CN187856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP9_RAT (Aquaporin-9 OS=Rattus norvegicus GN=Aqp9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 63/217 (29.03%), Postives = 91/217 (41.94%), Query Frame = -3 Query: 159 GIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYT-------------KGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAW---------DDHWIFWVGPFIGAALAAVYHQIVIR 740 GI I F + +Y T GISGGHINPAV+F + ++ + FY+ Q LGA GA V G GG VV T +++ T L+ VF+ D +R+ VP L P+ IG + ++ + +G +NPAR L +F W + WI VGP IGA L + + + I+ Sbjct: 56 GIITINIGFASAVVMALYVTFGISGGHINPAVSFAMCAFGRMEWFKFPFYVGAQFLGAFVGAATVFGIYYDGLMAFAGGKLLVVGENATAFIFATYPAPFISTPGAFVDQVVSTMFLLLIVFAMFD----SRNLGVPRGLEPVVIGLLIIVLSCSLGLNSGCAMNPARDLSPR-LFTALAGWGFEVFTVGNNFWWIPVVGPMIGAFLGGLIYILFIQ 267
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP9_MOUSE (Aquaporin-9 OS=Mus musculus GN=Aqp9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.449e-11 Identity = 62/217 (28.57%), Postives = 92/217 (42.40%), Query Frame = -3 Query: 159 GIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG--------FEGSKNYERLGGGANVVAHGYTK-----GDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPI-LAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAW---------DDHWIFWVGPFIGAALAAVYHQIVIR 740 GI I F + +Y T G+SGGHINPAV+F + ++ + FY+ Q LGA GA V G F K G + Y K +++ T L+ VF+ D +R+ VP L P+ IG + ++ + +G +NPAR L +F W + WI VGP IGA L + + + I+ Sbjct: 56 GIITINIGFATAVVMALYATFGVSGGHINPAVSFAMCTFGRMEWFKFPFYVGAQLLGAFVGAATVFGIYYDGLMAFADGKLLITGENGTAFIFATYPKPFVSVPGAFVDQVVSTMFLLLIVFAIFD----SRNLGVPRGLEPIVIGLLIIVISCSLGLNSGCAMNPARDLSPR-LFTALAGWGFEVFTFGNNFWWIPVVGPMIGAVLGGLIYVLFIQ 267
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: GLPF_THEMA (Probable glycerol uptake facilitator protein OS=Thermotoga maritima GN=glpF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 62/194 (31.96%), Postives = 79/194 (40.72%), Query Frame = -3 Query: 183 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV--KGFEGSKNYERLGGGANVVAHGYTK---GDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIF-------NKDHAWDDHWIFWVGPFIGAALAA 728 I +G + VY ISG HINPAVT GL + ++ Y+ Q LGA GA +V K + V G G L EIIGT VL+ V K L PL +GF V+ + L+ TG INPAR G + +D W W+ +GP IG L A Sbjct: 40 ITTGWGLAVAMSVYLVGRISGAHINPAVTIGLAFIGQFPWSKVPGYIFSQILGAFVGAILVYLTYLPHWKETDDPDAKLAVFCTGPAVRKYGANLLTEIIGTMVLLMGVLGIGANKL------ADGLNPLLVGFLVWSIGLSLGGPTGYAINPARDFGPRLAHAILPIPGKRDSDWSYSWVPIIGPIIGGILGA 227
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: GLPF_SHIFL (Glycerol uptake facilitator protein OS=Shigella flexneri GN=glpF PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 58/225 (25.78%), Postives = 93/225 (41.33%), Query Frame = -3 Query: 150 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG------FEGSKNYERLGGGANVVAHGYTKG----------DGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHW--IFWVG-------------PFIGAALAA-VYHQIVIRAIP 728 + W G + +Y TAG+SG H+NPAVT L L + + ++V Q GA C A +V G F+ + + + G V T E++ T +L+ + + TD LAPL IG + ++ + P+TG +NPAR G + AW W + + G P +GA + A Y +++ R +P Sbjct: 46 VIWGLG--VAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVPRGP---LAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVF-----AWLAGWGNVAFTGGRDIPYFLVPLFSPIVGAIVGAFAYRKLIGRHLP 260
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: NIP61_ARATH (Aquaporin NIP6-1 OS=Arabidopsis thaliana GN=NIP6-1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 58/191 (30.37%), Postives = 86/191 (45.03%), Query Frame = -3 Query: 165 GIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKG-FEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIV 731 G A + G + ++ T ISG H+NPAVT + Y+ Q + +V A +K FE + + GG V G ++ L E I +F L++ V + ATD + V LA + +G V L L P T +NP R+LG AI N A W++ P +GA + A + IV Sbjct: 114 GCAASAGLAVMIVILSTGHISGAHLNPAVTIAFAALKHFPWKHVPVYIGAQVMASVSAAFALKAVFEPT-----MSGGVTVPTVGLSQAFAL--EFIISFNLMFVVTAVATDTRA------VGELAGIAVGATVMLNILIAGPATSASMNPVRTLGPAIAANNYRA---IWVYLTAPILGALIGAGTYTIV 288 The following BLAST results are available for this feature:
BLAST of CN187856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187856 ID=CN187856; Name=CN187856; organism=Citrus sinensis; type=EST; length=775bpback to top |