CN187858

Overview
NameCN187858
Unique NameCN187858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_GEOSM (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Geobacter sp. (strain M21) GN=mraW PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 71/178 (39.89%), Postives = 103/178 (57.87%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAH-PELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            V+  EVL   S  ++   +VD TLG AGH+  I+ A  PE +L IG D D  A+A AR  L S+  G      +     +NF  I   L +I  +    G+D  ++DLG+SS Q++  ERGFS + D PLDMRMD  +   A D++N+ P+AE+ R++ EYGEE   + + + IV+AR
Sbjct:    9 VLPDEVLQALSP-KSGGVYVDGTLGGAGHAGLILTASAPEGRL-IGFDRDEEAIAVARQRL-SVFGG------RVRIIHRNFAGIAQALAEIGVD----GIDGFVLDLGVSSHQLDRDERGFSFMHDAPLDMRMDRSSGQSAADLVNTLPEAELYRIISEYGEERWAKRVASFIVKAR 173          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CHLFF (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Chlamydophila felis (strain Fe/C-56) GN=mraW PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDG-PLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PV++ E L +F+  R    F D TLGA GH+ A + A+P +  + G D D  AL+ A+  L    +     H      A+N R          EN+     D IL DLG+SSMQ++   RGFS  GD   LDMRMD      A ++LN+  + ++GR+ REYGEE  W+     IV+ R
Sbjct:    9 PVLVNECLSLFAD-RNPKFFCDVTLGAGGHAEAFLSAYPSIVSYDGSDRDTMALSLAKERLEKFGNRVHLHHASFEDLAQNPR----------ENVY----DGILADLGVSSMQLDTLSRGFSFQGDDHDLDMRMDTSKGTTASEVLNTLREEDLGRIFREYGEEPQWKNAAKAIVQFR 172          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: ME5D1_PONAB (Putative S-adenosyl-L-methionine-dependent methyltransferase METT5D1 OS=Pongo abelii GN=METT5D1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.733e-21
Identity = 68/186 (36.56%), Postives = 103/186 (55.38%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXA---SLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PVM+ EVL   S  +    F+D T G+ GH+ AI++   ++ L+  +D DP+A A A  HL+ L             + K  R +     Q +  ++++GV     D +LMDLG SSMQ++ PERGFS+  DGPLDMRMD         A D++N++    +  +LR YGEE + + + + IV+AR
Sbjct:   74 PVMVDEVLHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIVLY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAETLLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNAFDQQALASILRTYGEEKHAKKIASAIVQAR 243          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOPS (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium perfringens (strain SM101 / Type A) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21
Identity = 66/168 (39.29%), Postives = 93/168 (55.36%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCTLG AGHSS I++        IG D D  AL  A         G+     K  T+   NF  I  VL  +  +    GVD ILMDLG+SS Q++N ERGFS + D PLDMRM+      A +I+N++ + E+ R+++EYGEE   + + + IV+ R    + +T
Sbjct:   25 YVDCTLGGAGHSSEIVKRLSSDGRLIGFDQDKDALKAA---------GERLKDYKNVTYVHSNFYAIYDVLTDLGID----GVDGILMDLGVSSYQLDNGERGFSYMQDAPLDMRMNRENEFSAYEIVNTYSEEELYRIIKEYGEEKFAKRIASFIVKNREEKNIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOP1 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21
Identity = 66/168 (39.29%), Postives = 93/168 (55.36%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFA-KNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCTLG AGHSS I++        IG D D  AL  A         G+     K  T+   NF  I  VL  +  +    GVD ILMDLG+SS Q++N ERGFS + D PLDMRM+      A +I+N++ + E+ R+++EYGEE   + + + IV+ R    + +T
Sbjct:   25 YVDCTLGGAGHSSEIVKRLSSDGRLIGFDQDKDALKAA---------GERLKDYKNVTYVHSNFYAIYDVLTDLGID----GVDGILMDLGVSSYQLDNGERGFSYMQDAPLDMRMNRENEFSAYEIVNTYSEEELYRIIKEYGEEKFAKRIASFIVKNREEKNIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOBJ (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium botulinum (strain Kyoto / Type A2) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.264e-21
Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +       +VDCTLG  GHS  I++        IG+D D SA+  A+  L        + H        NF +I S+L ++D +     VD I+MDLG+SS Q++   RGFS + D PLDMRM+   +L A +++NS+ + E+ ++L+ YGEE   R +   IV  R    + +T
Sbjct:    8 VLLEETIDSLNIKEDGV-YVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAKERLKDY-ENVIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEASRGFSYMKDAPLDMRMNREENLSAYNVVNSYEEEELFKILKNYGEEKFSRKIARFIVEKRTENPIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BIFLB (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bifidobacterium animalis subsp. lactis (strain Bl-04 / DGCC2908 / RB 4825 / SD5219) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21
Identity = 66/191 (34.55%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFV--DCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E +D+ + +   +  V  DCTLG AGH+ A ++A P   + IG+D D  AL KA A +                 +  F  + +   Q DE +   GV    A+ MDLG+SS+Q++  ERGFS   D PLDMRMD   +L A +IL ++    +  + +EYGEE   + +  +IV+ R    L ++
Sbjct:   10 PVLLQECVDLVTPALHASDSVAVDCTLGLAGHTIAFLKAAPNATV-IGIDRDEEALDKATARIAQ------------EGLSARFVPVHAAFDQFDEVLRAQGVSRVQAVFMDLGLSSLQIDERERGFSYAHDAPLDMRMDTSQALTAREILATYDADRLAHIFKEYGEERFSKPIAKRIVQQRQSSPLETS 187          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BIFAS (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bifidobacterium animalis subsp. lactis (strain DSM 10140 / JCM 10602 / LMG 18314) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21
Identity = 66/191 (34.55%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFV--DCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E +D+ + +   +  V  DCTLG AGH+ A ++A P   + IG+D D  AL KA A +                 +  F  + +   Q DE +   GV    A+ MDLG+SS+Q++  ERGFS   D PLDMRMD   +L A +IL ++    +  + +EYGEE   + +  +IV+ R    L ++
Sbjct:   10 PVLLQECVDLVTPALHASDSVAVDCTLGLAGHTIAFLKAAPNATV-IGIDRDEEALDKATARIAQ------------EGLSARFVPVHAAFDQFDEVLRAQGVSRVQAVFMDLGLSSLQIDERERGFSYAHDAPLDMRMDTSQALTAREILATYDADRLAHIFKEYGEERFSKPIAKRIVQQRQSSPLETS 187          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BIFA0 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.956e-21
Identity = 66/191 (34.55%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFV--DCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVD---AILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E +D+ + +   +  V  DCTLG AGH+ A ++A P   + IG+D D  AL KA A +                 +  F  + +   Q DE +   GV    A+ MDLG+SS+Q++  ERGFS   D PLDMRMD   +L A +IL ++    +  + +EYGEE   + +  +IV+ R    L ++
Sbjct:   10 PVLLQECVDLVTPALHASDSVAVDCTLGLAGHTIAFLKAAPNATV-IGIDRDEEALDKATARIAQ------------EGLSARFVPVHAAFDQFDEVLRAQGVSRVQAVFMDLGLSSLQIDERERGFSYAHDAPLDMRMDTSQALTAREILATYDADRLAHIFKEYGEERFSKPIAKRIVQQRQSSPLETS 187          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_NATTJ (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=mraW PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21
Identity = 63/186 (33.87%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PVM+ + +++     +    VD T+G AGHS  II + P   + +G+D DP A    +    SLL    +   K   F  NF +IK +  +I  +     VD IL+DLG+SS Q++N +RGF+   + PLDMRMD    + A +++N++ + ++  ++REYGEE   + +   IV+AR    +++T
Sbjct:    7 PVMIEKTIELLKPE-SAQVIVDGTMGGAGHSLRIINSLPPEGILVGIDQDPDAYEAGK----SLLEAYGN---KAKVFNDNFVNIKHICERIGIHY----VDGILLDLGVSSYQLDNKDRGFTYQENAPLDMRMDKSQKITASEVVNTYSEQKLAEIIREYGEEKWAQRIAQFIVQARQDQEINTT 180          
The following BLAST results are available for this feature:
BLAST of CN187858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRAW_GEOSM1.733e-2139.89S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CHLFF1.733e-2137.43S-adenosyl-L-methionine-dependent methyltransferas... [more]
ME5D1_PONAB1.733e-2136.56Putative S-adenosyl-L-methionine-dependent methylt... [more]
MRAW_CLOPS2.264e-2139.29S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CLOP12.264e-2139.29S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CLOBJ2.264e-2135.14S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BIFLB2.956e-2134.55S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BIFAS2.956e-2134.55S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BIFA02.956e-2134.55S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_NATTJ3.861e-2133.87S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005B21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187858 ID=CN187858; Name=CN187858; organism=Citrus sinensis; type=EST; length=800bp
CTTAATAGCTGCTGTGTTTGGAGTGTCTCTTCCAATCCCATCCCTGGGCC
TGTGTTGCTGTTTTCACAACGTTTCCATTTCGCGCCGCACATGACAGTAA
GAATAAGAAGGTGGCGAAGGCGAAAGCAACGTCAGCAAGAGTGGGAGTGG
GAATGGGACTGGTGAAGGAAAAGAGGAGAACTCGTTCTAACAAAGATTAT
GACTATGAATCGATTATTCAGCAGCAGCAATCATCTCACATTCCAGTGAT
GTTGGGTGAAGTATTGGACGTGTTCTCATCGTCGAGGACAATTACCTCTT
TTGTCGATTGCACTTTGGGAGCTGCTGGTCATTCCTCTGCGATCATTCGG
GCCCACCCTGAATTGAAACTTCATATAGGTGTGGATGTTGATCCTTCGGC
ACTTGCAAAGGCTCGAGCTCATCTCAATTCTTTATTGCACGGCCAAGCTC
ATCCCCACCTGAAAACACATACTTTTGCGAAAAACTTCAGACATATCAAA
TCCGTGCTTGGTCAGATTGATGAGAATATATTACGCTCTGGAGTTGATGC
CATCTTAATGGACTTGGGAATGTCATCAATGCAGGTGAACAATCCTGAAA
GAGGCTTCAGTGTGCTTGGCGATGGACCACTTGATATGCGGATGGATCCT
CANGCAAGTCTGAAAGCAGAAGACATATTAAATTCATGGCCAGATGCTGA
AGTGGGGCGAGTCTTGCGGGAGTATGGAGAAGAAAGCAACTGGCGTTTGC
TTCAAAATAAAATAGTTCGGGCTCGCCTTCGTGGTGGATTGCATTCTACT
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