CN187886

Overview
NameCN187886
Unique NameCN187886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3018 contig Csv1_Contig3018:587..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 261.922 bits (668), Expect = 2.715e-69
Identity = 127/235 (54.04%), Postives = 166/235 (70.64%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA VN AK + G   A+F             +V+GASRIIGVD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV
Sbjct:   61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV 294          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 261.151 bits (666), Expect = 4.630e-69
Identity = 126/235 (53.62%), Postives = 167/235 (71.06%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R    +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CG+STG+GA VN AK + G + AIF             +V+GASRIIGVD+N  +F +AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWGV+V+VGV
Sbjct:   61 FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV 294          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.760e-68
Identity = 123/235 (52.34%), Postives = 165/235 (70.21%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FP I GHE  GIVESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +R+   +GVM  DG SRF+ KGK + HF+GTSTFSEYTV     + KIN +APLDKVC+L CG+STG+GA +N AK + G + A+F             +V+GASRIIG+DLN  +F +AK+FG TE ++P D+ KP+Q+V+ +MT+GGVD S EC G+V  M +A E  H GWGV+V+VGV
Sbjct:   60 FPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLNKDKFAKAKEFGATECISPADFKKPIQEVLIEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGV 293          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.001e-68
Identity = 127/244 (52.05%), Postives = 162/244 (66.39%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSI---------KGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FPRI GHEA GIVESVGEGV D++ GD+V+P F GEC EC  C  EESN+C+   ++  + VM+NDG +RFS          + +PIYHF+ TSTF+EYTV    CV KI+P +PL ++ +LSCG+STG GA  N+A  K+G+S A+F             R  GASRIIGVD N S+F + K  GVT+F+NPKD  KPV Q+I ++T GGVD S ECTG+V  +  AF   H GWG  VLVG+
Sbjct:   65 FPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFEKGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTVLVGI 308          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 258.07 bits (658), Expect = 3.920e-68
Identity = 123/235 (52.34%), Postives = 166/235 (70.64%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FP I GHE  GIVESVGEGVT+L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA +N AK + G + A+F             + +GASRII VD+N  +F  AK+FG TE +NP+D+ KP+Q+V+ + T+GGVD S EC G+V+ M +A E  H GWGV+V+VGV
Sbjct:   61 FPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAAIMGCKAAGASRIIAVDINKDKFARAKEFGATECINPQDFSKPIQEVLVEKTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGV 294          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.686e-68
Identity = 120/235 (51.06%), Postives = 165/235 (70.21%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            FP I GHE  G+VESVGEGVT  + GD V+P++  +C EC  C + ++N+C  +R+   RG+M  D  SRF+ KGK ++HF+GTSTFSEYTV     +A ++P APLDKVC+L CGISTG+GA +N AK + G + A+F             +V+GA+RIIGVD+NP +F +A +FG TE +NPKD+ +PVQ+V+ +MT+GGVD S EC G+V+ M SA E  H GWG +V++GV
Sbjct:   62 FPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGATECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHKGWGESVIIGV 295          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.732e-68
Identity = 121/235 (51.49%), Postives = 167/235 (71.06%), Query Frame = 2
Query:   41 FPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            +P I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA +N AK + G + A+F             +++GA+RIIGVD+N  +F  AK+FG +E +NP+D+ KP+Q+V+ +MT+GGVD S EC G+V+ M +A E  H GWG++V+VGV
Sbjct:   61 YPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGV 294          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.173e-66
Identity = 117/236 (49.58%), Postives = 164/236 (69.49%), Query Frame = 2
Query:   38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            +FP I GHE  GIVES+GEGVT ++PGD V+P++  +C EC  C + ++N+C  +R+   +GVM  DG +RF+ KGK ++HF+G STFSE+TV     +AK+NP A LDKVC+L CGISTG+GA +N A  +KG + A++             + +GA+RIIG+D+N S+F   KKFG+TEFVNPK + K VQ+V+ +MT+ GVD + EC G+V  M +A E  H GWG +V+VGV
Sbjct:   62 IFPVILGHEGAGIVESIGEGVTSVKPGDTVIPLYVPQCYECKFCLNPKTNLCQKIRVTQGKGVM-PDGTTRFTCKGKEVFHFMGCSTFSEFTVVAEISIAKVNPKAALDKVCLLGCGISTGYGAALNTAAVEKGSNCAVWGLGAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGV 296          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 8.173e-66
Identity = 115/236 (48.73%), Postives = 162/236 (68.64%), Query Frame = 2
Query:   38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            +FP + GHE  GIVESVGEGVT  + GD V+P++  +C EC  C + ++N+C  +R+   +G+M N G SRFS  G+ ++HF+G+STFSEYTV     +AK++  APLDKVC+L C ISTG+GA +N AK + G + A+F             + +GASRII +D+NP +F  AK+FG T+ VNPKD+ KPV+QV+ +MT+GGVD S EC G++  M +A E  H GWG +V++GV
Sbjct:   61 VFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQGKGLMPN-GTSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAISTGYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGV 295          
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_PASPI (S-(hydroxymethyl)glutathione dehydrogenase OS=Pasteurella piscicida GN=frmA PE=3 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.067e-65
Identity = 118/236 (50.00%), Postives = 157/236 (66.53%), Query Frame = 2
Query:   38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745
            LFP + GHE  G+V  VGEGVT ++PGDHV+P++T EC EC  C S ++N+C  +R    +GVM  D  SRF + G+P+YH++G STFSEYTV     +AKINP A  ++VC+L CG++TG GA  N AK ++G SVA+F             R + A RI  +D NPS+F  AK+FG T+ +NP DYDKPVQQV+ +MT  GVD + EC G+V  M SA E  H GWG +V++GV
Sbjct:   55 LFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECDFCTSGKTNLCVAVRETQGKGVM-PDATSRFFVNGQPLYHYMGCSTFSEYTVVAEVSLAKINPQANAEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIFAIDTNPSKFELAKQFGATDCINPNDYDKPVQQVLVEMTKWGVDHTFECIGNVNVMRSALESAHRGWGQSVIIGV 289          
The following BLAST results are available for this feature:
BLAST of CN187886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
ADHX_HUMAN2.715e-6954.04Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_HORSE4.630e-6953.62Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_UROHA1.760e-6852.34Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHL3_ARATH3.001e-6852.05Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_RABIT3.920e-6852.34Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHH_GADMO6.686e-6851.06Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_BOVIN8.732e-6851.49Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_OCTVU8.173e-6649.58Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHL_GADMO8.173e-6648.73Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
FRMA_PASPI1.067e-6550.00S-(hydroxymethyl)glutathione dehydrogenase OS=Past... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005C17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005C17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187886 ID=CN187886; Name=CN187886; organism=Citrus sinensis; type=EST; length=765bp
GACGGTTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCA
TTTTTGGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTA
ACTGATCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTG
CAAGGAATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCC
TCAGGATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGA
TTCTCGATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTT
CAGTGAATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTG
CTGCCCCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGT
TTTGGGGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGC
CATTTTTGGATTGGGTGCAGTTGGCCTCGCTGCTGCCGAAGGGGCAAGGG
TATCAGGGGCTTCCAGGATCATTGGTGTTGATTTGAACCCAAGCAGATTC
AATGAAGCCAAGAAGTTTGGGGTTACCGAGTTTGTGAATCCAAAAGATTA
TGACAAACCTGTTCAACAGGTGATTGCTGACATGACCAATGGTGGAGTGG
ATAGAAGTGTTGAATGTACTGGAAGCGTCCAGGCCATGATTTCAGCATTT
GAATGCGTTCACGATGGTTGGGGTGTTGCTGTGCTTGTGGGTGTGCCAAA
CAAAGATGATGCATT
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