CN187889

Overview
NameCN187889
Unique NameCN187889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_APTAU (Alcohol dehydrogenase 1 OS=Apteryx australis GN=ADH1 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 1.701e-41
Identity = 76/193 (39.38%), Postives = 115/193 (59.59%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A V  AK + G + A+F             + +GASRII +D+N  +F +AK+ G T+ VNPKD+ KP+ +V+ +MT  GVD S E  G  + M +A    H  +GV+V++GVP   +     PM L + RT KG+ FG +K +  +P +V  YM K+  +E  ITHT+PF +IN+ FDL+  G+SIR ++
Sbjct:  181 YGAAVQTAKVEPGSTCAVFGLGGVGLSVVMGCKAAGASRIIAIDINKDKFAKAKELGATDCVNPKDFTKPIHEVLMEMTGLGVDYSFEVIGHTETMAAALASCHFNYGVSVILGVPPAAEKISFDPMLLFSGRTWKGSVFGGWKSKDAVPKLVADYMEKKFVLEPLITHTLPFIKINEGFDLLRKGKSIRSVL 373          

HSP 2 Score: 36.1946 bits (82), Expect = 1.701e-41
Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I  AAPL+KVC++ CG STG+G
Sbjct:  161 IAAAAPLEKVCLIGCGFSTGYG 182          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.903e-41
Identity = 77/193 (39.90%), Postives = 112/193 (58.03%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + + VN  K K G + A+F             +V+GASRIIGVDLN  +F  AK+ G TE +NPKDY+ P+ +V+A MT+ GVD + E  G+   M SA    H G G  V+VG+          P+ +L  R L G  FG +K + D+P +V  Y+NK+ + +  ITH +PF +IN+ F+L+  G+SIR I+
Sbjct:  181 YGSAVNTGKVKPGSTCAVFGLGGVGLSVIIGCKVAGASRIIGVDLNSDKFTTAKECGATECINPKDYNIPIHEVLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          

HSP 2 Score: 35.039 bits (79), Expect = 4.903e-41
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+  APL+KVC++ CG STG+G
Sbjct:  161 IHEDAPLEKVCLIGCGFSTGYG 182          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 4.903e-41
Identity = 75/194 (38.66%), Postives = 116/194 (59.79%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A +N AK + G + A+F             + +GASRIIG+D+N  +F +AK+ G TE VNP DY KP+ +V+ DMT+G GV+ S E  G    M +A    H+ +G +V+VGVP         P+ L   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ +G+SIR ++
Sbjct:  180 YGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINKEKFPKAKELGATECVNPLDYKKPINEVLFDMTDGEGVEYSFEVIGRTDTMTAALASCHNNYGTSVIVGVPPSASQIAFDPLLLFTGRTWKGSVFGGWKSKDAVPRLVSDFMGKKFILDPLITHTMPFEKINEGFELLRSGKSIRTVL 373          

HSP 2 Score: 36.965 bits (84), Expect = 4.903e-41
Identity = 14/27 (51.85%), Postives = 21/27 (77.78%), Query Frame = -1
Query:  831 INPAAPLDKVCVLSCGISTGFGLLLMS 911
            I+ +APL+KVC++ CG STG+G  + S
Sbjct:  160 IDASAPLEKVCLIGCGFSTGYGAAINS 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1_GEOAT (Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH1 PE=2 SV=3)

HSP 1 Score: 152.91 bits (385), Expect = 6.388e-41
Identity = 76/193 (39.38%), Postives = 114/193 (59.07%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + + V V K  +G   A               + +GA+RII VD+N  +F +AK+ G TE VNP+DYDKP+ +V+ +MT+GGVD S E  G +   +SA  C  +  GV+V+VGVP    +    P  LL+ R+ KG  FG YK + D+P +V  +M K+  +E  IT+  P ++IN+ FDL+ AG+SIR ++
Sbjct:  181 YGSAVKVGKVARGSICACVWSGRVGLSAIIGCKAAGAARIIAVDINKDKFAKAKELGATECVNPQDYDKPIYEVLQEMTDGGVDFSFEVIGRLDTKVSALMCCQESHGVSVIVGVPPNAQSLTIDPKVLLSGRSWKGAVFGGYKGKDDVPKLVADFMAKKFPLEPLITNVFPLAKINEGFDLLRAGKSIRTVL 373          

HSP 2 Score: 36.1946 bits (82), Expect = 6.388e-41
Identity = 13/22 (59.09%), Postives = 19/22 (86.36%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+ A+PL+KVC++ CG STG+G
Sbjct:  161 IDAASPLEKVCLIGCGFSTGYG 182          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 8.323e-41
Identity = 78/197 (39.59%), Postives = 116/197 (58.88%), Query Frame = -3
Query:  274 ATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTN------GGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 846
            A +N AK + G    +F             R++GA  IIGVDLN  +   A+ FG+T F+NPK+ +  VQ+++ ++T       GG D S +CTG+V+ M  A EC H GWG ++++GV        T P  L+  R  KGT FG  + R+D+P +V+ YM+ ++E++  ITHT+   +INK FDLM AGESIR ++
Sbjct:  178 AVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGADMIIGVDLNDDKKPMAEHFGMTHFINPKNCENVVQEIV-NLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          

HSP 2 Score: 32.7278 bits (73), Expect = 8.323e-41
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = -1
Query:  837 APLDKVCVLSCGISTGFGLLL 899
            AP DK+C + CG++TG G ++
Sbjct:  160 APFDKICYIGCGVTTGIGAVI 180          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.084e-40
Identity = 74/200 (37.00%), Postives = 113/200 (56.50%), Query Frame = -3
Query:  265 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKP----VQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 852
            + A +N  K ++G +VA++            A+ +GA +I+G+DL  S+F  AK FG TE +NPK  + P     Q  + +  +GG D + EC G+V  M  A E  H GWGV+ ++GV        T P  L+  RT KGT FG +K    +P +V+ YMNK+L +++FITH     +IN AFD++  GES+R ++  +
Sbjct:  183 YGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAKFFGATECINPKSVELPEGKSFQAWLVEQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVLAFE 382          

HSP 2 Score: 40.0466 bits (92), Expect = 1.084e-40
Identity = 16/25 (64.00%), Postives = 21/25 (84.00%), Query Frame = -1
Query:  837 INPAAPLDKVCVLSCGISTGFGLLL 911
            +NP APL+KV +L CGISTG+G +L
Sbjct:  163 VNPEAPLEKVSLLGCGISTGYGAVL 187          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 3.125e-40
Identity = 76/193 (39.38%), Postives = 118/193 (61.14%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A +N AK   G + A+F             +++GASRII +D+N  +F +AK  G T+ +NP+D DKPVQ VI ++T GGVD S++C G+ Q + +A +C   GWG   +VG   K D      ++++  R++KGTFFG +K    +P++V  Y NK+ +++  +TH +PF +IN A DLM  G+SIR I+
Sbjct:  185 YGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGASRIIAIDINSEKFPKAKALGATDCLNPRDLDKPVQDVITELTGGGVDFSLDCAGTAQTLKAAVDCTVVGWGSCTVVGA--KVDEMNISTVDMILGRSVKGTFFGGWKSVDSVPNLVTDYKNKKFDLDLLVTHALPFDKINDAIDLMNQGKSIRTIL 375          

HSP 2 Score: 27.7202 bits (60), Expect = 3.125e-40
Identity = 8/22 (36.36%), Postives = 17/22 (77.27%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            ++  A L++VC++ CG ++G+G
Sbjct:  165 VDDEANLERVCLIGCGFTSGYG 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: FADH2_SCHPO (Putative S-(hydroxymethyl)glutathione dehydrogenase 2 OS=Schizosaccharomyces pombe GN=SPCC13B11.04c PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.072e-40
Identity = 75/193 (38.86%), Postives = 109/193 (56.48%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A    A  K+G SVA+F            A    A RI G+D+NP + N A  FG T+F+NP D   P+Q V+   T+GG+D + +CTG+V  M SA E  H GWG ++++GV        T P  L+  R  +G  FG  K RS LP +V++Y++ +LE++K+ITH  P  EIN+AF  M  G  I+ ++
Sbjct:  185 YGAATITADIKEGDSVAVFGLGSVGLAVIQGAVKKRAGRIFGIDVNPEKKNWAMSFGATDFINPNDLQSPIQDVLIHETDGGLDWTFDCTGNVHVMRSALEACHKGWGQSIVIGVAAAGQEISTRPFQLVTGRVWRGCAFGGVKGRSQLPDLVKEYLDHKLEIDKYITHRRPLKEINEAFTDMHNGNCIKTVL 377          

HSP 2 Score: 35.4242 bits (80), Expect = 4.072e-40
Identity = 14/22 (63.64%), Postives = 17/22 (77.27%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I   APLD VC+L CGI+TG+G
Sbjct:  165 IERLAPLDSVCLLGCGITTGYG 186          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH1A_UROHA (Alcohol dehydrogenase 1A OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 5.306e-40
Identity = 74/194 (38.14%), Postives = 112/194 (57.73%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNG-GVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            + A V  AK + G + A+F             + +GASRIIGVD+N  +F +AK+ G TE VNP DY KP+ +V+ D+T G GVD S E  G    M +A    H  +G +++VG+P         P  +   RT KG+ FG +K +  +P +V  +M K+  ++  ITHT+PF +IN+ F+L+ AG+SIR ++
Sbjct:  180 YGAAVETAKVEPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGVDINKDKFPKAKEMGATECVNPLDYKKPINEVLFDLTGGEGVDYSFEVIGRTDTMTAALASCHMDYGTSIIVGLPPSASEITFSPGLIFTGRTWKGSVFGGWKSKDSVPRLVSDFMQKKFSLDPLITHTMPFDKINEGFELLRAGKSIRSVL 373          

HSP 2 Score: 37.3502 bits (85), Expect = 5.306e-40
Identity = 14/22 (63.64%), Postives = 19/22 (86.36%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+ AAPL+KVC++ CG STG+G
Sbjct:  160 IDAAAPLEKVCLIGCGFSTGYG 181          
BLAST of CN187889 vs. ExPASy Swiss-Prot
Match: ADH6_PONAB (Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.381e-39
Identity = 71/193 (36.79%), Postives = 113/193 (58.55%), Query Frame = -3
Query:  274 FWATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCII 852
            F A +N AK   G + A+F             + +GA+RIIGVD+N  +F +A++ G TE +NP+D  KP+Q+V+ DMT+ G+D   E  G++  + +A    ++ +GV V+VG+       K       + R+LKG+ FG +K R  +P +V  YM K+L ++  ITHT+   +IN+A +LM  G+ IRCI+
Sbjct:  181 FGAAINTAKVTPGSTCAVFGLGGVGSSVVMGCKAAGATRIIGVDVNKEKFKKARELGATECLNPQDLKKPIQEVLFDMTDAGIDFCFEAIGNLDVLAAALASCNESYGVCVVVGLLPASVQLKISGQLFFSGRSLKGSVFGGWKSRQHIPKLVADYMAKKLNLDPLITHTLNLDKINEAVELMKTGKCIRCIL 373          

HSP 2 Score: 38.5058 bits (88), Expect = 3.381e-39
Identity = 15/22 (68.18%), Postives = 19/22 (86.36%), Query Frame = -1
Query:  846 INPAAPLDKVCVLSCGISTGFG 911
            I+  APL+KVC++SCG STGFG
Sbjct:  161 IDAVAPLEKVCLISCGFSTGFG 182          
The following BLAST results are available for this feature:
BLAST of CN187889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_APTAU1.701e-4139.38Alcohol dehydrogenase 1 OS=Apteryx australis GN=AD... [more]
ADH1_RANPE4.903e-4139.90Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
ADH1B_UROHA4.903e-4138.66Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH1_GEOAT6.388e-4139.38Alcohol dehydrogenase 1 OS=Geomys attwateri GN=ADH... [more]
FADH_PARDE8.323e-4139.59S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADHX_CAEEL1.084e-4037.00Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH4_RAT3.125e-4039.38Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
FADH2_SCHPO4.072e-4038.86Putative S-(hydroxymethyl)glutathione dehydrogenas... [more]
ADH1A_UROHA5.306e-4038.14Alcohol dehydrogenase 1A OS=Uromastyx hardwickii P... [more]
ADH6_PONAB3.381e-3936.79Alcohol dehydrogenase 6 OS=Pongo abelii GN=ADH6 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187889 ID=CN187889; Name=CN187889; organism=Citrus sinensis; type=EST; length=911bp
GGGGGGGGGGGGGGGCGAGACCCCCTTAGAAAACACTCTCTTTGTACGCC
ATATGCAGCAAGTCATCAAACAGAAAAACAAAACAAAAAAAGGGACTGTA
AGAAATATGTAGAAAACACAACTCTTTGAAAGCCATTCGCAGCAAGTCAT
CAAACATACAGCATAAATTACTTATTCTCGGGGTAATATATAACTTGGAA
AATTATGTGATCATCTTCATTCTGCCTCCATTAGATTGATCAGCAACAGC
AGACACATCTAACCATCCATGCGAATGATGCACCTAATGCTTTCTCCCGC
AAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGAAGGGCACAGTGTGAG
TGATGAATTTCTCGACCTCCAACTCCTTGTTCATGTATTTTTCAACAACA
GAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAAGAAGGTACCCTTAAG
AGTCCTCTCATTAAGCAGATTCATGGGATGAGTCTTGAATGCATCATCTT
TGTTTGGCACACCCACAAGCACAGCAACACCCCAACCATCGTGAACGCAT
TCAAATGCTGAAATCATGGCCTGGACGCTTCCAGTACATTCAACACTTCT
ATCCACTCCACCATTGGTCATGTCAGCAATCACCTGTTGAACAGGTTTGT
CATAATCTTTTGGATTCACAAACTCGGTAACCCCAAACTTCTTGGCTTCA
TTGAATCTGCTTGGGTTCAAATCAACACCAATGATCCTGGAAGCCCCTGA
TACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTGCACCCAATCCAAAAA
TGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACATTAACAGTAGCCCAA
AACCTGTGGAGATTCCACAGCTAAGCACACAAACTTTGTCAAGAGGGGCA
GCAGGATTGAT
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