CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_DICDI (Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.004e-53
Identity = 105/197 (53.30%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  294 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSV-ACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            + + ++ DAQYYG I IGTP Q F V+FDTGSSNLW+PS  C  +V AC  H             NG   +IQYG+GA++GF S DSV VG L VKDQ F EAT EPG+ F  AKFDGILGL FQ ISV +  PV+YNM+ QGL+   +FSFWL+R    + GGE+ FG +D   Y G  TYVP+T + YW+F M D
Sbjct:   53 IPISDFEDAQYYGAITIGTPGQAFKVVFDTGSSNLWIPSKKCPITVVACDLHNKYNSGASSTYVANGTDFTIQYGSGAMSGFVSQDSVTVGSLTVKDQLFAEATAEPGIAFDFAKFDGILGLAFQSISVNSIPPVFYNMLSQGLVSSTLFSFWLSRTPGAN-GGELSFGSIDNTKYTGDITYVPLTNETYWEFVMDD 248          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_ASPFU (Vacuolar protease A OS=Aspergillus fumigatus GN=pep2 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 2.004e-53
Identity = 113/282 (40.07%), Postives = 160/282 (56.74%), Query Frame = 3
Query:   24 ESTLIFQVSAIMGTKIRAVPXXXXXXXXXXXXXXXXXNDGLVR-IGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            +ST +   S ++G+   AV                   D  VR +G K M + PN          H E L          N+L D    D++ + N+++AQY+ EI +GTPPQKF V+ DTGSSNLWVP ++C  S+AC+ H             NG   +I+YG+G ++GF S D++++GDL V  Q+F EAT EPG+ F   +FDGILGLG+  ISV   VP +YNM+ QGL+ +PVF+F+L    +E +  E  FGGVD NHY G+ T +P+ +K YW+
Sbjct:    2 KSTSLLTASVLLGSASAAVHKLKLNKVPLDEQLYTHNIDAHVRALGQKYMGIRPN---------VHQELLEE--------NSLNDMSRHDVL-VDNFLNAQYFSEISLGTPPQKFKVVLDTGSSNLWVPGSDCS-SIACFLHNKYDSSASSTYKANGTEFAIKYGSGELSGFVSQDTLQIGDLKVVKQDFAEATNEPGLAFAFGRFDGILGLGYDTISVNKIVPPFYNMLDQGLLDEPVFAFYLGDTNKEGDNSEASFGGVDKNHYTGELTKIPLRRKAYWE 264          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.419e-53
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKV---------GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NYMDAQYYGEIGIGTPPQ FTV+FDTGSSNLWVPS +C    +AC+ H             NG S  I YG+G+++G+ S D+V V           + V+ Q F EAT++PG+TF+ AKFDGILG+ +  ISV N +PV+ N+++Q L++  +FSF+LNR+     GGE++ GG D  +YKG  +Y+ VT+K YWQ +M
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNAQPGGELMLGGTDSKYYKGPLSYLNVTRKAYWQVHM 272          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_MOUSE (Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 4.465e-53
Identity = 102/226 (45.13%), Postives = 147/226 (65.04%), Query Frame = 3
Query:  228 LRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSV---------KVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+  + KY   ++ + +E    + LKNY+DAQYYG+IGIGTPPQ FTV+FDTGSSNLWVPS +C    +AC+ H             NG S  I YG+G+++G+ S D+V         K   + V+ Q F EAT++PG+ F+ AKFDGILG+G+  ISV N +PV+ N+++Q L+   +FSF+LNR+ +   GGE++ GG D  +Y G+ +Y+ VT+K YWQ +M
Sbjct:   48 LKGPITKYSMQSSPKTTEPVSEL-LKNYLDAQYYGDIGIGTPPQCFTVVFDTGSSNLWVPSIHCKILDIACWVHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSDQSKARGIKVEKQIFGEATKQPGIVFVAAKFDGILGMGYPHISVNNVLPVFDNLMQQKLVDKNIFSFYLNRDPEGQPGGELMLGGTDSKYYHGELSYLNVTRKAYWQVHM 272          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.617e-53
Identity = 100/204 (49.02%), Postives = 136/204 (66.67%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKV-----------GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            LKNYMDAQYYGEIGIGTPPQ FTV+FDTGSSNLWVPS +C    +AC+ H             NG S  I YG+G+++G+ S D+V V           G + V+ Q F EAT++PG+TF+ AKFDGILG+ +  ISV N +PV+ N+++Q L+   +FSF+L+R+     GGE++ GG D  +YKG  +Y+ VT+K YWQ ++
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQVHL 274          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.617e-53
Identity = 109/197 (55.33%), Postives = 128/197 (64.97%), Query Frame = 3
Query:  291 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            +VAL N  D  YYGEIGIGTPPQKFTVIFDTGSS LWVPS+                            A   Y +   + + S DSV +GDLVVK+Q+FIEAT E    F+   FDGILGL FQ ISV    PVWYNM+ QGL++   FSFWLNRN  E+EGGE+VFGG+DPNH++G HTYVPVT + YWQF +GD
Sbjct:    7 VVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSK---------------------------AHSMYESSGSSTYKSQDSVTIGDLVVKEQDFIEATEEADNVFLNRLFDGILGLSFQTISV----PVWYNMLNQGLVKR--FSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGD 170          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.894e-52
Identity = 102/203 (50.25%), Postives = 136/203 (67.00%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFS-YDSVKV---------GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            LKNYMDAQYYGEIGIGTPPQ FTV+FDTGSSNLWVPS +C    +AC+ H             NG + +I YG+G+++G+ S  D+V V         G + V+ Q F EAT++PG+TF+ AKFDGILG+ +  ISV N VPV+ N+++Q L+   +FSF+LNR+     GGE++ GG+D  +YKG   Y  VT+K YWQ +M
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVFDNLMQQKLVDKDIFSFYLNRDPGAQPGGELMLGGIDSKYYKGSLDYHNVTRKAYWQIHM 209          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.780e-52
Identity = 107/259 (41.31%), Postives = 155/259 (59.85%), Query Frame = 3
Query:  141 GLVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVA--------------LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            GL+R+ LK+ K                 ++R ++K+ G  +++   +  D+V               L NYMD +Y+GEI +GTPPQ FTVIFDTGSSNLWVPS  C  S AC  H             NG + S+QYGTG+++G    D+V V  ++V++Q+F E+  EPG TF+ A+FDGILGLG+  I+VG+  PV+ NM+ Q L++ P+FS +++RN     GGE+VFGG D + + G+  +VPVT +GYWQ  +
Sbjct:   16 GLIRVPLKRQK-----------------SIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYC-ISQACAQHDRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDAVTVEGILVQNQQFGESVSEPGSTFVDAEFDGILGLGYPSIAVGDCTPVFDNMIAQNLVELPMFSVYMSRNPNSAVGGELVFGGFDASRFSGQLNWVPVTNQGYWQIQL 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.421e-52
Identity = 109/259 (42.08%), Postives = 152/259 (58.69%), Query Frame = 3
Query:  141 GLVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVA--------------LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            GL+R+ LK+ K                 ++R + K+ G  +++   +  D+V               L NYMD QY+GEI IGTPPQ FTVIFDTGSSNLWVPS  C  S AC  H             NG + S+QYGTG+++G    DSV V  ++V++Q+F E+  EPG TF+ A FDGILGLG+  I+VG   PV+ NM+ Q L++ P+FS +++R+     GGE+VFGG D + + G+  +VPVT +GYWQ  +
Sbjct:   16 GLIRVPLKRQK-----------------SIRKTPKEKGKLSHVWTQQGIDMVQYTDSCNNDQAPSEPLINYMDVQYFGEISIGTPPQNFTVIFDTGSSNLWVPSVYC-ISPACAQHNRFQPQLSSTYESNGNNFSLQYGTGSLSGVIGIDSVTVEGILVQNQQFGESVSEPGSTFVDASFDGILGLGYPSIAVGGCTPVFDNMIAQNLVELPMFSVYMSRDPNSPVGGELVFGGFDASRFSGQLNWVPVTNQGYWQIQL 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: NAPSA_MOUSE (Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.200e-51
Identity = 98/195 (50.26%), Postives = 128/195 (65.64%), Query Frame = 3
Query:  294 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            V L  +M+ QY+G IG+GTPPQ FTV+FDTGSSNLWVPST C +FS+AC+FH             NG   +IQYGTG ++G  S D++ +G +      F EA  EP + F +A FDGILGLGF  ++VG   P    MV+QGL++ PVFSF+LNR+ +  +GGE+V GG DP HY    T++PVT   YWQ +M
Sbjct:   63 VPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASSSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPTLAVGGVQPPLDAMVEQGLLEKPVFSFYLNRDSEGSDGGELVLGGSDPAHYVPPLTFIPVTIPAYWQVHM 257          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
CATD_DICDI2.004e-5353.30Cathepsin D OS=Dictyostelium discoideum GN=ctsD PE... [more]
CARP_ASPFU2.004e-5340.07Vacuolar protease A OS=Aspergillus fumigatus GN=pe... [more]
CATD_CANFA3.419e-5349.50Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_MOUSE4.465e-5345.13Cathepsin D OS=Mus musculus GN=Ctsd PE=1 SV=1[more]
CATD_HUMAN7.617e-5349.02Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CARDF_CYNCA7.617e-5355.33Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CATD_PIG2.894e-5250.25Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CATEA_XENLA3.780e-5241.31Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
CATEB_XENLA8.421e-5242.08Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
NAPSA_MOUSE3.200e-5150.26Napsin-A OS=Mus musculus GN=Napsa PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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