CN187858

Overview
NameCN187858
Unique NameCN187858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_MYCVP (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=mraW PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22
Identity = 72/185 (38.92%), Postives = 98/185 (52.97%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITS-------FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PV+L   +++ + + T TS        VD TLGA GHS   +   P L+L IG+D DP AL  A   L     G     ++T       R+        + N   +GVDAIL DLG+SSMQ++  ERGF+   D PLDMRMD  + L A  +LN++ +  + RVLR YGEE     +  +IVR R
Sbjct:    9 PVLLDRCVELLAPALTRTSTDGSGATLVDATLGAGGHSERFLTQFPALRL-IGLDRDPDALHIAGDRLARF--GDRVTLVRT-------RYDGIAAAVAESNCAATGVDAILFDLGVSSMQLDRVERGFAYSVDAPLDMRMDSGSDLTAAQVLNTYDEKALARVLRVYGEEKFAGRIAAQIVRRR 183          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_MYCS2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Mycobacterium smegmatis GN=mraW PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22
Identity = 70/190 (36.84%), Postives = 100/190 (52.63%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITS-------FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLR 782
            PV+L   +++ + + T T         VD TLGA GHS   +   P L+L IG+D DP+ALA A   L                F      +++    I   +  +GV   D +L DLG+SSMQ++  +RGFS   D PLDMRMDP A L A +I+N++    + R+LR+YGEE     + +KIVR R +
Sbjct:   11 PVLLDRCVELLAPALTRTDPDGTEAVLVDATLGAGGHSERFLTDFPALRL-IGLDRDPNALAIAGDRLAP--------------FGDRVTLVRTRYDGITSALAEAGVRRIDGVLFDLGVSSMQLDQKQRGFSYSADAPLDMRMDPDALLTAAEIVNTYDAKTLTRILRDYGEERFAGRIADKIVRRRAK 185          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_METS4 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Methylobacterium sp. (strain 4-46) GN=mraW PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22
Identity = 68/189 (35.98%), Postives = 104/189 (55.03%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L EV  V          VD T GA G+S A++ A P+L++ I +D DP+A+A A   L +   G+              R ++   G +D  + R GV+A+   ++D+G+SSMQ++  ERGFS   DGPLDMRM+  A   A D++N  P+AE+  ++  +GEE   R +   I+ AR R  + +T
Sbjct:    8 PVLLAEVRGVLRLGEGPGVVVDGTFGAGGYSRALLAADPDLRV-IAIDRDPTAVA-AGQELAAAAGGR-------------LRLVQGRFGDLDAIVRREGVEAVDGVVLDIGVSSMQLDRAERGFSFRADGPLDMRME-GAGTSAADLVNGAPEAELADIIYHFGEERRSRAVARAILEARRRAPIATT 180          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CHLPB (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Chlorobium phaeobacteroides (strain BS1) GN=mraW PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.780e-22
Identity = 73/189 (38.62%), Postives = 99/189 (52.38%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLH-----IGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRS-GVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGL 791
            PVM+ EV  V    R    +VD TLG  GHS AI+RA  +  L      IG+D D  A+A+A   L S          +T     NFR I  ++  + EN LR   V  IL+DLG+SS Q++  ERGFS L  GPLDMRM+P     A DI+N++ + E+  +   +GEE   R + + I   R   G+
Sbjct:    9 PVMVREV--VAWLVRRAGIYVDGTLGGGGHSLAILRALRDKGLEKGSFLIGIDQDSFAIAEAERTLASFRE-------RTRLVQGNFREIADIVSTLRENQLRGMEVAGILLDLGVSSFQIDTSERGFSYLRSGPLDMRMEPDEGQSAADIVNTFEERELADIFFRFGEEKKSRRIASAICSWRNERGV 188          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_SYMTH (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Symbiobacterium thermophilum GN=mraW PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21
Identity = 69/187 (36.90%), Postives = 103/187 (55.08%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIR-AHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E ++  +  R   +++DCT+G  GH++ I+R + P+ +L IG+D D +AL  A   L     G     ++T     NF H+  V  ++         D +LMD+G+SS Q +  ERGFS   D PLDMRMD    L A  ++N W + E+ RV+REYGEE     +   IVRAR +  + +T
Sbjct:    7 PVLLQETMEALAV-RPGGTYIDCTVGGGGHAAEILRRSSPDGRL-IGLDQDENALRAAGDRLAPF--GDRVTLVRT-----NFEHVADVADRLG----LGAADGVLMDIGVSSHQFDEGERGFSYHHDAPLDMRMDRTRPLTAAVLVNEWEEEEIARVIREYGEERWASRIAQFIVRARRQRPIETT 180          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_STRAW (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Streptomyces avermitilis GN=mraW PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21
Identity = 66/183 (36.07%), Postives = 98/183 (53.55%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITS--FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV---DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PVML   LD+ + + T      VDCTLG  GHS A++   PE +L + +D D  AL          L G+     +   F      + +V  ++ + + R GV     +L DLG+SSMQ++  +RGF+   D PLDMRMD    + A ++LN++P  E+ R+LR YGEE   + + + IVR R
Sbjct:    8 PVMLQRCLDMLAPALTEPGAVVVDCTLGLGGHSEALLTQFPEARL-VALDRDKEALR---------LSGE-----RLAPFGDRATLVHAVYDELPDVLDRLGVPRVQGVLFDLGVSSMQLDEADRGFAYAQDAPLDMRMDQTTGISAAEVLNTYPPGEIVRILRAYGEEKQAKRIVSAIVRER 175          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BACA2 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus amyloliquefaciens (strain FZB42) GN=mraW PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21
Identity = 71/185 (38.38%), Postives = 103/185 (55.68%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +     T +VDCTLG AGHS+ +++   E    I  D D +AL  A+  L+    GQ            NFR++K  L    E+ + S VD IL DLG+SS Q++ PERGFS   D PLDMRMD  A+L A++++N W   ++ R+  +YGEE   + +  KI  AR +  + +T
Sbjct:    7 VLLRETVDGLNIKPDGT-YVDCTLGGAGHSTYLLQQLSEKGRLIAFDQDDTALENAKKTLSEY-KGQLI------LVKSNFRYLKECL---HEHGITS-VDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQSAALTAKEVVNEWRYEDLVRIFFKYGEEKFSKQIARKIEEAREKSPIQTT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CORDI (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Corynebacterium diphtheriae GN=mraW PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.327e-21
Identity = 59/158 (37.34%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  303 VDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            +D TLGA GHS   + + PE ++ IG+D D ++LA AR  L          H +   FA     +      I    L  G+   L DLG+SSMQ++  ERGF+   D PLDMRMD    + A D+LN++   E+ R+L+ YG+E     + + IVR R
Sbjct:   45 IDGTLGAGGHSKYFLESFPEARV-IGLDRDTNSLASARERLKEFGDRFLGIHTRFDRFAPKLEELAQSGNPIAATALEQGISGALFDLGVSSMQLDQAERGFAYRVDAPLDMRMDNTIGITAADVLNTYSHGELARILKTYGDERFAGKIASAIVRER 201          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_THEFY (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Thermobifida fusca (strain YX) GN=mraW PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 69/191 (36.13%), Postives = 102/191 (53.40%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSS--RTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAI---LMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PVML  V+++ + +  +     VD TLG  GH+ A++RAHP L+L +GVD D +AL +AR  L                +A     + +V   I   +   G+D +   L DLG+SS Q++  ERGF+   D PLDMRMD      A DI+N++P +E+ R+ R YGEE     +   IVR R +  + +T
Sbjct:   22 PVMLERVVELLAPALQQPGAIAVDGTLGLGGHAEALLRAHPGLRL-VGVDRDTTALERARQRLAP--------------YADRIDLVHAVYSDIPRILDELGIDRVHGLLFDLGVSSPQLDEAERGFAYSYDAPLDMRMDRTQERTAADIVNTYPASELTRIFRVYGEERFAARIAQAIVRQRAKEPVRTT 197          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_PELPB (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 73/188 (38.83%), Postives = 97/188 (51.60%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPEL-----KLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQI-DENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGG 788
            PV++ EV+        I  +VD TLG  GHSSA++RA  +       L IG+D D +AL  A   L             T     NF  +  ++  I  E  L   V  IL+DLG+SS Q+N P+RGFS L +GPLDMRMD  AS  A DI+N + + E+ R+   YGEE   R +   IV  R + G
Sbjct:   11 PVLVNEVVAFLVRKPGI--YVDGTLGGGGHSSAMLRALFDAGFLAGSLLIGIDQDDAALRVAGETLKEFA-------ASTVLVKGNFCDMGGLIASICAEKGLEPKVMGILLDLGVSSFQINTPDRGFSYLREGPLDMRMDSNASRSAADIVNGYDEQELARLFYRYGEEPRSRSIARAIVAYRQKHG 189          
The following BLAST results are available for this feature:
BLAST of CN187858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRAW_MYCVP7.780e-2238.92S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_MYCS27.780e-2236.84S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_METS47.780e-2235.98S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CHLPB7.780e-2238.62S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_SYMTH1.016e-2136.90S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_STRAW1.016e-2136.07S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACA21.016e-2138.38S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CORDI1.327e-2137.34S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_THEFY1.733e-2136.13S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_PELPB1.733e-2138.83S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005B21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187858 ID=CN187858; Name=CN187858; organism=Citrus sinensis; type=EST; length=800bp
CTTAATAGCTGCTGTGTTTGGAGTGTCTCTTCCAATCCCATCCCTGGGCC
TGTGTTGCTGTTTTCACAACGTTTCCATTTCGCGCCGCACATGACAGTAA
GAATAAGAAGGTGGCGAAGGCGAAAGCAACGTCAGCAAGAGTGGGAGTGG
GAATGGGACTGGTGAAGGAAAAGAGGAGAACTCGTTCTAACAAAGATTAT
GACTATGAATCGATTATTCAGCAGCAGCAATCATCTCACATTCCAGTGAT
GTTGGGTGAAGTATTGGACGTGTTCTCATCGTCGAGGACAATTACCTCTT
TTGTCGATTGCACTTTGGGAGCTGCTGGTCATTCCTCTGCGATCATTCGG
GCCCACCCTGAATTGAAACTTCATATAGGTGTGGATGTTGATCCTTCGGC
ACTTGCAAAGGCTCGAGCTCATCTCAATTCTTTATTGCACGGCCAAGCTC
ATCCCCACCTGAAAACACATACTTTTGCGAAAAACTTCAGACATATCAAA
TCCGTGCTTGGTCAGATTGATGAGAATATATTACGCTCTGGAGTTGATGC
CATCTTAATGGACTTGGGAATGTCATCAATGCAGGTGAACAATCCTGAAA
GAGGCTTCAGTGTGCTTGGCGATGGACCACTTGATATGCGGATGGATCCT
CANGCAAGTCTGAAAGCAGAAGACATATTAAATTCATGGCCAGATGCTGA
AGTGGGGCGAGTCTTGCGGGAGTATGGAGAAGAAAGCAACTGGCGTTTGC
TTCAAAATAAAATAGTTCGGGCTCGCCTTCGTGGTGGATTGCATTCTACT
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