CK938791

Overview
NameCK938791
Unique NameCK938791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:607..1387. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.139e-62
Identity = 125/186 (67.20%), Postives = 137/186 (73.66%), Query Frame = 3
Query:    9 PLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            PL  FGLKQS                   AKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDY+ DT+P  HPLEPY            TGVIN P+QF++PMVML  ++ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  171 PLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVML--ESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 354          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.027e-60
Identity = 118/186 (63.44%), Postives = 135/186 (72.58%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 563
            SPLSHFGL  S                   AKAMGHHVTVISSSDKK+ EA+EHLGAD Y+VSSD   MQ  ADSLDYIIDTVP  HPL+PY             GVINTP+QF+TP+V+LGRK I+GSFIGS+KET+E+L FC+EKG+TS IE +K+D +N AFERL KNDVRYRFVVDVAGS L
Sbjct:  171 SPLSHFGLMASGLKGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLADSLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGSNL 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.011e-59
Identity = 118/187 (63.10%), Postives = 133/187 (71.12%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL HFGL                      AKAMGHHVTVISSS KKR EAM+HLGAD YLVSSDA  M  AADSLDYIIDTVP +HPLEPY             GVI  P+ F++PMVMLGRKAITGSFIGS+ ET E+L+FC +KG+TS IEV+KM YVN+A ERLE+NDVRYRFVVDVAGS ++
Sbjct:  170 SPLKHFGLTNPGLRGGILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGSNVE 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.627e-59
Identity = 118/187 (63.10%), Postives = 133/187 (71.12%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL HFGL                      AK+MGHHVTVISSS +KR EAM+ LGAD YLVSSDA  M  A DSLDYIIDTVP +HPLEPY             GVIN P+ F++PMVMLGRKAITGSFIGSM ET+E+L FC +KG+TS IEV+KMDYVN+A ERLE+NDVRYRFVVDVAGS +D
Sbjct:  170 SPLKHFGLMSPGLRGGVLGLGGVGHMGVKVAKSMGHHVTVISSSARKRGEAMDDLGADAYLVSSDAAAMAAAGDSLDYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGSNID 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.702e-58
Identity = 115/187 (61.50%), Postives = 132/187 (70.59%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL HFGL                      AK+MGHHVTVISSSDKKR EAM+ LGAD YLVSSD  +M  A DSLDYIIDTVP  HPLEPY             GVI  P+ F++PMVMLGRK ITGSFIGS++ET+E+L FC +KG+TS IEV+KMDY+N+A ERLE+NDVRYRFVVDVAGS +D
Sbjct:  171 SPLKHFGLMTPGLRGGILGLGGVGHMGVKVAKSMGHHVTVISSSDKKRAEAMDDLGADDYLVSSDEAQMAAAMDSLDYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGSNID 357          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 8.449e-58
Identity = 116/187 (62.03%), Postives = 132/187 (70.59%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SPL  FGL                      AKAMGHHVTVISSS KKR EAM+HLGAD YLVSSDA  M  AADSLDYIIDTVP +HPLEPY             GVI  P+ F++PMVMLGRKAITGSFIGS+ ET E+L+FC +KG+TS IEV+KM YVN+A +RLE+NDVRYRFVVDVAGS ++
Sbjct:  170 SPLKAFGLTTPGLRGAILGLGGVGHMGVKVAKAMGHHVTVISSSSKKRAEAMDHLGADAYLVSSDAAAMAAAADSLDYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGSNVE 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.323e-54
Identity = 107/187 (57.22%), Postives = 130/187 (69.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SP+ HF + +                    AKA G HVTVISSSDKK+ EAME LGAD YLVS D  +M EAA+SLDYI+DT+P  HPLEPY             GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERLEKNDVRYRFVVDVAGSKLD
Sbjct:  170 SPMKHFAMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSKLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.649e-53
Identity = 106/187 (56.68%), Postives = 130/187 (69.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SP+ HFG+ +                    AKA G HVTVISSSDKK+ EA+E LGAD YLVS DA +MQEAA+SLDYI+DT+P  HPLEPY             GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERL KNDVRYRFVVDVA S LD
Sbjct:  170 SPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVAASNLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.813e-53
Identity = 106/187 (56.68%), Postives = 130/187 (69.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SP+ HFG+ +                    AKA G HVTVISSSDKK+ EA+E LGAD YLVS DA +MQEAA+SLDYI+DT+P  HPLEPY             GV+  P+ F+TP+++LGR++I GSFIGSM+ET+E L+FC EK V+SMIEV+ +DY+N A ERL KNDVRYRFVVDVA S LD
Sbjct:  170 SPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARSNLD 356          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH_PINTA (Probable cinnamyl alcohol dehydrogenase OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 8.184e-53
Identity = 105/187 (56.15%), Postives = 128/187 (68.45%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 566
            SP+ HF + +                    AKA G HVTVISSSDKK+ EAME LGAD YLVS D  +M EAA+SLDYI+DT+P  HPLEPY             GV+  P+ F+TP ++LGR++I GSFIG M+ET+E L+FC EK V+SMIEV+ +DY+N A ERLEKNDVRYRFVVDVAGS+LD
Sbjct:  170 SPMKHFAMTEPGKKCGILGLGGVGHLGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMMEAAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPPLILGRRSIAGSFIGGMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGSELD 356          
The following BLAST results are available for this feature:
BLAST of CK938791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH1_EUCGU1.139e-6267.20Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CADH4_ARATH9.027e-6063.44Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH_MAIZE2.011e-5963.10Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH2_ORYSJ2.627e-5963.10Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH_LOLPR1.702e-5861.50Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]
CADH_SACOF8.449e-5862.03Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH_PINRA3.323e-5457.22Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH7_PICAB1.649e-5356.68Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB2.813e-5356.68Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH_PINTA8.184e-5356.15Probable cinnamyl alcohol dehydrogenase OS=Pinus t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004438_D03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938791 ID=CK938791; Name=CK938791; organism=Citrus sinensis; type=EST; length=782bp
GGGTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGGGCTGAGAGGA
GGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTTTGATAGCTAA
GGCGATGGGACACCATGTTACTGTGATTAGCTCTTCTGATAAGAAAAGAG
TGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTTGTCAGCTCCGAC
GCAACTCGTATGCAAGAAGCCGCTGACTCACTTGATTATATCATTGATAC
CGTGCCCGCAAATCACCCTCTGGAGCCTTACCTTTCGCTGCTGAAGCTTG
ATGGAAAGTTGATCTTGACGGGTGTCATTAACACTCCCATGCAGTTTCTT
ACCCCTATGGTTATGCTTGGGAGAAAGGCAATCACGGGGAGCTTCATTGG
GAGCATGAAGGAGACAAAGGAAATGCTTGAATTCTGCCGAGAGAAGGGAG
TCACCTCCATGATTGAAGTGATCAAGATGGATTACGTTAACAAAGCATTC
GAGAGACTCGAAAAGAACGACGTTAGGTACAGATTCGTCGTGGACGTTGC
CGGAAGCAAACTCGATCCGTAGAGAAATTCAATTTTGGCATGATGCTCGT
TTTGTTTTTTGAGTGCCTTGTTTGGTTTTTATGCTTTCGTCGTTGGCCTA
ACCATATGTGGCTTCCGTGTTTACAATTTCTCCTAATAAGTTAAAAAAAA
AAAACAAGCTGAGGTGTTTACTGACAGTGTGTTAATTTAATCAGTATTTT
TTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top