CK938701
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_CAEEL (40S ribosomal protein S16 OS=Caenorhabditis elegans GN=rps-16 PE=1 SV=3) HSP 1 Score: 206.453 bits (524), Expect = 1.208e-52 Identity = 97/140 (69.29%), Postives = 120/140 (85.71%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V+SVQ FGRKKTA AV +CK+G+GLIK+NG P+E +EP+ILR K EP+LL+G+ RF VD+RIRV GGGH +QIYA+RQ++AKALVA+Y KYVDEQSK+E+K+I YD++LLVADPRR E KKFGG GARAR+QKSYR Sbjct: 5 VQSVQTFGRKKTATAVAHCKKGQGLIKVNGRPLEFLEPQILRIKLQEPLLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAAYDKSLLVADPRRRESKKFGGPGARARYQKSYR 144
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_CANGA (40S ribosomal protein S16 OS=Candida glabrata GN=RPS16 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.692e-52 Identity = 98/140 (70.00%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V SVQ FG+KK+A AV + K G+GLIK+NG PI LVEPEILRFK YEP+LL+G +FA +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGG+GARARFQKSYR Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADARRPEPKKFGGKGARARFQKSYR 143
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_CANAL (40S ribosomal protein S16 OS=Candida albicans GN=RPS16 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.692e-52 Identity = 98/139 (70.50%), Postives = 116/139 (83.45%), Query Frame = 3 Query: 102 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 +SVQ FG+KKTA AV + K G+GLIKING PI LV+PEILRFK YEP+ L+G +F G+D+R++V GGGH SQ+YAIRQ+IAK LVA++QKYVDE SK E+K I YD+TLLVAD RR EPKKFGGRGARARFQKSYR Sbjct: 4 QSVQTFGKKKTATAVAHVKAGKGLIKINGSPITLVQPEILRFKVYEPLTLVGLDKFQGIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEASKNELKKIFASYDKTLLVADSRRMEPKKFGGRGARARFQKSYR 142
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_ASHGO (40S ribosomal protein S16 OS=Ashbya gossypii GN=RPS16 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 2.692e-52 Identity = 98/140 (70.00%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V SVQ FG+KK+A AV + K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +FA +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGGRGARARFQKSYR Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGRGARARFQKSYR 143
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_YEAST (40S ribosomal protein S16 OS=Saccharomyces cerevisiae GN=RPS16A PE=1 SV=2) HSP 1 Score: 204.527 bits (519), Expect = 4.592e-52 Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V SVQ FG+KK+A AV + K G+GLIK+NG PI LVEPEILRFK YEP+LL+G +F+ +D+R+RV GGGH SQ+YAIRQ+IAK LVA++QKYVDEQSK E+K YDRTLL+AD RR EPKKFGG+GAR+RFQKSYR Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVEPEILRFKVYEPLLLVGLDKFSNIDIRVRVTGGGHVSQVYAIRQAIAKGLVAYHQKYVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGKGARSRFQKSYR 143
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_NEUCR (40S ribosomal protein S16 OS=Neurospora crassa GN=rps-16 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.336e-51 Identity = 94/139 (67.63%), Postives = 117/139 (84.17%), Query Frame = 3 Query: 102 ESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 ++VQ FG+KK A AV C +G+GLIK+NG P++L PEILR K YEPILLLG +FA VD+R++V GGGH SQ+YA+RQ+IAKA+VA+Y KYVDE SK +K L+++DRTLLVADPRRCEPKKFGG+GAR+RFQKSYR Sbjct: 4 QAVQVFGKKKNATAVARCVQGKGLIKVNGVPLKLYAPEILRAKLYEPILLLGTDKFAEVDIRLKVSGGGHVSQVYAVRQAIAKAIVAYYAKYVDEHSKNTLKTALIQFDRTLLVADPRRCEPKKFGGKGARSRFQKSYR 142
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_KLULA (40S ribosomal protein S16 OS=Kluyveromyces lactis GN=RPS16 PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.336e-51 Identity = 96/140 (68.57%), Postives = 117/140 (83.57%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V SVQ FG+KK+A AV + K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +FA +D+R++V GGGH SQ+YAIRQ+IAK LVA++QK+VDEQSK E+K YDRTLL+AD RR EPKKFGGRGAR+RFQKSYR Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGSPITLVQPEILRFKVYEPLLLVGLDKFANIDIRVKVTGGGHVSQVYAIRQAIAKGLVAYHQKFVDEQSKNELKKAFTSYDRTLLIADSRRPEPKKFGGRGARSRFQKSYR 143
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_DEBHA (40S ribosomal protein S16 OS=Debaryomyces hansenii GN=RPS16 PE=3 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 6.631e-51 Identity = 94/138 (68.12%), Postives = 114/138 (82.61%), Query Frame = 3 Query: 105 SVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 SVQ FG+KKTA AV + K G+GLIK+NG PI LV+PEILRFK YEP+ L+G +F +D+R++V GGGH SQ+YAIRQ+IAK LVA++QK+VDE SK E+K + YD+TLLVAD RR EPKKFGGRGARARFQKSYR Sbjct: 5 SVQTFGKKKTATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLTLVGLDKFQNIDIRVKVSGGGHVSQVYAIRQAIAKGLVAYHQKFVDEASKNELKKVFASYDKTLLVADSRRMEPKKFGGRGARARFQKSYR 142
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_SACEX (40S ribosomal protein S16 OS=Saccharomyces exiguus GN=RPS16 PE=3 SV=3) HSP 1 Score: 197.208 bits (500), Expect = 7.332e-50 Identity = 92/140 (65.71%), Postives = 115/140 (82.14%), Query Frame = 3 Query: 99 VESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 V SVQ FG+KK+A AV + K G+GLIK+NG PI LV+PEILRFK YEP+LL+G +F +D+R+RV GGGH SQ+YAIRQ+IAK L+A++QK+VDEQSK E+K YDRTLL+AD R EPKKFGG+GAR+R+QKSYR Sbjct: 4 VPSVQTFGKKKSATAVAHVKAGKGLIKVNGAPITLVQPEILRFKVYEPLLLVGLDKFTNIDIRVRVTGGGHVSQVYAIRQAIAKGLIAYHQKFVDEQSKNELKRAFTLYDRTLLIADSRMPEPKKFGGKGARSRYQKSYR 143
BLAST of CK938701 vs. ExPASy Swiss-Prot
Match: RS16_DICDI (40S ribosomal protein S16 OS=Dictyostelium discoideum GN=rps16 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.633e-49 Identity = 90/137 (65.69%), Postives = 117/137 (85.40%), Query Frame = 3 Query: 108 VQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 518 VQ G+K+TAVAV Y G+GLIK+NG P+E ++P+ L+ K YEP+L++G+ F+ VD+R+RV+GGG +QIYAIRQ+IAK++VA++QKYVDE+SK EIK ++ YDR+LLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 11 VQTHGKKRTAVAVAYATNGKGLIKVNGVPLEFIQPKNLKLKVYEPVLIVGKDVFSQVDIRVRVRGGGSVAQIYAIRQAIAKSIVAYHQKYVDEESKNEIKKKILDYDRSLLVADPRRCEPKKFGGRGARARFQKSYR 147 The following BLAST results are available for this feature:
BLAST of CK938701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938701 ID=CK938701; Name=CK938701; organism=Citrus sinensis; type=EST; length=719bpback to top |