CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: NAPSA_HUMAN (Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.588e-50
Identity = 112/245 (45.71%), Postives = 141/245 (57.55%), Query Frame = 3
Query:  144 LVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+RI L +++  P  R+   L    G    A + K G P+     +    V L NY D QY+GEIG+GTPPQ FTV FDTGSSNLWVPS  C +FSV C+ H             NG   +IQYGTG + G  S D + +G +      F EA  EP + F  A FDGILGLGF  +SV    P    +V+QGL+  PVFSF+LNR+ +E +GGE+V GG DP HY    T+VPVT   YWQ +M
Sbjct:   26 LIRIPLHRVQ--PGRRILNLLR---GWREPAELPKLGAPS---PGDKPIFVPLSNYRDVQYFGEIGLGTPPQNFTVAFDTGSSNLWVPSRRCHFFSVPCWLHHRFDPKASSSFQANGTKFAIQYGTGRVDGILSEDKLTIGGIKGASVIFGEALWEPSLVFAFAHFDGILGLGFPILSVEGVRPPMDVLVEQGLLDKPVFSFYLNRDPEEPDGGELVLGGSDPAHYIPPLTFVPVTVPAYWQIHM 262          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 2.074e-50
Identity = 97/202 (48.02%), Postives = 133/202 (65.84%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKV---------GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            LKNYMDAQYYGEIGIGTPPQ FTV+FDTGS+NLWVPS +C    +AC+ H             NG +  I YG+G+++G+ S D+V V         G + V+ Q F EA ++PGV F+ AKFDGILG+ +  ISV N +PV+ N+++Q L+   VFSF+LNR+ +   GGE++ GG D  +Y+G   +  VT++ YWQ +M
Sbjct:   51 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWTHRKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDKNVFSFFLNRDPKAQPGGELMLGGTDSKYYRGSLMFHNVTRQAYWQIHM 252          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_NANOT (Vacuolar protease A OS=Nannizzia otae (strain CBS 113480) GN=PEP2 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.074e-50
Identity = 90/198 (45.45%), Postives = 130/198 (65.66%), Query Frame = 3
Query:  273 DSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            ++E    V + N+++AQY+ EI IGTPPQ F V+ DTGSSNLWVP  +C  S+AC+ H             NG S +I+YG+G++ GF S D+V++GD+ +K+Q F EAT EPG+ F   +FDGILG+G+  ISV    P +Y MV+QGL+ +PVFSF+L    ++ +   + FGG D +HY G  T +P+ +K YW+
Sbjct:   70 EAESGHNVLIDNFLNAQYFSEISIGTPPQTFKVVLDTGSSNLWVPGKDCS-SIACFLHSTYDSSASSTFTRNGTSFAIRYGSGSLEGFVSQDNVQIGDMKIKNQLFAEATSEPGLAFAFGRFDGILGMGYDTISVNKITPPFYKMVEQGLVDEPVFSFYLGDTNKDGDQSVVTFGGADKSHYTGDITTIPLRRKAYWE 266          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.538e-50
Identity = 97/202 (48.02%), Postives = 132/202 (65.35%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKV---------GDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L NYMDAQYYGEIGIGTPPQ FTV+FDTGS+NLWVPS +C    +AC+ H             NG +  I YG+G+++G+ S D+V V         G + V+ Q F EA ++PGV F+ AKFDGILG+ +  ISV N +PV+ N+++Q L+   VFSF+LNR+ +   G E++ GG D  +Y+G  TY  VT++ YWQ +M
Sbjct:   46 LTNYMDAQYYGEIGIGTPPQCFTVVFDTGSANLWVPSIHCKLLDIACWVHHKYNSDKSSTYVKNGTTFDIHYGSGSLSGYLSQDTVSVPCNPSSSSPGGVTVQRQTFGEAIKQPGVVFIAAKFDGILGMAYPRISVNNVLPVFDNLMRQKLVDKNVFSFFLNRDPKAQPGEELMLGGTDSKYYRGSLTYHNVTRQAYWQIHM 247          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_YEAST (Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 4.621e-50
Identity = 94/192 (48.96%), Postives = 127/192 (66.15%), Query Frame = 3
Query:  294 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE-GGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            V L NY++AQYY +I +GTPPQ F VI DTGSSNLWVPS  C  S+AC+ H             NG   +IQYGTG++ G+ S D++ +GDL +  Q+F EAT EPG+TF   KFDGILGLG+  ISV   VP +YN ++Q L+ +  F+F+L    ++ E GGE  FGG+D + +KG  T++PV +K YW+
Sbjct:   81 VPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSLEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWE 271          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.344e-49
Identity = 98/207 (47.34%), Postives = 136/207 (65.70%), Query Frame = 3
Query:  255 FPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            FP     S  T+  +L+NY+DA+Y+G I IGTPPQ+FTVIFDTGSSNLWVPST C  S+AC+ H               E+ SI YGTG++ G   YD+VKVG++   +Q F  +  EPG+TF+VA FDGILGL +  IS  +A PV+ NM  +GL+ + +FS +L+ N   ++G  ++FGG+D ++Y G   +VPV+ +GYWQ  M
Sbjct:   54 FPKETFASVSTE--SLENYLDAEYFGTISIGTPPQEFTVIFDTGSSNLWVPSTYCS-SLACFLHKRFNPDDSSTFQATSETLSITYGTGSMTGILGYDTVKVGNIEDTNQIFGLSKTEPGITFLVAPFDGILGLAYPSISASDATPVFDNMWNEGLVSEDLFSVYLSSN--GEKGSMVMFGGIDSSYYTGSLNWVPVSHEGYWQITM 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.344e-49
Identity = 93/191 (48.69%), Postives = 126/191 (65.97%), Query Frame = 3
Query:  294 VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            V + N+M+AQY+ EI IGTPPQ F V+ DTGSSNLWVPS+ C  S+ACY H             NG S  I+YG+G+++GF S D + +GD+ + DQ F EAT EPG+ F   +FDGILGLG+  I+V    P +Y MV+Q L+ +PVFSF+L     +D   E+VFGGV+ + Y GK T +P+ +K YW+
Sbjct:   75 VPITNFMNAQYFSEITIGTPPQTFKVVLDTGSSNLWVPSSQCG-SIACYLHNKYESSESSTYKKNGTSFKIEYGSGSLSGFVSQDRMTIGDITINDQLFAEATSEPGLAFAFGRFDGILGLGYDRIAVNGITPPFYKMVEQKLVDEPVFSFYL---ADQDGESEVVFGGVNKDRYTGKITTIPLRRKAYWE 261          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.293e-49
Identity = 98/234 (41.88%), Postives = 140/234 (59.83%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYGF------PNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE--GGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            R+  +   ++R S+K+ G       P  +     T  V L NYMD QYYGEIGIGTPPQ F V+FDTGSSN+WVPS+ C     AC +H             NG   +++Y TG ++GF S D + VG + V  Q F E T  P + FM+A+FDG++G+GF E ++G   P++ N++ QGL+++ VFSF+ NR+ +  +  GG+IV GG DP HY+G   Y+ + + G WQ  M
Sbjct:   33 RISLKRMPSIRESLKERGVDMARLGPERMALVNITSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDVITVGGITV-TQTFGEVTEMPALPFMLAEFDGVVGMGFSEQAIGKVTPLFDNIISQGLLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIRTGLWQIPM 265          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATE_RANCA (Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.109e-49
Identity = 102/250 (40.80%), Postives = 144/250 (57.60%), Query Frame = 3
Query:  141 GLVRIGLKKMK-----LDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            G++R+ LK+ K     L    +L+     +  E L+ S        +   S +T    L NY+D +Y+G+I IGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H             NGE+  IQYGTG + G    D V V  + V+ Q F E+  EPG TF  + FDGILGL +  ++V N +PV+ NM+ Q L++ P+F  ++NR+    +GGE+V GG D + + G+  +VP+T +GYWQ  +
Sbjct:   16 GIIRVPLKRQKSMRKILKEKGKLSHLWTKQGNEFLQLS--------DSCSSPETASEPLMNYLDVEYFGQISIGTPPQQFTVIFDTGSSNLWVPSIYCT-SQACTKHNRYRPSESTTYVSNGEAFFIQYGTGNLTGILGIDQVTVQGITVQSQTFAESVSEPGSTFQDSNFDGILGLAYPNLAVDNCIPVFDNMIAQNLVELPLFGVYMNRDPNSADGGELVLGGFDTSRFSGQLNWVPITVQGYWQIQV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: RENI_PANTR (Renin OS=Pan troglodytes GN=REN PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.941e-48
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:  285 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE--GGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            T  V L NYMD QYYGEIGIGTPPQ F V+FDTGSSN+WVPS+ C     AC +H             NG   +++Y TG ++GF S D + VG + V  Q F E T  P + FM+A+FDG++G+GF E ++G   P++ N++ QG++++ VFSF+ NR+ +  +  GG+IV GG DP HY+G   Y+ + + G WQ  M
Sbjct:   73 TSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQM 271          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
NAPSA_HUMAN1.588e-5045.71Napsin-A OS=Homo sapiens GN=NAPSA PE=1 SV=1[more]
CATD_BOVIN2.074e-5048.02Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
CARP_NANOT2.074e-5045.45Vacuolar protease A OS=Nannizzia otae (strain CBS ... [more]
CATD_SHEEP3.538e-5048.02Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CARP_YEAST4.621e-5048.96Saccharopepsin OS=Saccharomyces cerevisiae GN=PEP4... [more]
PEPA1_RABIT1.344e-4947.34Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CARP_NEUCR1.344e-4948.69Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
RENI_CALJA2.293e-4941.88Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
CATE_RANCA5.109e-4940.80Cathepsin E OS=Rana catesbeiana GN=CTSE PE=1 SV=1[more]
RENI_PANTR1.941e-4845.50Renin OS=Pan troglodytes GN=REN PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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