EY649635

Overview
NameEY649635
Unique NameEY649635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649635 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.679e-13
Identity = 43/131 (32.82%), Postives = 74/131 (56.49%), Query Frame = 2
Query:   11 ECQRLGLTKFIGVSNFSSKKIEALLAFSTIP--PSVNQVEMNPAWQQRQLREFCKSKSIIVTAFSPLGAAGSSWGTNQ----VMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDI 385
            +C+  GL K IGVSNF+ +++E +L    +   P  NQVE +    Q +L +FCK+  II+ A+  LG    +   +Q    ++N   L  +A  + +T A + LR  +++G +V+  S  +ER+KEN+ +
Sbjct:  153 KCKDAGLAKSIGVSNFNRRQLEKILNKPGLKYKPVCNQVECHLYLNQMKLLDFCKTNGIILVAYGVLGTQRYNGWVDQNSPVLLNEPVLSSMAKKYNQTPALIALRHQLQRGIVVLNTSLKEERIKENMKL 283          
BLAST of EY649635 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.347e-12
Identity = 46/138 (33.33%), Postives = 68/138 (49.28%), Query Frame = 2
Query:   26 GLTKFIGVSNFSSKKIEALLAFSTIPPSVNQVEMNPAWQQ--RQLREFCKSKSIIVTAFSPLGAAGSSWGTNQVMNNEALKQIADAHGKTVAQVCLRWIIEQGAIVVAKSFNKERLKENLDIFDWALTDHDYDKINQI 433
            GL   +GVSNF    +E LL  STI P VNQ+E +P   +  + L EFC+SK IIV  + PL          Q    E  K +   +  +  Q+ L+W   +G I +  +   ER+KE L+   + L   D D++  +
Sbjct:  135 GLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIVEGYGPLSPLVRD---AQGPVAEFTKSLESKYHVSDTQILLKWAYSKGVIPITTTSKIERMKECLNFDSFTLDKADIDELGTL 269          
The following BLAST results are available for this feature:
BLAST of EY649635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 122
Match NameE-valueIdentityDescription
AK1CL_RAT8.679e-1332.82Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
I3ACR_SCHPO7.347e-1233.33NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-G09-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649635 ID=EY649635; Name=EY649635; organism=Citrus sinensis; type=EST; length=802bp
AGCCTGGTAAGAGTGCCAGAGGCTTGGCCTCACTAAGTTCATTGGTGTCA
GCAACTTCTCTTCCAAGAAGATTGAGGCTCTACTCGCCTTCTCTACCATC
CCTCCTTCAGTCAATCAAGTGGAGATGAACCCTGCCTGGCAACAGAGACA
GCTCAGAGAATTTTGCAAGTCCAAAAGTATTATTGTAACTGCATTCTCTC
CCTTGGGAGCAGCCGGGTCCAGTTGGGGCACGAATCAAGTTATGAACAAT
GAAGCACTGAAGCAGATTGCTGACGCTCACGGCAAGACTGTTGCTCAGGT
TTGTCTTCGATGGATAATTGAGCAAGGGGCGATTGTTGTTGCTAAGAGCT
TCAACAAGGAGAGACTGAAGGAGAACCTGGATATCTTTGACTGGGCACTA
ACTGATCACGATTATGACAAGATTAATCAAATCCCGCAGCACAGAATGAT
GCCCAGAGATGAGTATATTATCCCTCATGGGCCATTCAAGACACTTGAAG
AGCTGTGGGATGAGTAAATCCCCCTTTTAATATCTAATGTATATTCTACT
TCTTCTGCAATGGAAATTAGCTTTAAGTATGTTTCATATCTACCTAATTA
TTAGGTGTAGCTCACAGGATTTGAGCAGTTAATTGGCTTGTAACTATGAA
GAATTTTAAGTAAGTACTANAACCGAGGATTCTGTGATTGTTCTTTTCGG
CACACATATGAGATTGCATCAAATTCAGGATACTGTACATGGCACTTATA
TATAAATGTGCACAGTGAGGTACTGATTTGTGGCTAAAAAAAAAAAAAAA
AA
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