EY665964
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665964 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.283e-13 Identity = 38/109 (34.86%), Postives = 61/109 (55.96%), Query Frame = 3 Query: 144 RISKRKTGSKSVSSGSPWYGPDRVKNLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGRNGVKFSEAVWVKERAQIFSE 470 R+SK T + S+ + D + L PP +L G PGD+G+D GL++DP + N++ E++HCRWAMLGA G PELL + G+ + + + + F++ Sbjct: 41 RVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTD 149
BLAST of EY665964 vs. ExPASy Swiss-Prot
Match: CB121_HORVU (Chlorophyll a-b binding protein 1B-21, chloroplastic OS=Hordeum vulgare GN=LHC Ib-21 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.552e-13 Identity = 49/132 (37.12%), Postives = 63/132 (47.73%), Query Frame = 3 Query: 108 LAPSSNELSNGGRISKRKTGSKSVSSGSPWYGPDRVKNLGPFSGEP-PSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGRNGVKFSEAVWVK-ERAQIFSEGGLDYLGNP 497 LAPSS +G T S V+ + W F G+P P++L G PGD+G+D GL+ P F + +E EI HCRWAML G + PE LG WVK + +G YLGNP Sbjct: 19 LAPSSRSGRSGLPFCAYATTSGRVTMSAEW-----------FPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEIYHCRWAMLCVPGVLVPEALGLGN-------WVKAQEWAALPDGQATYLGNP 132
BLAST of EY665964 vs. ExPASy Swiss-Prot
Match: LH18_EUGGR (Light-harvesting complex I LH38 proteins (Fragment) OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.128e-12 Identity = 37/68 (54.41%), Postives = 46/68 (67.65%), Query Frame = 3 Query: 243 PPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGRNGVKFSEAVWVK 446 PP YLTGE GD G+D AGL+ADP TF + + E+ HCR +ML +GC+ PELLG NG F +W K Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAWFQ--IWDK 444 HSP 2 Score: 67.781 bits (164), Expect = 8.940e-11 Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 3 Query: 234 SGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGR 410 + EPP+ LTGE+P D G+D L+ADP +A+ R E+ H R AML +GC+ PELLG+ Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251
BLAST of EY665964 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 6.191e-12 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 3 Query: 144 RISK--RKTGSKSVSSGSPWYGPDRVKNLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGRNGVKFSEAVWVKERAQIFSE 470 R+SK GS+SV+ + PDR L PP +L G PGD+G+D GL +DP + N + E++H RWAMLGA G PE L + GV + + + + F++ Sbjct: 41 RVSKFIAPVGSRSVAVSAVAADPDRP--LWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYFTD 149
BLAST of EY665964 vs. ExPASy Swiss-Prot
Match: CB11_SOLLC (Chlorophyll a-b binding protein 6A, chloroplastic OS=Solanum lycopersicum GN=CAB6A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.056e-11 Identity = 55/154 (35.71%), Postives = 76/154 (49.35%), Query Frame = 3 Query: 237 GEP-PSYLTGEFPGDYGWDTAGLSADP*TFAKNRELEIIHCRWAMLGALGCVFPELLGRNGVKFSEAVWVKERAQIFSEGG-LDYLGNPRLIHAQSILDIWACQVVLMRTVEG*RIAGWSLTQESE-PMYPWCGIYPLAPDFHQKGNARRDGLK 689 G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE LG WVK + GG YLG P + ++ I A + + + VE R S+ ++SE YP PL + K A+ + LK Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEALGLGN-------WVKAQEWAAIPGGQATYLGQP--VPWGTLPTILAIEFLAIAFVEHQR----SMEKDSEKKKYPGGAFDPLG---YSKDPAKFEELK 189 The following BLAST results are available for this feature:
BLAST of EY665964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665964 ID=EY665964; Name=EY665964; organism=Citrus sinensis; type=EST; length=855bpback to top |