CK938702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_PONAB (60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_HUMAN (60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_LAPHA (60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/90 (62.22%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_BOVIN (60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 3.333e-24 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR + R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVGKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_RAT (60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 9.699e-24 Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK PR + R+G+ +K FVR +IREV FAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_DANRE (60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23 Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKGH VTK P+ + R+G+ +K F R +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGHKVTKNVSKPKHSRRRGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNTLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_CHICK (60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23 Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 VGLNKG+ VTK PR R+G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN L R Sbjct: 9 VGLNKGYKVTKNVSKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMR 98
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_ICTPU (60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.211e-23 Identity = 56/94 (59.57%), Postives = 69/94 (73.40%), Query Frame = 3 Query: 87 VGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSN---ALRKSRA 359 VGL KGH VTK P+ + R G+ +K FVR +IREV GFAPYE+R ELLKV KDKRALK K+++GTH RAK+KREE+SN A+RK+ A Sbjct: 9 VGLKKGHPVTKNVTKPKHSRRGGRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNILAAMRKAAA 102
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_TRIHM (60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.829e-22 Identity = 55/102 (53.92%), Postives = 72/102 (70.59%), Query Frame = 3 Query: 54 MAPKQP-NTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 MA + P TGL VGLNKGH T + + PR + KG SKR FVR V++EVAG APYE+R+ ELL+ KDKRA K+AK++LGT RAK+K +E+ + +SR Sbjct: 1 MAKEAPAKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLRNSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102
BLAST of CK938702 vs. ExPASy Swiss-Prot
Match: RL36_CAEEL (60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36 PE=1 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22 Identity = 49/93 (52.69%), Postives = 65/93 (69.89%), Query Frame = 3 Query: 78 GLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNALRKSR 356 GL VGLNKGH T+ + R KG SK+ VR ++RE+ GFAPYE+R+ E+L++ KDKRALK KR++GTH+RAK KREE+ N + R Sbjct: 8 GLAVGLNKGHAATQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQR 100 The following BLAST results are available for this feature:
BLAST of CK938702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938702 ID=CK938702; Name=CK938702; organism=Citrus sinensis; type=EST; length=645bpback to top |