CN187856

Overview
NameCN187856
Unique NameCN187856
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP_CICVR (Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30
Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = -3
Query:  156 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIRA 728
            IA  FG +I  +V C   +SG HINPAVT GLL+   +S+ +A+FY+++QC+GA+ G+ ++K    ++    L      +A G T   G   E   TFVL+  V S  D +R     ++   AP+ +G A+   HLA I  TG+ +NPARS G A+  N D  W +HW++W GP +G  +A + ++ + RA
Sbjct:   61 IALTFGFIIATMVQCIGHVSGCHINPAVTCGLLVTGHISILKAIFYIIVQCVGAIAGSAILKVITPAEFRGTL--CMTSLAPGVTPPMGFLVEACITFVLILLVQSVCDDRR----KNLGNAAPVAVGLAITCCHLAAIKYTGSSMNPARSFGPAV--NGDDNWANHWVYWAGPIVGGVVAGITYRALFRA 243          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.471e-30
Identity = 76/186 (40.86%), Postives = 107/186 (57.53%), Query Frame = -3
Query:  174 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAP-LPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYH 728
            I+ AFG  I  L      +SGGHINPA+T  LL+  ++SL RAVFY+  Q +GA+ GAG++           L    N + +  T G  +  E+I TF L   +FS+TD++R +     P+ +P L IG +V L HL  I  TG  +NPARS G A++ N+      HW+FWVGP +GA LAA+ +
Sbjct:   45 ISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNL--AVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNRFS--PSHWVFWVGPIVGAMLAAILY 221          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.277e-30
Identity = 70/191 (36.65%), Postives = 106/191 (55.50%), Query Frame = -3
Query:  159 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 728
            IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GA+ GA ++K    S   + +GG G   +    T G G+  E + TF+LV+ V    D +R    S +   APL IG ++   HL+ I  TG  +NPARS G A++      W D W++WVGP +G  LA   +++  +
Sbjct:   58 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS---DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCDNRR----SDIKGSAPLAIGLSITAGHLSAIKYTGASMNPARSFGPAVVMGN---WTDQWVYWVGPIVGGILAGAVYRLFFK 238          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 130.954 bits (328), Expect = 7.299e-30
Identity = 72/191 (37.70%), Postives = 108/191 (56.54%), Query Frame = -3
Query:  159 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 728
            IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GA+ GA V+K    S   E +GG G   +A G + G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARS G A++      + D W++WVGP +G  +A   +++  +
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS---EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSFGPAVVMGN---YTDLWVYWVGPIVGGIVAGAVYRLFFK 237          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.533e-30
Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = -3
Query:  159 IQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVIR 737
            I  IA+ FG  +  L      ISG HINPAVT G L+  ++S+ ++V Y+ +QC+GA+ GA V+K    S+    L  G +  +   T G  +  E + TF+LV  V   +D  R    + +   APL +G ++   HL  I +TG  +NPARS G A++ N    W DHW++WVGP +GA +AA+ ++ V +
Sbjct:   54 IPQIAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIK-VGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVVKGVSDPGR----TDIKGSAPLAVGLSIAAGHLCAIKLTGASMNPARSFGPAVVQN---MWIDHWVYWVGPIVGAIVAALLYKFVFK 238          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 72/198 (36.36%), Postives = 109/198 (55.05%), Query Frame = -3
Query:  171 VGIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVV-------KGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQ 743
            +G+ G+A+AFG  +  + +    ISG H+NPAV+FGL++  +      + Y++ Q +GA+  AGV+        GFE S       G A+    GYT G G  +E++ T + +  +  ATDA+  A        AP+ IG A+ L+HL +IP+T T +NPARS G A +F    A    W+FWV P IGAA+    ++
Sbjct:   35 IGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLAS-NGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPAG------FAPIAIGLALTLIHLISIPVTNTSVNPARSTGPA-LFVGGWALQQLWLFWVAPLIGAAIGGALYR 224          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.377e-28
Identity = 77/189 (40.74%), Postives = 104/189 (55.03%), Query Frame = -3
Query:  162 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 728
            IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP +GA +A++ +  V+
Sbjct:   44 IAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP2_HUMAN (Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.005e-28
Identity = 75/189 (39.68%), Postives = 103/189 (54.50%), Query Frame = -3
Query:  162 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 728
            IA AFG  I  LV     ISG HINPAVT   L+   +S+ RA FY+  Q LGAV GA ++     +     L    N +++  T G  +  E+  T  LV  +F++TD +R       P    L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP +GA L ++ +  V+
Sbjct:   44 IAMAFGLGIGTLVQALGHISGAHINPAVTVACLVGCHVSVLRAAFYVAAQLLGAVAGAALLHEITPADIRGDL--AVNALSNSTTAGQAVTVELFLTLQLVLCIFASTDERRGEN----PGTPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAILGSLLYNYVL 223          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.832e-28
Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = -3
Query:  162 GIQGIAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 740
            G+  +A A    ++A V     +SGGH+NPAVTF  L+  ++S+ RA++Y V Q +GA+    +++    +     +G     VA G ++  GL  EII TF LVY V+S A D KR +    + I+APL IG  V    L   P  G  +NPAR+ G A++      W +HWI+WVGPFIG ALAA+ ++ +I
Sbjct:   65 GLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLR--LATNGLRPVGFH---VASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPALV---GWRWSNHWIYWVGPFIGGALAALIYEYMI 246          
BLAST of CN187856 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.165e-27
Identity = 76/189 (40.21%), Postives = 103/189 (54.50%), Query Frame = -3
Query:  162 IAWAFGGMIYALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAVCGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDHAWDDHWIFWVGPFIGAALAAVYHQIVI 728
            IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGAV GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  AI+  K   +DDHW+FW+GP +GA +A++ +  V+
Sbjct:   44 IAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDERRGDNVG----TPALSIGFSVALGHLLGIHYTGCSMNPARSLAPAIVTGK---FDDHWVFWIGPLVGAIVASLLYNYVL 223          
The following BLAST results are available for this feature:
BLAST of CN187856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 195
Match NameE-valueIdentityDescription
AQP_CICVR1.471e-3037.70Aquaporin AQPcic OS=Cicadella viridis GN=AQP PE=1 ... [more]
AQP5_RAT1.471e-3040.86Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP_AEDAE3.277e-3036.65Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
AQP_ANOGA7.299e-3037.70Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQP_HAEIX9.533e-3037.31Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
AQPZ_PSEPK1.377e-2836.36Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
AQP2_SHEEP1.377e-2840.74Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]
AQP2_HUMAN4.005e-2839.68Aquaporin-2 OS=Homo sapiens GN=AQP2 PE=1 SV=1[more]
TIP32_ARATH6.832e-2839.18Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
AQP2_BOVIN1.165e-2740.21Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005B20_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005B20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187856 ID=CN187856; Name=CN187856; organism=Citrus sinensis; type=EST; length=775bp
TTTACGCAATGCTNATAATTTACACACAATTAATTAACATCTTAAACAGT
CTATCACCAAATGCACATAAACAAAAAGACACGACAAAGAAGATACAAAT
TAAAAAAAAAAAGGTCCATCAGTGAACTCTCTTAAGCCCTGGACTTGAAG
GGAATGGCCCTGATGACTATCTGGTGGTACACAGCAGCCAGTGCAGCTCC
AATGAATGGTCCAACCCAGAAGATCCAATGGTCATCCCAGGCATGGTCTT
TGTTGAAGATGATGGCAGCTCCAAGACTCCTAGCTGGGTTGATGCCAGTT
CCTGTGATGGGGATGGTGGCCAGGTGGACCAAGAAAACAGCAAATCCAAT
GGGGAGGGGGGCCAAAATAGGGACATGAGAGTCTCTGGCGTTTCTCTTCG
CATCAGTGGCAGAGAAGACAGTGTAAACAAGAACAAAGGTTCCAATAATC
TCAGCACCAAGACCATCACCCTTGGTGTAGCCGTGAGCAACAACATTGGC
TCCACCACCCAACCTCTCGTAGTTCTTTGAACCTTCGAATCCCTTGACAA
CACCAGCACCACAGACAGCACCAAGGCACTGCATGACCATGTAGAAGACA
GCCCTTGTCAGGGAAAGCTTCCTCGCTAGCAGCAGACCGAAGGTCACTGC
TGGGTTGATGTGTCCTCCTGAGATACCAGCAGTGCAGTAAACAAGCGCAT
AGATCATGCCACCAAAGGCCCAAGCAATTCCTTGGATACCGACAGTGGAG
CACTTGGTGTTAGACTTAGAGACAC
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