CN187886
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: ADH1G_HUMAN (Alcohol dehydrogenase 1C OS=Homo sapiens GN=ADH1C PE=1 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 4.959e-63 Identity = 118/239 (49.37%), Postives = 160/239 (66.95%), Query Frame = 2 Query: 32 TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVP 748 TPL P I GHEA GIVESVGEGVT ++PGD V+P+FT +C +C C + ESN C + RG + DG RF+ GKPI+HFVG STFS+YTV VAKI+ A+PL+KVC++ CG STG+G+ V VAK G + A+F + +GA+RII VD+N +F +AK+ G TE +NP+DY KP+Q+V+ +MT+GGVD S E G + M+++ C H+ G +V+VGVP Sbjct: 60 TPL-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTL-QDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVP 296
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_SHISS (S-(hydroxymethyl)glutathione dehydrogenase OS=Shigella sonnei (strain Ss046) GN=frmA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLI (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain K12) GN=frmA PE=1 SV=3) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOLC (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=frmA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOHS (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O9:H4 (strain HS) GN=frmA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECO57 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O157:H7 GN=frmA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECO24 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=frmA PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 1.105e-62 Identity = 110/236 (46.61%), Postives = 155/236 (65.68%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F+ A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFDLARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOUT (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain UTI89 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.443e-62 Identity = 110/236 (46.61%), Postives = 154/236 (65.25%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOL5 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=frmA PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.443e-62 Identity = 110/236 (46.61%), Postives = 154/236 (65.25%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289
BLAST of CN187886 vs. ExPASy Swiss-Prot
Match: FRMA_ECOK1 (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli O1:K1 / APEC GN=frmA PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.443e-62 Identity = 110/236 (46.61%), Postives = 154/236 (65.25%), Query Frame = 2 Query: 38 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGV 745 +FP + GHE G+V VGEGVT ++PGDHV+P++T EC EC C S ++N+C +R +G+M DG +RFS G+P+YH++G STFSEYTV +AKINP A + VC+L CG++TG GA N AK + G SVA+F R + A RII +D NP +F A++FG T+ +NP DYDKP++ V+ D+ G+D + EC G+V M +A E H GWG +V++GV Sbjct: 55 VFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLM-PDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPGDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTNPKKFELARRFGATDCINPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRAALESAHRGWGQSVIIGV 289 The following BLAST results are available for this feature:
BLAST of CN187886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187886 ID=CN187886; Name=CN187886; organism=Citrus sinensis; type=EST; length=765bpback to top |