF+LM AG+SIR +++
Sbjct:  179 YGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          

HSP 2 Score: 42.3578 bits (98), Expect = 8.320e-54
Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            IN +APLDKVC+L CG+STG+G  L
Sbjct:  159 INASAPLDKVCLLGCGVSTGYGAAL 183          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 2.403e-53
Identity = 88/195 (45.13%), Postives = 130/195 (66.67%), Query Frame = -3
Query:  268 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 852
            + A VN AK + G + A+F             +V+GASRIIG+D+N  +F +AK+FG TE +NP+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +INKAFDLM +G SIR +++M
Sbjct:  180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          

HSP 2 Score: 43.1282 bits (100), Expect = 2.403e-53
Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+P+APLDKVC+L CGISTG+G
Sbjct:  160 IDPSAPLDKVCLLGCGISTGYG 181          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.937e-53
Identity = 88/193 (45.60%), Postives = 128/193 (66.32%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A +N AK + G + A+F             + +GASRII +D+NP +F  AK+FG T+ VNPKD+ KPV+QV+ +MT+GGVD S EC G++  M +A E  H GWG +V++GV        T P  L+  RT KGT FG YK    +P +VE+YMNK+++V++F+THT+PF +I++ FDLM AG+SIR ++
Sbjct:  181 YGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVL 373          

HSP 2 Score: 37.3502 bits (85), Expect = 6.937e-53
Identity = 15/25 (60.00%), Postives = 19/25 (76.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            ++  APLDKVC+L C ISTG+G  L
Sbjct:  161 VHEKAPLDKVCLLGCAISTGYGAAL 185          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 184.111 bits (466), Expect = 2.611e-52
Identity = 85/195 (43.59%), Postives = 131/195 (67.18%), Query Frame = -3
Query:  268 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 852
            + A VN AK + G + A+F             +V+GASRIIG+D+N  +F +AK+FG +E ++P+D+ K +Q+V+ +MT+GGVD S EC G+V+ M SA E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K+++V++F+T  + F +IN+AFDLM +G+SIR +++M
Sbjct:  180 YGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          

HSP 2 Score: 43.1282 bits (100), Expect = 2.611e-52
Identity = 17/22 (77.27%), Postives = 21/22 (95.45%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+P+APLDKVC+L CGISTG+G
Sbjct:  160 IDPSAPLDKVCLLGCGISTGYG 181          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.403e-52
Identity = 88/193 (45.60%), Postives = 126/193 (65.28%), Query Frame = -3
Query:  268 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            A  N AK + G  VA+F            A+ +GASR+IG+D++  +F+ AK FGVTEFVNPK++DKP+QQV+ D+T+GGVD S EC G+V  M +A EC   GWG +V+VGV        T P  L+  R  KGT FG +K R+ +P +V+KYM KE++V+++ITH +  ++IN AF L+  G  +RC++ M
Sbjct:  187 AVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTEFVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAM 379          

HSP 2 Score: 40.817 bits (94), Expect = 3.403e-52
Identity = 16/22 (72.73%), Postives = 18/22 (81.82%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            INP APLDKVC+L CG+ TG G
Sbjct:  165 INPQAPLDKVCLLGCGVPTGLG 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 7.540e-52
Identity = 83/195 (42.56%), Postives = 129/195 (66.15%), Query Frame = -3
Query:  268 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 852
            + A +N AK + G + A+F             + +GASRII VD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ + T+GGVD S EC G+V+ M +A E  H GWGV+V+VGV    +   T P  L+  RT KGT FG +K    +P +V +YM+K++ V++F+T+T+ F +IN+AF+LM +G+SIR ++++
Sbjct:  180 YGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAGAGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKINVDEFVTNTLSFDQINEAFELMHSGKSIRTVVKI 374          

HSP 2 Score: 43.8986 bits (102), Expect = 7.540e-52
Identity = 18/25 (72.00%), Postives = 22/25 (88.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            I+P+APLDKVC+L CGISTG+G  L
Sbjct:  160 IDPSAPLDKVCLLGCGISTGYGAAL 184          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 8.895e-50
Identity = 88/193 (45.60%), Postives = 123/193 (63.73%), Query Frame = -3
Query:  268 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRM 846
            A  NVA  +KG SV IF            A++ GA++I+GVD+NP++  +AK FGVT+F+N  D  +P+ QVI  MT GG D S EC G      +A +   DGWG+ V +GVP        H    L+ ++LKGT FG +KP+SDLPS+++KYMNKE+ +++FITH + F EINKAF LM  G+ +RC++ M
Sbjct:  187 AAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          

HSP 2 Score: 35.8094 bits (81), Expect = 8.895e-50
Identity = 12/22 (54.55%), Postives = 18/22 (81.82%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            ++P APL K+C+LSCG++ G G
Sbjct:  165 VDPLAPLHKICLLSCGVAAGLG 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.511e-49
Identity = 84/193 (43.52%), Postives = 124/193 (64.25%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A +N A  +KG + A++             + +GA+RIIG+D+N S+F   KKFG+TEFVNPK + K VQ+V+ +MT+ GVD + EC G+V  M +A E  H GWG +V+VGV    +   T P  L+  R  KGT FG +K R  +P +V+ YMNK+L +++F++H + F +IN+AFDLM  GESIR ++
Sbjct:  182 YGAALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVL 374          

HSP 2 Score: 41.5874 bits (96), Expect = 1.511e-49
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            +NP A LDKVC+L CGISTG+G  L
Sbjct:  162 VNPKAALDKVCLLGCGISTGYGAAL 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.633e-48
Identity = 84/196 (42.86%), Postives = 124/196 (63.27%), Query Frame = -3
Query:  265 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 852
            F A VN AK + G + A+F               +GA RII VDLNP +F +AK FG T+FVNP D+ +P+ QV++ MTNGGVD S+EC G+V  M +A E    GWGV+VLVG  +  D   T P+ L+  RT KG+ FG +K +  +P +V+ Y++K++++++FITH +P   +N A DLM  G+ IR ++ ++
Sbjct:  181 FGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDV-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSLE 375          

HSP 2 Score: 41.5874 bits (96), Expect = 3.633e-48
Identity = 16/22 (72.73%), Postives = 20/22 (90.91%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+P+APLD VC+L CG+STGFG
Sbjct:  161 IDPSAPLDTVCLLGCGVSTGFG 182          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 1.366e-47
Identity = 86/196 (43.88%), Postives = 122/196 (62.24%), Query Frame = -3
Query:  271 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDY-DK-PVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIR 852
            + A +N AK + G + A++             + +GA +I G+D+NP +F  AKKFG T+FVNPKD  DK  +Q  + D+T+GG D + EC G+V  M SA E  H GWG +V++GV        T P  L+  R  KG+ FG ++  SD+P +VE Y+ K+L V++FITH +P S+IN+AFDLM  GESIR II+
Sbjct:  183 YGAALNTAKVEAGSTCAVWGLGAVGLAVGLGCKKAGAGKIYGIDINPDKFELAKKFGFTDFVNPKDVADKGSIQNYLIDLTDGGFDYTFECIGNVNTMRSALEATHKGWGTSVVIGVAGAGQEISTRPFQLVVGRVWKGSAFGGWRSVSDVPKLVEDYLKKDLLVDEFITHELPLSQINEAFDLMHKGESIRSIIK 378          

HSP 2 Score: 40.4318 bits (93), Expect = 1.366e-47
Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            IN  APL+KVC+L CGISTG+G  L
Sbjct:  163 INEKAPLEKVCLLGCGISTGYGAAL 187          
The following BLAST results are available for this feature:
BLAST of CN187889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADHX_UROHA8.320e-5445.36Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_RAT2.403e-5345.13Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHL_GADMO6.937e-5345.60Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADHX_MOUSE2.611e-5243.59Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_MAIZE3.403e-5245.60Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_RABIT7.540e-5242.56Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHL6_ARATH8.895e-5045.60Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_OCTVU1.511e-4943.52Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADH1_GADCA3.633e-4842.86Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADHX_DROME1.366e-4743.88Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187889 ID=CN187889; Name=CN187889; organism=Citrus sinensis; type=EST; length=911bp
GGGGGGGGGGGGGGGCGAGACCCCCTTAGAAAACACTCTCTTTGTACGCC
ATATGCAGCAAGTCATCAAACAGAAAAACAAAACAAAAAAAGGGACTGTA
AGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCAAGTCAT
CAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAACTTGGAA
AATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGCAACAGC
AGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTCTCCCGC
AAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAG
TGATGAATTTCTCGACCTCCAACTCCTTGTTCATGTATTTTTCAACAACA
GAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAG
AGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCATCATCTT
TGTTTGGCACACCCACAAGCACAGCAACACCCCAACCATCGTGAACGCAT
TCAAATGCTGAAATCATGGCCTGGACGCTTCCAGTACATTCAACACTTCT
ATCCACTCCACCATTGGTCATGTCAGCAATCACCTGTTGAACAGGTTTGT
CATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTGGCTTCA
TTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGCCCCTGA
TACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTGCACCCAATCCAAAAA
TGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACATTAACAGTAGCCCAA
AACCTGTGGAGATTCCACAGCTAAGCACACAAACTTTGTCAAGAGGGGCA
GCAGGATTGAT
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