CK938765

Overview
NameCK938765
Unique NameCK938765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.464e-29
Identity = 78/153 (50.98%), Postives = 94/153 (61.44%), Query Frame = 2
Query:  356 DLSSEDESSKIVSTTSSANDLNDSNGKWM----------KTSGSK--NENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVN 778
            D +    S K+ +TT +A   + S  +            KT G K  N N SK  VE   +                DYIHVRARRGQATDSHSLAER RREKISERM+ LQ+LVPGC+KV GKAL+LDEIINY+Q+LQ QVE LSMKL +++
Sbjct:   58 DKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNTGKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPT---DYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSIS 207          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH064_ARATH (Transcription factor bHLH64 OS=Arabidopsis thaliana GN=BHLH64 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 1.217e-28
Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 2
Query:  551 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVNSRMNL 793
            DYIHVRARRGQATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+Q LQRQVE LSMKL  +N  + L
Sbjct:  181 DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNPELEL 261          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BEE2_ARATH (Transcription factor BEE 2 OS=Arabidopsis thaliana GN=BEE2 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.712e-28
Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 2
Query:  551 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVNSRM 787
            DYIHVRARRG+ATD HSLAERARREKIS++MK LQD+VPGCNKV GKA +LDEIINY+QSLQ+QVE LSMKL  +N  +
Sbjct:  137 DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPEL 215          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.385e-26
Identity = 68/154 (44.16%), Postives = 93/154 (60.39%), Query Frame = 2
Query:  356 DLSSEDESSKIVSTTSSANDLNDSNGKWM--------KTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVNSRMNL 793
            DL +   SS ++ +  +  D N +N  +         +  G+K E+GSK   + S                  D +HVRA+RGQATDSHSLAER RREKI+ER+K LQDLVPGC K +G A++LD II+Y++SLQ Q+E LSMKL A ++  +L
Sbjct:   30 DLPASTPSSFMLFSNGALVDANHNNSHFFPNLLHGNTRRKGNKEESGSKRRRKRSE---EEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDL 180          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.066e-24
Identity = 69/151 (45.70%), Postives = 87/151 (57.62%), Query Frame = 2
Query:  344 RKRRDL-----SSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVNS 781
            +KR+ L     +SE+  S    +TSSA    + N      S  + +     E E                    + +HVRARRGQATDSHS+AER RR KI+ER+K LQD+VPGC K +G A +LDEIINY+QSLQ QVE LSMKL A +S
Sbjct:   86 KKRKSLMEAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKER-----------------EVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASS 219          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH060_ARATH (Transcription factor bHLH60 OS=Arabidopsis thaliana GN=BHLH60 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.819e-24
Identity = 76/213 (35.68%), Postives = 100/213 (46.95%), Query Frame = 2
Query:  293 GSMGESTVTEQSGGGCGRKRRDLSSEDESSKIVSTTSSANDLNDSNGKWMKTSGSKNENGSKAEVEASSAAGNXXXXXXXXXXXXXDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNK-----------------------------------------------VIGKALVLDEIINYIQSLQRQVESLSMKLEAVNSRMN 790
            G    S+V   S     R + + +  D S +++S ++  N +   N          N NG + + E    +                Y+HVRARRGQATDSHSLAERARREKI+ RMK+LQ+LVPGC+K                                               + G ALVLDEIIN++QSLQRQVE LSM+L AVN R++
Sbjct:  123 GETPTSSVPSNSSANLDRVKTEPAETDSSQRLISDSAIENQIPCPN--------QNNRNGKRKDFEKKGKSSTKKNKSSEENEKLP-YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHLLMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRID 326          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.376e-24
Identity = 55/77 (71.43%), Postives = 65/77 (84.42%), Query Frame = 2
Query:  551 DYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSMKLEAVNS 781
            + +HVRARRGQATDSHSLAER RR KI+ER++ LQD+VPGC K +G A +LDEIINY+QSLQ QVE LSMKL A +S
Sbjct:  141 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQVEFLSMKLTAASS 217          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH082_ARATH (Transcription factor bHLH82 OS=Arabidopsis thaliana GN=BHLH82 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.182e-15
Identity = 45/66 (68.18%), Postives = 53/66 (80.30%), Query Frame = 2
Query:  563 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSM 760
            VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP  NK   KA +LDEII Y++ LQ QV+ LSM
Sbjct:   99 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKT-DKASMLDEIIEYVRFLQLQVKVLSM 163          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH069_ARATH (Transcription factor bHLH69 OS=Arabidopsis thaliana GN=BHLH69 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 2
Query:  563 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSM 760
            VRARRGQATD HS+AER RRE+I+ERMK LQ+LVP  NK   KA +LDEII+Y++ LQ QV+ LSM
Sbjct:  130 VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 194          
BLAST of CK938765 vs. ExPASy Swiss-Prot
Match: BH066_ARATH (Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.543e-15
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 2
Query:  563 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVESLSM 760
            +RARRGQATD HS+AER RRE+I+ERMK LQ+LVP  NK   KA +LDEII+Y++ LQ QV+ LSM
Sbjct:  138 IRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKT-DKASMLDEIIDYVKFLQLQVKVLSM 202          
The following BLAST results are available for this feature:
BLAST of CK938765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
BH137_ARATH5.464e-2950.98Transcription factor bHLH137 OS=Arabidopsis thalia... [more]
BH064_ARATH1.217e-2877.78Transcription factor bHLH64 OS=Arabidopsis thalian... [more]
BEE2_ARATH2.712e-2877.22Transcription factor BEE 2 OS=Arabidopsis thaliana... [more]
BH075_ARATH7.385e-2644.16Transcription factor bHLH75 OS=Arabidopsis thalian... [more]
BEE3_ARATH1.066e-2445.70Transcription factor BEE 3 OS=Arabidopsis thaliana... [more]
BH060_ARATH1.819e-2435.68Transcription factor bHLH60 OS=Arabidopsis thalian... [more]
BEE1_ARATH2.376e-2471.43Transcription factor BEE 1 OS=Arabidopsis thaliana... [more]
BH082_ARATH1.182e-1568.18Transcription factor bHLH82 OS=Arabidopsis thalian... [more]
BH069_ARATH1.543e-1568.18Transcription factor bHLH69 OS=Arabidopsis thalian... [more]
BH066_ARATH1.543e-1566.67Transcription factor bHLH66 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004438_E04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IIIF_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938765 ID=CK938765; Name=CK938765; organism=Citrus sinensis; type=EST; length=839bp
GGGGACTCACTCACTCGCTCACAAACTCTCCAAAATCCAAACTTTCTCTC
ATCTACCAGGGGCCTCGAGTGCCTGGATCCGAATCCCAATCCGCCTTTTT
AATGTACCCACCCGGGTCACTAAAATGGATCCTCCGCTTGTAAACGAGTC
TTCCTTCTCTGCTGCCAACCCTTCATCCTACAGTTTGGCAGAGATTTGGC
CTTTTCCAATCAACAATGGCGGTGCCGGTGATGCCGGTCTTCGAATGGGG
AATATGGGTCATGGGTTCGGGGAAAGTTCGGCTCTCAGAGATGGGTCGAT
GGGGGAATCAACAGTGACTGAGCAGAGTGGTGGTGGGTGTGGCAGAAAGA
GAAGGGATTTGAGCTCTGAAGATGAATCTTCTAAGATTGTTTCTACTACT
AGTAGTGCCAATGACTTGAATGATTCAAATGGTAAATGGATGAAAACATC
GGGATCAAAAAATGAAAATGGTTCAAAAGCTGAAGTGGAAGCAAGTTCTG
CAGCTGGTAACAAGCCAGCTGAAAGTAGTAAACCCTCTGAGCCACCTAAA
GACTATATTCATGTCAGAGCAAGAAGAGGCCAAGCTACTGATAGCCATAG
TTTAGCAGAGAGAGCTAGACGAGAAAAAATTAGCGAGAGGATGAAGATTC
TGCAGGATCTGGTCCCTGGATGCAATAAGGTTATTGGAAAAGCTCTTGTT
CTCGATGAAATAATTAATTACATTCAGTCACTACAACGGCAGGTTGAGTC
CCTGTCAATGAAGTTAGAAGCTGTTAATTCAAGGATGAACTTGACTCCTA
CCATTGAAGGGTTTCATCCAAAAGATCTTGGTGAACAGG
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