CK938762
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP10_HUMAN (Actin-related protein 10 OS=Homo sapiens GN=ACTR10 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 5.577e-14 Identity = 69/288 (23.96%), Postives = 130/288 (45.14%), Query Frame = 3 Query: 54 AGGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP----------DGQVI--TIGAERFRCPEVLFQ 845 +GGE +V D G K GFAG+ PR + PS++ R A + + ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T+ A+ + ++ D+K + +++ D ++ L+ ++ + E P DG+ I +G+ R E+LF+ Sbjct: 9 SGGEKTA-VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMPKPVRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVIIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTSVAKEQSLPSVMGSVPEGVLEDIKARTCFVS-DLKRGLKIQAAKFNIDGNNERPSPPPNVDYPLDGEKILHILGSIRDSVVEILFE 272
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP6_DEBHA (Actin-like protein ARP6 OS=Debaryomyces hansenii GN=ARP6 PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14 Identity = 76/294 (25.85%), Postives = 121/294 (41.16%), Query Frame = 3 Query: 72 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE---AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFY----NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN-------APAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETSK-------------TSSAVEKSYELP-----DGQVITIGAERFRCPEVLFQPSMI 857 Q V DNG+ +KAGF+ DAP +H + YVG+E + + K P +HG + +W+ + +W +TF N+ A H + LTE P QI+FE + APA V + S + +V+DSG + VPI + +L + G L L +I++ R Y E ++ +KEK ++A D+E+ L K T++ K+ + P D Q + + ERF PE + P +I Sbjct: 4 QYFVIDNGSYNIKAGFSNQDAP----------IKHQNALSKARDGLIYVGNEYLVQTNNYSGMIFKRPYDHGHLISWETEKAVWDYTFNKASPNQELDASITH-LTLTETPFQLPQLSMNTDQIVFEEYGFNEYYRCAPASLVPWSNLGSSESKNNDFTLVVDSGYSGTWIVPIIYQNVYWKGVKKLPIGGAALNGLLREIISFRHYDIAD--EPVLINTIKEKTCFMATDFEKSLANRKKYRCEFILPDFKTTTTGFVKTKDTPIDTTGDVQSLALIDERFTIPESFYHPEII 284
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.243e-13 Identity = 70/287 (24.39%), Postives = 128/287 (44.60%), Query Frame = 3 Query: 57 GGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP----------DGQVI--TIGAERFRCPEVLFQ 845 GGE +V D G K GFAG+ PR + PS++ R A + I ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T A+ + ++ D+K + +++ D ++ L+ ++ + E P DG+ I +G+ R E+LF+ Sbjct: 10 GGEKTA-VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQCTVDTGAAKGQSLPSVMGSVPEGVLEDIKVRTCFVS-DLKRGLQIQAAKFNIDGNNERPTPPPNVDYPLDGEKILHVLGSIRDSVVEILFE 272
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.768e-13 Identity = 70/288 (24.31%), Postives = 128/288 (44.44%), Query Frame = 3 Query: 54 AGGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAERE------------IVRDMKEKLAYIALDYEQELETSKTSSAVEKSYELP----------DGQVI--TIGAERFRCPEVLFQ 845 +GGE +V D G K GFAG+ PR + PS++ + A + I ++Y I + ++ +++ H ++ L V P + V++ E+ L P RE +T+++F+ F P++ +A +++L G + +VLD G S +PIYEG + + L L G+ L L L E+ T A+ + I+ D+K + +++ D ++ L ++ + E P DG+ I +G+ R E+LF+ Sbjct: 9 SGGEKTA-VVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVS-DLKRGLNIQAAKFNIDGNTERPSPPPNVDYPLDGEKILHVLGSIRDSVVEILFE 272
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP5_DROME (Actin-related protein 5 OS=Drosophila melanogaster GN=Arp5 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.722e-13 Identity = 52/240 (21.67%), Postives = 109/240 (45.42%), Query Frame = 3 Query: 78 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR-----HTGVMVGMGQK-------DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL 737 LV DNG+ + G++ P F +++ +PR G + + VG++ + + LK P E +++NW+ E+I+ + F + +HP++LTEA NP R++M +++FE + P++ I A+ S + +++ G +H +P+ +G + RL++ G + L +++ + + + + +IA+DY++EL Sbjct: 7 LVIDNGSYECRVGWSDSKEPDLRFRNVLTKPRKDRKKEAAASEGSASQTTVEQSAEIQVGNDITNIEAVRAHLKSPFERNVITNWNHQEQIFDYIFTKMGFDGQDKIDHPIILTEALANPNFCRQQMNELLFECYGIPSVSYGIDALYSWKHHQQKQKNISDALIISFGYSTTHVIPVLDGKLQLEHVRRLNVGGYHIITYLFRLMQMKYPVHLNAITISRMEKLVHEHCHIAVDYKEEL 246
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.794e-12 Identity = 44/179 (24.58%), Postives = 83/179 (46.37%), Query Frame = 3 Query: 78 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK---ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 602 +V NG+ AGF+ + P+ + PS + R G + + A+ + G G+ NWD +E W + + +L+V+PEE P+++T N K A E+ ++ F+ N P + I+ + + G+++ V+D G + PI +G + +A++R G Sbjct: 8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186
BLAST of CK938762 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.060e-12 Identity = 57/249 (22.89%), Postives = 114/249 (45.78%), Query Frame = 3 Query: 60 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQEL 737 G + LV DNG+ + G+ P F +++ +PR G + + + VG++ + + LK P E I++NW+ E+I+ + F ++ E+ +P++LTEA NP R+ M++++FE + PA+ I A+ S Y + R + +++ G +H +P+ G + RL++ G + L+ ++ + + + + +IA+DY +EL Sbjct: 2 GSPKRVLVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREEL 249 The following BLAST results are available for this feature:
BLAST of CK938762 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938762 ID=CK938762; Name=CK938762; organism=Citrus sinensis; type=EST; length=906bpback to top |