CN187856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 4.498e-88 Identity = 156/204 (76.47%), Postives = 170/204 (83.33%), Query Frame = -3 Query: 141 CSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 752 C VGI GIAWAFGGMI+ LVYCTAGISGGHINPAVT GL LARK+SL R V Y+V QCLGA+CG G VK F+ S Y R GGGAN +A GY KG GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N + AWDD WIFWVGP IGAA AA YHQ ++RA K+ Sbjct: 75 CGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSY-YTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKA 277
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1) HSP 1 Score: 323.939 bits (829), Expect = 5.875e-88 Identity = 156/205 (76.10%), Postives = 177/205 (86.34%), Query Frame = -3 Query: 141 KCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 755 +C+ VG+ GIAWAFGGMI+ LVYCTAGISGGHINPAVTFGLLLARK++L RAV YMV QCLGA+CG +VK F+ S + R GGGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAAII+NKD AWD HWIFWVGPF GAA+AA YHQ V+RA K+ Sbjct: 73 QCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQ-SAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKA 276
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 7.673e-88 Identity = 151/206 (73.30%), Postives = 176/206 (85.44%), Query Frame = -3 Query: 156 VSKSNTKCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 773 V+ ++ C VG+ GIAWAFGGMI+ LVYCTAG+SGGHINPAVT GL LARK+SL RA+ YM QCLGA+CG +VKGF+ S Y+R GGGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLG A+++N + AW D WIFWVGPFIGAA+AA+YHQ+++RA Sbjct: 70 VNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSL-YDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGVAVVYNNNKAWSDQWIFWVGPFIGAAIAALYHQVILRA 274
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1) HSP 1 Score: 322.783 bits (826), Expect = 1.309e-87 Identity = 157/205 (76.59%), Postives = 174/205 (84.88%), Query Frame = -3 Query: 156 SKSNTKCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 770 S + CS VGI GIAWAFGGMI+ LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM Q LGA+CG +VKGF+ S Y R GGGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N AW D WIFWVGPFIGAA+AA+YHQIV+RA Sbjct: 73 SGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVVYNNSKAWSDQWIFWVGPFIGAAIAALYHQIVLRA 276
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2) HSP 1 Score: 321.242 bits (822), Expect = 3.808e-87 Identity = 153/209 (73.21%), Postives = 172/209 (82.30%), Query Frame = -3 Query: 141 KSNTKCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 767 K C VG+ GIAWAFGGMI+ LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QCLGA+CG G VK F + Y LGGGAN VA GY+KG LGAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+N + AWDD WIFWVGPF+GA AA YHQ ++RA K+ Sbjct: 63 KQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTP-YNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKA 270
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1) HSP 1 Score: 320.472 bits (820), Expect = 6.496e-87 Identity = 152/209 (72.73%), Postives = 171/209 (81.82%), Query Frame = -3 Query: 141 KSNTKCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 767 K C++VG+ GIAW+FGGMI+ LVYCTAGISGGHINPAVTFGL LARK+SL RA+ YM+ QC GA+CG G+VK F Y + GGGAN VA GY KG GAE+IGTFVLVYTVFSATD KR+ARDSHVPILAPLPIGFAVF+VHLATIPITGTGINPARS GAA+I+NK WDDHWIFWVGPF+GA AA YHQ V+RA K+ Sbjct: 65 KETDPCASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGP-YNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKKRVWDDHWIFWVGPFVGALAAAAYHQYVLRAAAIKA 272
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1) HSP 1 Score: 320.087 bits (819), Expect = 8.484e-87 Identity = 152/204 (74.51%), Postives = 174/204 (85.29%), Query Frame = -3 Query: 141 CSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 752 C++VG+ GI+WAFGGMI+ LVYCTAGISGGHINPAVTFGL LA K+SL RAV YMV QCLGA CG G+VK F+ S Y R GGGAN+++ GY G G+GAEIIGTFVLVYTVFSATD KRNARDSH+P+LAPLPIGF+VF+VHLATIPITGTGINPARS GAA+I+N AWDD WIFWVGPF+GAA+AA YHQ V+RA K+ Sbjct: 74 CASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQ-STYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKA 276
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2) HSP 1 Score: 319.316 bits (817), Expect = 1.447e-86 Identity = 154/211 (72.99%), Postives = 172/211 (81.52%), Query Frame = -3 Query: 141 VSKSNTKCSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKS 773 V S +C VG GIAWAFGGMI+ LVYCTAGISGGHINPAVTFGLLLARK+S+ RAV Y+V QCLG + G G+VKG Y GGGAN+VA GY+ G LGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS+GAA+I+N+ AWDDHWIFW GPFIGA AA YHQ ++RA K+ Sbjct: 63 VQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIM-KHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKA 272
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2) HSP 1 Score: 292.738 bits (748), Expect = 1.450e-78 Identity = 136/198 (68.69%), Postives = 160/198 (80.81%), Query Frame = -3 Query: 159 CSTVGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 752 C+ VG G+AW+FG I+ LVYCT G+SGGHINPAVT GL RKLSL R V Y+V QCLGA+ GAG+VKG + Y+ LGGGAN V+ GY+ LGAEI+GTF+LVYTVFSATD KR ARDS +P+L PLPIGFAVF+VHLATIPITGTGINPARSLGAA+++N+ AW DHWIFWVGP IGA LAA YH++V+R Sbjct: 77 CTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIM-KRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLR 273
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 1.076e-73 Identity = 132/204 (64.71%), Postives = 157/204 (76.96%), Query Frame = -3 Query: 135 GIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAII--FNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRAIPFKSRA 740 G+ GIAWAFGG+I+ LVYCTAGISGGH+NPAVTF ++LAR++SL RA Y + QC+GAVCGAG+ + G Y R GGGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +VHLATIPITGTGINPARSLG A++ AW WIFWVGPF GAA A +YH ++R K+ A Sbjct: 68 GVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKAFA 271 The following BLAST results are available for this feature:
BLAST of CN187856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187856 ID=CN187856; Name=CN187856; organism=Citrus sinensis; type=EST; length=775bpback to top |