CN187858

Overview
NameCN187858
Unique NameCN187858
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CHLMU (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Chlamydia muridarum GN=mraW PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 65/179 (36.31%), Postives = 95/179 (53.07%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLG-DGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PV++ E L +F      T+F D T+GA GH+ A + + P ++ + G D D SALA +      LL  +    L+  +F            +++        D +L DLG+SSMQ+ + ERGFS  G D PLDMRMD    + A ++LNS  + E+G + R+YGEE  WR   N +V  R
Sbjct:    9 PVLVKESLSLFQDQHP-TTFCDVTVGAGGHAEAFLTSFPSIEHYDGSDRDLSALALSE---KRLLPFKGRVCLRHASF-----------DEVNALTPDGMYDGVLADLGVSSMQLTDLERGFSFQGEDHPLDMRMDTSRGITASEVLNSLREEEIGEIFRKYGEEPLWRSAANAVVHFR 172          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CARHZ (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 68/186 (36.56%), Postives = 104/186 (55.91%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E ++  +  +    +VD TLG  GHS  I++   + ++ +G+D D  AL  A   L     G     +K+     NFR+I+ V+ ++  +     VD +LMDLG+SS Q++NP +GFS   DGPLDMRMDP     A D++N++P+ E+ R+  EYGEE     +   IV+ R +    ST
Sbjct:    7 PVLLNETIEHLNL-KAGGVYVDATLGGGGHSEEILK-RADCRV-VGLDQDEDALNHAAKRLAPF--GDRFIPVKS-----NFRNIRKVVYRLGLD----AVDGVLMDLGVSSFQLDNPLKGFSFQHDGPLDMRMDPQNPKTAADVVNTYPEKELIRIFYEYGEERYAPQIARAIVKRREKKPFTST 178          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BACC4 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus cereus (strain B4264) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 69/185 (37.30%), Postives = 99/185 (53.51%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +     T +VDCTLG  GHSS ++    E    I  D D  A+  A+   +S  +G+    +K+     NFR++   L +I      + VD IL DLG+SS Q++ PERGFS   D PLDMRMD  A L A D++NSW   ++ R+  +YGEE   + +  KI   R    + +T
Sbjct:    7 VLLKETVDGLNIKPDGT-YVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAKEKFSS--YGEQFITVKS-----NFRYLAEKLQEIGI----TEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYRENKAIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_ALHEH (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 70/187 (37.43%), Postives = 100/187 (53.48%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAII-RAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            PV+L E LD  +  R    +VD T G  GH++ I+ R  PE +L + VD DP A+A ARA      HG        H           + G+++   L   VD +L+DLG+SS Q+++ ERGFS + +GPLDMRMD    + A + L    +  + R LR+YGEE + R +   ++RAR  G L  T
Sbjct:   13 PVLLDEALDALAI-RPHGVYVDGTFGRGGHAAGILARLGPEGRLWL-VDRDPEAIAVARAR-----HGDDPRCTIAHG------RFDELPGRLEAAGLLHRVDGLLLDLGVSSPQLDSAERGFSFMREGPLDMRMDTSRGVTAREWLEQVDEKTLSRALRDYGEERHSRRIARALIRAREDGALPET 186          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: ME5D1_HUMAN (Putative S-adenosyl-L-methionine-dependent methyltransferase METT5D1 OS=Homo sapiens GN=METT5D1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.602e-21
Identity = 67/186 (36.02%), Postives = 102/186 (54.84%), Query Frame = 3
Query:  243 PVMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGV-----DAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXA---SLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRAR 776
            PVM+ EV+   S  +    F+D T G+ GH+ AI++   ++ L+  +D DP+A A A  HL+ L             + K  R +     Q +  ++++GV     D +LMDLG SSMQ++ PERGFS+  DGPLDMRMD         A D++N+     +  +LR YGEE + + + + IV+AR
Sbjct:   74 PVMVDEVVHCLSPQKG-QIFLDMTFGSGGHTKAILQKESDIVLY-ALDRDPTAYALAE-HLSEL-------------YPKQIRAMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMPTAADVVNALDQQALASILRTYGEEKHAKKIASAIVQAR 243          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_THETN (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Thermoanaerobacter tengcongensis GN=mraW PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20
Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAK-NFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VD TLG  GHS  I++     KL I +D D  A+  A+  L            K   + K NF++IK +L     N+    VD IL+DLG+SS Q+   ERGFS + D PLDMRMD  +   A D++N + + E+ RV+REYGEE     +   IV  R +G + +T
Sbjct:   25 YVDGTLGGGGHSEEILKRLTTGKL-IAIDRDEEAILAAKERLKDY---------KNVIYIKDNFKNIKEIL----RNLGIEKVDGILLDLGVSSYQLEEVERGFSYMKDAPLDMRMDKTSPFSAYDVVNRYSEKELERVIREYGEEKWASRIAKFIVEERKKGDIKTT 178          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOD6 (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium difficile (strain 630) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20
Identity = 57/167 (34.13%), Postives = 92/167 (55.09%), Query Frame = 3
Query:  300 FVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            +VDCT+G AGHS  I++   +  L IG D D +A++ A+  L+         H        NF +IK  L    E I    +D +L DLG+SS Q++  +RGFS + D PLDMRMD      A D++N++ + E+ +++++YGE++  + +   IV  R    + +T
Sbjct:   25 YVDCTMGGAGHSKEIVKKLSDKGLFIGFDQDKNAISTAKERLSEYESRVKFVH-------SNFENIKEEL----EKIGVYKIDGVLADLGVSSHQLDEADRGFSYMQDAPLDMRMDVRCEFSAYDVVNTYTEDELTKIIKDYGEDNWAKRIAKFIVEERANKPIETT 180          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOBL (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +       +VDCTLG  GHS  I++        IG+D D SA+  A+  L        + H        NF +I S+L ++D +     VD I+MDLG+SS Q++   RGFS + D PLDMRM+   +  A +++NS+ + E+ ++L+ YGEE   R +   IV  R    + +T
Sbjct:    8 VLLEETIDSLNIKEDGV-YVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAKEKLKDY-ENIIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEASRGFSYMKDAPLDMRMNREENFSAYNVVNSYEEEELFKILKNYGEEKFSRKIARFIVEKRTENPIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_CLOBK (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Clostridium botulinum (strain Okra / Type B1) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 3
Query:  246 VMLGEVLDVFSSSRTITSFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            V+L E +D  +       +VDCTLG  GHS  I++        IG+D D SA+  A+  L        + H        NF +I S+L ++D +     VD I+MDLG+SS Q++   RGFS + D PLDMRM+   +L A  ++N++ + E+ ++L+ YGEE   R +   IV  R    + +T
Sbjct:    8 VLLEETIDSLNIKEDGV-YVDCTLGGGGHSKEILKKLSHKGKLIGIDQDTSAIKAAKEKLKDY-ENIIYVH-------NNFYNIDSILEELDID----KVDGIIMDLGVSSYQLDEASRGFSYMKDAPLDMRMNREENLSAYGVINNYEEEELFKILKNYGEEKFSRKIARFIVEKRTENPIETT 179          
BLAST of CN187858 vs. ExPASy Swiss-Prot
Match: MRAW_BACCR (S-adenosyl-L-methionine-dependent methyltransferase mraW OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=mraW PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-20
Identity = 64/168 (38.10%), Postives = 92/168 (54.76%), Query Frame = 3
Query:  297 SFVDCTLGAAGHSSAIIRAHPELKLHIGVDVDPSALAKARAHLNSLLHGQAHPHLKTHTFAKNFRHIKSVLGQIDENILRSGVDAILMDLGMSSMQVNNPERGFSVLGDGPLDMRMDPXASLKAEDILNSWPDAEVGRVLREYGEESNWRLLQNKIVRARLRGGLHST 800
            ++VDCTLG  GHSS ++    E    I  D D  A+  A+   +S  +G+    +K+     NFR++   L +I      + VD IL DLG+SS Q++ PERGFS   D PLDMRMD  A L A D++NSW   ++ R+  +YGEE   + +  KI   R    + +T
Sbjct:   23 TYVDCTLGGGGHSSYLLSQLTEGGKLIAFDQDEIAIQNAKEKFSS--YGEQFITVKS-----NFRYLAEKLQEIGI----TEVDGILFDLGVSSPQLDTPERGFSYHHDAPLDMRMDQDAPLTAYDVVNSWSYEQLVRIFFQYGEEKFSKQIARKIEAYRENKAIETT 179          
The following BLAST results are available for this feature:
BLAST of CN187858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MRAW_CHLMU8.602e-2136.31S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CARHZ8.602e-2136.56S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACC48.602e-2137.30S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_ALHEH8.602e-2137.43S-adenosyl-L-methionine-dependent methyltransferas... [more]
ME5D1_HUMAN8.602e-2136.02Putative S-adenosyl-L-methionine-dependent methylt... [more]
MRAW_THETN1.123e-2038.69S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CLOD61.123e-2034.13S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CLOBL1.123e-2034.59S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_CLOBK1.123e-2034.59S-adenosyl-L-methionine-dependent methyltransferas... [more]
MRAW_BACCR1.123e-2038.10S-adenosyl-L-methionine-dependent methyltransferas... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005B21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187858 ID=CN187858; Name=CN187858; organism=Citrus sinensis; type=EST; length=800bp
CTTAATAGCTGCTGTGTTTGGAGTGTCTCTTCCAATCCCATCCCTGGGCC
TGTGTTGCTGTTTTCACAACGTTTCCATTTCGCGCCGCACATGACAGTAA
GAATAAGAAGGTGGCGAAGGCGAAAGCAACGTCAGCAAGAGTGGGAGTGG
GAATGGGACTGGTGAAGGAAAAGAGGAGAACTCGTTCTAACAAAGATTAT
GACTATGAATCGATTATTCAGCAGCAGCAATCATCTCACATTCCAGTGAT
GTTGGGTGAAGTATTGGACGTGTTCTCATCGTCGAGGACAATTACCTCTT
TTGTCGATTGCACTTTGGGAGCTGCTGGTCATTCCTCTGCGATCATTCGG
GCCCACCCTGAATTGAAACTTCATATAGGTGTGGATGTTGATCCTTCGGC
ACTTGCAAAGGCTCGAGCTCATCTCAATTCTTTATTGCACGGCCAAGCTC
ATCCCCACCTGAAAACACATACTTTTGCGAAAAACTTCAGACATATCAAA
TCCGTGCTTGGTCAGATTGATGAGAATATATTACGCTCTGGAGTTGATGC
CATCTTAATGGACTTGGGAATGTCATCAATGCAGGTGAACAATCCTGAAA
GAGGCTTCAGTGTGCTTGGCGATGGACCACTTGATATGCGGATGGATCCT
CANGCAAGTCTGAAAGCAGAAGACATATTAAATTCATGGCCAGATGCTGA
AGTGGGGCGAGTCTTGCGGGAGTATGGAGAAGAAAGCAACTGGCGTTTGC
TTCAAAATAAAATAGTTCGGGCTCGCCTTCGTGGTGGATTGCATTCTACT
back to top