CK938791

Overview
NameCK938791
Unique NameCK938791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length782
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:607..1387. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.229e-32
Identity = 76/184 (41.30%), Postives = 105/184 (57.07%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+ ++G+ +                     KA G  VTVIS+S  K  EA++ LGAD +LVS D  +M+ A  ++DYIIDT+ A H L P              G+ + P++     ++ GRK I GS IG MKET+EML+FC +  +T+ IE+IKM  +N A ERL K DV+YRFV+DVA S
Sbjct:  172 SPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANS 355          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.963e-32
Identity = 74/184 (40.22%), Postives = 104/184 (56.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+ +FGL                      AKA G  VTV+SS+  K  +A++ LGAD +LVS+D  +M+ A  ++D IIDTV A+H + P              G    P       ++LGRK+I GS IG M+ET+EM++F  E G+ + IE+I MDYVN A +RL K DVRYRFV+D++ +
Sbjct:  174 SPMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNT 357          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.358e-31
Identity = 75/184 (40.76%), Postives = 105/184 (57.07%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+ + GL +                    AKAMG  VTVIS+S++KR EA+  LGAD +LVS D  +M++A  ++D IIDTV A HPL P              G    P++     ++ GRK + GS +G +KET+EM++   +  +T+ IE+I  DYVN A ERL K DV+YRFV+DVA +
Sbjct:  169 SPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANT 352          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.317e-31
Identity = 75/184 (40.76%), Postives = 104/184 (56.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+ ++G+ +                     KA G  VTVISSS  K  EA++ LGAD +L+SSD  +M+ A  ++DYIIDT+ A H L                G+ + P+Q     ++ GRK I GS  G +KET+EML+FC +  + + IE+IKMD +N A ERL K DV+YRFV+DVA S
Sbjct:  165 SPMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANS 348          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.317e-31
Identity = 76/184 (41.30%), Postives = 104/184 (56.52%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+ + GL +                    AKAMG  VTVIS+S+KKR EA+  LGAD +LVS D  ++++A  ++D IIDTV A H L P              G    P++     ++  RK + GS IG +KET+EM++   +  +T+ IE+I  DYVN A ERLEK DVRYRFV+DVA +
Sbjct:  169 SPMKYHGLDKPGMHIGVVGLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANT 352          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH6_ORYSJ (Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza sativa subsp. japonica GN=CAD6 PE=2 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 7.454e-30
Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = 3
Query:   99 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAG-SKL 563
            KA G HVTVIS+S  K  EA E+L AD ++VS+D  +MQ    SLDYIIDTV A H L P              G    P++  +  ++ G++ ++GS  G MKET+EM++ C E  +T  IE++  D +N A  RL +NDVRYRFV++V G SKL
Sbjct:  205 KAFGLHVTVISTSPAKEREARENLKADNFVVSTDQKQMQAMTRSLDYIIDTVAATHSLGPILELLKVNGKLVLVGAPEKPVELPSFPLIFGKRTVSGSMTGGMKETQEMMDICGEHNITCDIEIVSTDRINDALARLARNDVRYRFVINVGGDSKL 360          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.832e-29
Identity = 76/184 (41.30%), Postives = 97/184 (52.72%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+  +GL                       KA G  VTVISSS  KR EA+  LGAD +L S D   M  AA ++D IIDTV A HPL P              G    P+Q     ++ G K + G+ +GS+ E + ML+F  E G+ + +EV+ MD VN A  RLE+NDVRYRFVVDVAG+
Sbjct:  168 SPMVEYGLNGPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKRGEALGRLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGT 351          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.241e-29
Identity = 72/185 (38.92%), Postives = 105/185 (56.76%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDK-KRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SPL ++GL +                    AK  G  +TVIS+S   K+ EA+++LGAD +LVS D  +M+   ++LD IIDTV A+H + P              G I  P++     ++LGRK + G+ +G +KET+EM++F  +  V   IEV+ MDYVN A +RL K DV+YRFV+DVA +
Sbjct:  174 SPLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANT 358          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.241e-29
Identity = 76/184 (41.30%), Postives = 96/184 (52.17%), Query Frame = 3
Query:    6 SPLSHFGLKQSXXXXXXXXXXXXXXXXXXXAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            SP+  +GL                       KA G  VTVISSS  KR EA+E LGAD +L S D   M  AA ++D IIDTV A HPL P              G    P+Q     ++ G K + GS  GS+ E + ML+F  E G+ + +EV+ M  VN A  RLE+NDVRYRFV+DVAG+
Sbjct:  168 SPMVEYGLNAPGKHLGVVGLGGLGHLGVKFGKAFGMKVTVISSSPAKREEALERLGADAFLSSRDGEGMAAAAATMDGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAAPLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAADVEVVAMGDVNAALGRLERNDVRYRFVIDVAGT 351          
BLAST of CK938791 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.836e-28
Identity = 70/153 (45.75%), Postives = 95/153 (62.09%), Query Frame = 3
Query:   99 KAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXXTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGS 557
            KA G  VTVIS+S  K  EA+E LGAD +L+S++A +M+ AA ++D IIDTV A H L P              G    P+Q     +    K++ GS IG M++T+EM++F  E GV + +EVI M+ VN A ERL+K DVRYRFV+DVA +
Sbjct:  205 KAFGVKVTVISTSPWKEAEAVERLGADAFLLSTNAEQMKAAAGTMDGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANT 357          
The following BLAST results are available for this feature:
BLAST of CK938791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MTDH_MEDSA1.229e-3241.30Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH6_ARATH7.963e-3240.22Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH7_ARATH1.358e-3140.76Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH1_STYHU2.317e-3140.76Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH8_ARATH2.317e-3141.30Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH6_ORYSJ7.454e-3044.87Probable cinnamyl alcohol dehydrogenase 6 OS=Oryza... [more]
CAD8D_ORYSJ2.832e-2941.30Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]
MTDH3_STYHU8.241e-2938.92Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
CAD8A_ORYSJ8.241e-2941.30Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CADH9_ORYSJ1.836e-2845.75Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004438_D03 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938791 ID=CK938791; Name=CK938791; organism=Citrus sinensis; type=EST; length=782bp
GGGTCAGTCCCCTGAGCCACTTTGGATTGAAGCAGAGCGGGCTGAGAGGA
GGAATCTTGGGGCTCGGAGGAGTAGGTCACATGGGGGTTTTGATAGCTAA
GGCGATGGGACACCATGTTACTGTGATTAGCTCTTCTGATAAGAAAAGAG
TGGAAGCTATGGAGCATCTTGGTGCCGATCAGTACCTTGTCAGCTCCGAC
GCAACTCGTATGCAAGAAGCCGCTGACTCACTTGATTATATCATTGATAC
CGTGCCCGCAAATCACCCTCTGGAGCCTTACCTTTCGCTGCTGAAGCTTG
ATGGAAAGTTGATCTTGACGGGTGTCATTAACACTCCCATGCAGTTTCTT
ACCCCTATGGTTATGCTTGGGAGAAAGGCAATCACGGGGAGCTTCATTGG
GAGCATGAAGGAGACAAAGGAAATGCTTGAATTCTGCCGAGAGAAGGGAG
TCACCTCCATGATTGAAGTGATCAAGATGGATTACGTTAACAAAGCATTC
GAGAGACTCGAAAAGAACGACGTTAGGTACAGATTCGTCGTGGACGTTGC
CGGAAGCAAACTCGATCCGTAGAGAAATTCAATTTTGGCATGATGCTCGT
TTTGTTTTTTGAGTGCCTTGTTTGGTTTTTATGCTTTCGTCGTTGGCCTA
ACCATATGTGGCTTCCGTGTTTACAATTTCTCCTAATAAGTTAAAAAAAA
AAAACAAGCTGAGGTGTTTACTGACAGTGTGTTAATTTAATCAGTATTTT
TTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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