CK938705

Overview
NameCK938705
Unique NameCK938705
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.412e-11
Identity = 56/180 (31.11%), Postives = 86/180 (47.78%), Query Frame = 1
Query:  160 LHALRSRFKDPTNVLQS---RDPTLVNPCTWFHVTC--DSNNHVIRLDLGNSNISXXXXXXXXXXXXXXXXXXYMNDISGKIPKELGN-LKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFE-NNKLNGPEL 678
            L  L++   DP++ L S    + +  + C    V+C  +  N +I L L +  ++                    ND+SG IP ++ + L  LV++D+  NKL G IP      K L  L L++NKL+GSIP +L+ L  L+   ++ N L GTIP +     F  + F  NN L G  L
Sbjct:   31 LQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCWNEKENRIISLQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPYLVTLDLSGNKLGGSIPTQIVECKFLNALILSDNKLSGSIPSQLSRLDRLRRLSLAGNDLSGTIPSE--LARFGGDDFSGNNGLCGKPL 208          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: PGIP1_ARATH (Polygalacturonase inhibitor 1 OS=Arabidopsis thaliana GN=PGIP1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.412e-11
Identity = 57/198 (28.79%), Postives = 93/198 (46.97%), Query Frame = 1
Query:  133 LSTNSEGNALHALRSRFKDPTNVLQSRDPTLVNPCTWFHVTCDS---NNHVIRLDLGNSNISXXXXXXXXXXXXXXXXXXY-MNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPME----SFENNKLNGPELQGLVPYDF 702
            L   ++ N L  ++    +P + L S DP   + C+W+ + C     N+ V  L + +  IS                    +++++G I   +  LK+L  + +    L G IP   + LK+L+FL L+ N L+GSIP  L+TL  +   ++S N L G+IP    F SFP         +N+L+GP  + L   DF
Sbjct:   24 LCNQNDKNTLLKIKKSLNNPYH-LASWDPQ-TDCCSWYCLECGDATVNHRVTALTIFSGQISGQIPAEVGDLPYLETLVFRKLSNLTGTIQPTIAKLKNLRMLRLSWTNLTGPIPDFISQLKNLEFLELSFNDLSGSIPSSLSTLPKILALELSRNKLTGSIPES--FGSFPGTVPDLRLSHNQLSGPIPKSLGNIDF 217          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.844e-11
Identity = 58/181 (32.04%), Postives = 82/181 (45.30%), Query Frame = 1
Query:  142 NSEGNALHALRSRFKDPT---NVLQSRDPTLVNPCTWFHVTCDSNNHVIRLDLGNSNISXXXXXXXXXXXXXXXXXXY-MNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP-VDGPFRSFPMESFENNKLNG 669
            N++  AL +LRS     T   N+ Q+      +PC W  V C+SN  V  L L    +S                    +N +SG +PK+L    +L  + +  N+  GEIP+   +L  L  L L +N  TG I    T L+ LK   + NN L G+IP +D P   F   +  NN LNG
Sbjct:   34 NADRTALLSLRSAVGGRTFRWNIKQT------SPCNWAGVKCESNR-VTALRLPGVALSGDIPEGIFGNLTQLRTLSLRLNALSGSLPKDLSTSSNLRHLYLQGNRFSGEIPEVLFSLSHLVRLNLASNSFTGEISSGFTNLTKLKTLFLENNQLSGSIPDLDLPLVQF---NVSNNSLNG 204          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 48/150 (32.00%), Postives = 66/150 (44.00%), Query Frame = 1
Query:  235 CTWFHVTCDSNN---HVIRLDLGNSNISXXXXXXXXXXXXXXXXXXYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESF--ENNKLNG 669
            C W  V C+SN    H +RL  G   +                     N +SG+IP +  NL  L S+ +  N+  GE P SF  L +L  L +++N  TGSIP  +  L+ L    + NNG  G +    P  S  +  F   NN LNG
Sbjct:   54 CNWVGVECNSNQSSIHSLRLP-GTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNL----PSISLGLVDFNVSNNNLNG 198          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.146e-11
Identity = 40/98 (40.82%), Postives = 52/98 (53.06%), Query Frame = 1
Query:  370 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKL 663
            N I G +P EL  L  L  MD+  N + G IP++  N+ SL  L L+ NKLTG IP  ++ L  L  F+VS N L G +P     + F   SF  N L
Sbjct:  280 NRIRGTLPSELSKLTKLRKMDISGNSVSGHIPETLGNISSLIHLDLSQNKLTGEIPISISDLESLNFFNVSYNNLSGPVPT-LLSQKFNSSSFVGNSL 376          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11
Identity = 54/197 (27.41%), Postives = 83/197 (42.13%), Query Frame = 1
Query:  142 NSEGNALHALR-SRFKDPTNVLQSRDPTLVNPCTWFHVTCDSNN--------HVIRLDLGNSNISXXXXXXXXXXXXXXXXXXYMNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVPYDFG 705
            N++G  L   + S   DP +VL++ +     PC W  VTC             V  L L N ++                     N  +G +P  + N   L S+ +  N L G++PKS  ++ +L+ L L+ N  TG IP  ++ L +L V  +S N   G IP    F +  +    +N LNG      +P D G
Sbjct:   28 NTDGVLLLTFKYSILTDPLSVLRNWNYDDATPCLWTGVTCTELGKPNTPDMFRVTSLVLPNKHLLGSITPDLFSIPYLRILDLSSNFFNGSLPDSVFNATELQSISLGSNNLSGDLPKSVNSVTNLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIP--SGFEAAQILDLSSNLLNGS-----LPKDLG 217          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query:  370 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 609
            N ++G IPKE GN+ +L S+ +  N+L GE+P    NL +++ + L++N   G IP     L+ L+ F VS+N L GTIP
Sbjct:  120 NRLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIP 199          

HSP 2 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 36/102 (35.29%), Postives = 60/102 (58.82%), Query Frame = 1
Query:  370 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPE 675
            N +SG++P ELGNL ++  M +  N   GEIP +FA L +L+  R+++N+L+G+IP  +   + L+   +  +GL G IP+        ++    + LNGPE
Sbjct:  144 NQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPI-AIASLVELKDLRISDLNGPE 244          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 1
Query:  367 MNDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 609
            +N +SG+IPKE GN  SL  +D+  N   G IP+   NL  LK L L++NKLTG++P  L  L ++  F +++  L GTIP
Sbjct:  155 VNRLSGEIPKEFGN-SSLTYLDLESNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIP 234          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: DR100_ARATH (DNA-damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana GN=DRT100 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.366e-11
Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  376 ISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVDGPFRSFPMESFENNKLNGPELQGLVP 693
            I+G+IP  + +L SL  +D+  NK+ GEIP     L  L  L L  N+++G IP  LT+L +LK  +++ NG+ G IP D  F S  M S     L   EL G +P
Sbjct:  123 ITGEIPPCITSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELTENGITGVIPAD--FGSLKMLS--RVLLGRNELTGSIP 224          

HSP 2 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query:  370 NDISGKIPKELGNLKSLVSMDMYQNKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIP 609
            N+++G IP+ +  ++ L  +D+ +N +EG IP+   N+K L  L L+ N LTG IP  L + S L V ++S N L GTIP
Sbjct:  217 NELTGSIPESISGMERLADLDLSKNHIEGPIPEWMGNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIP 296          
BLAST of CK938705 vs. ExPASy Swiss-Prot
Match: PGIP2_ARATH (Polygalacturonase inhibitor 2 OS=Arabidopsis thaliana GN=PGIP2 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 44/113 (38.94%), Postives = 60/113 (53.10%), Query Frame = 1
Query:  373 DISGKIPKELGNLKSLVSMDMYQ-NKLEGEIPKSFANLKSLKFLRLNNNKLTGSIPRELTTLSDLKVFDVSNNGLCGTIPVD-GPFRSFPMESFENNKLNGPELQGLVPYDFG 705
            +ISG+IP E+G+L  L S+   +   L G I  + A LK+L FLRL+   LTG +P  L+ L +L+  D+S N L G+IP      R         NKL GP     +P  FG
Sbjct:   81 EISGQIPPEVGDLPYLTSLIFRKLTNLTGHIQPTIAKLKNLTFLRLSWTNLTGPVPEFLSQLKNLEYIDLSFNDLSGSIPSSLSSLRKLEYLELSRNKLTGP-----IPESFG 188          
The following BLAST results are available for this feature:
BLAST of CK938705 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
Y1719_ARATH1.412e-1131.11Probable inactive receptor kinase At1g27190 OS=Ara... [more]
PGIP1_ARATH1.412e-1128.79Polygalacturonase inhibitor 1 OS=Arabidopsis thali... [more]
Y1848_ARATH1.844e-1132.04Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y2267_ARATH3.146e-1132.00Probable inactive receptor kinase At2g26730 OS=Ara... [more]
IMK3_ARATH3.146e-1140.82Probable leucine-rich repeat receptor-like protein... [more]
RPKL_ARATH4.109e-1127.41Receptor protein kinase-like protein At4g34220 OS=... [more]
Y1534_ARATH5.366e-1141.25Probable LRR receptor-like serine/threonine-protei... [more]
RKF1_ARATH5.366e-1144.44Probable LRR receptor-like serine/threonine-protei... [more]
DR100_ARATH5.366e-1139.62DNA-damage-repair/toleration protein DRT100 OS=Ara... [more]
PGIP2_ARATH7.008e-1138.94Polygalacturonase inhibitor 2 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_C07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938705 ID=CK938705; Name=CK938705; organism=Citrus sinensis; type=EST; length=866bp
GGGGGGCCTTGATTTTATATTCATAAACACCTTTGATATTTTTTCCTTCT
TATTTCCCACTTCACGCTTGCAATTTCTCTCATGGCTCCAATTTCTCTCA
TTCTCTCCTTCTTCCTCTTCATTTCACCTGCCCTCTCAACAAACTCTGAA
GGAAATGCTTTGCATGCCTTGAGAAGCAGGTTTAAGGACCCCACAAATGT
GTTGCAGAGCCGGGACCCAACGCTGGTTAATCCCTGCACTTGGTTCCATG
TCACCTGTGATTCCAACAATCATGTGATTCGCTTGGACTTGGGTAACTCT
AATATTTCTGGAACTTTGGGGCCTGGGCTTGGCCAGCTCCAGCATCTGCA
GTACTTGGAGCTTTACATGAATGACATAAGTGGGAAAATTCCGAAAGAGT
TAGGTAATTTGAAAAGCCTTGTCAGCATGGATATGTATCAGAATAAACTG
GAAGGAGAAATACCAAAGTCCTTCGCCAATTTGAAGTCACTTAAATTTCT
GCGGTTGAACAACAACAAACTAACAGGATCAATTCCGAGGGAACTAACCA
CCCTGTCGGACCTCAAAGTTTTTGATGTTTCTAACAATGGTCTCTGTGGG
ACAATCCCTGTTGATGGTCCTTTTAGAAGCTTTCCTATGGAGAGTTTTGA
AAATAATAAACTCAATGGACCAGAGCTGCAAGGACTGGTGCCTTATGATT
TTGGATGCTGAAGAAGGTTGAAAACCCTCCGTCTTCCATTGAAGACCATA
ATGTTAAAGACTCATATAGGGTAAAATTATATTGTCTGCATTAGCTTGAA
CGAATGGCTATATATATTATGTCAGCGGCAGTGACTGTTCATGTATGAAG
TAACTAAAGCAATTAA
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