CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.373e-46
Identity = 92/191 (48.17%), Postives = 121/191 (63.35%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            YMDA YYGEI IGTPPQ F V+FDTGSSNLWV S  C  S AC  H              G++ S+QYGTG++ GFF YD+++V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +S G A      M+ +G +  P+F  +L  +QQ   GG+IVFGGVD N Y G+ T++PVTQ+ YWQ  + D
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDENLYTGELTWIPVTQELYWQITIDD 259          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 4.048e-46
Identity = 87/189 (46.03%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWVPS  C  S AC  H             NG++ S+QYG+G++ GFF YD++ V ++ V  QEF  +  EPG  F+ A+FDGI+G+ +  +++G A      M+++G +  PVFSF+L+  Q    GG ++FGGVD + Y G+  + PVTQ+ YWQ  +
Sbjct:   68 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPNQSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTVQNIKVPHQEFGLSQNEPGTNFIYAQFDGIMGMAYPSLAMGGATTALQGMLQEGALTSPVFSFYLSNQQGSQNGGAVIFGGVDNSLYTGQIFWAPVTQELYWQIGV 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.287e-46
Identity = 86/189 (45.50%), Postives = 122/189 (64.55%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWVPS  C  + AC  H             NG++ S+QYG+G++ GFF YD++ V  + V +QEF  +  EPG  F+ A+FDGI+G+ +  +++G A      M+++G +  PVFSF+L+  Q    GG ++FGGVD + Y+G+  + PVTQ+ YWQ  +
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-TQACTGHTRFNPSQSSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGMAYPSLAMGGATTALQGMLQEGALTSPVFSFYLSNQQGSQNGGAVIFGGVDNSLYQGQIYWAPVTQELYWQIGI 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_HUMAN (Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.287e-46
Identity = 92/189 (48.68%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWVPS  C  S AC  H             NG++ S+QYG+G++ GFF YD++ V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +SV  A      MV++G +  PVFS +L+ NQQ   GG +VFGGVD + Y G+  + PVTQ+ YWQ  +
Sbjct:   68 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLS-NQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGI 254          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.018e-46
Identity = 90/193 (46.63%), Postives = 125/193 (64.77%), Query Frame = 3
Query:  297 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            +++NY+DA+Y+G I IGTPPQ FTVIFDTGSSNLWVPST C  S+AC  H               E+ SI YGTG++ G   YD+VKVG +   +Q F  +  EP +TF+ A FDGILGL +  IS  +A PV+ NM  +GL+   +FS +L  +  +++G  ++FGG+D ++Y G   +VPV+ +GYWQ  M
Sbjct:   66 SMENYLDAEYFGTISIGTPPQDFTVIFDTGSSNLWVPSTYCS-SLACALHKRFNPEDSSTYQGTSETLSITYGTGSMTGILGYDTVKVGSIEDTNQIFGLSKTEPSLTFLFAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSQDLFSVYL--SSDDEKGSLVMFGGIDSSYYTGSLNWVPVSYEGYWQITM 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 9.018e-46
Identity = 104/203 (51.23%), Postives = 122/203 (60.10%), Query Frame = 3
Query:  273 DSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            DS  T +VAL N  D  Y+GEIGIGTPPQKFTVIFDTGSS LWVPS+  +                                   + + S DS        K+Q+FIEAT E    F+   FDGILGL FQ ISV    PVWYNMV QGL++   FSFWLNRN  E+EGGE+VFGG+DPNH++G HTYVPVT + YWQF +GD
Sbjct:    1 DSGST-VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAH-----------------------------------SMYESSDSS-----TYKEQDFIEATEEADNVFLNRLFDGILGLSFQTISV----PVWYNMVNQGLVKR--FSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGD 156          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45
Identity = 92/191 (48.17%), Postives = 120/191 (62.83%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWV S  C  S AC  H              G++ S+QYGTG++ GFF YD++ V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +S G A      M+ +G +  P+F  +L  +QQ   GG+IVFGGVD N Y G+ T+VPVTQ+ YWQ  + D
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDKNLYTGEITWVPVTQELYWQITIDD 259          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45
Identity = 92/189 (48.68%), Postives = 119/189 (62.96%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            L NY+D +Y+G I IG+PPQ FTVIFDTGSSNLWVPS  C  S AC  H              G S SIQYGTG++ G    D V V  L V  Q+F E+ +EPG TF+ A+FDGILGLG+  ++ G   PV+ NM+ Q L+  P+FS +++ N     G E+ FGG DP+H+ G   +VPVT++ YWQ
Sbjct:   66 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACQTHPVFHPSLSSTYREVGNSFSIQYGTGSLTGIIGADQVSVEGLTVVGQQFGESVQEPGKTFVHAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVALPMFSVYMSSN-PGGSGSELTFGGYDPSHFSGSLNWVPVTKQAYWQ 252          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.009e-45
Identity = 106/243 (43.62%), Postives = 141/243 (58.02%), Query Frame = 3
Query:  150 RIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            RI LKKM   P+ R    LE    +  R S +   F      ++    V L NY+++QYYGEIGIGTPPQ F VIFDTGS+NLWVPST C    +AC  H             NG+  +I YG+G + GF S DSV VG + V  Q F E T  P + FM+A+FDG+LG+GF   +VG   PV+ +++ QG++++ VFS + NR      GGE+V GG DP HY+G   YV +++   WQ  M
Sbjct:   30 RIPLKKM---PSVREI--LEERGVDMTRLSAEWDVFTKRSSLTDLISPVVLTNYLNSQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGRVKGFLSQDSVTVGGITV-TQTFGEVTELPLIPFMLAQFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEKVFSVYYNRGPHL-LGGEVVLGGSDPEHYQGDFHYVSLSKTDSWQITM 265          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATE_RABIT (Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.009e-45
Identity = 93/224 (41.52%), Postives = 131/224 (58.48%), Query Frame = 3
Query:  210 SEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            SE  +A +  + +Y     +  S +  ++   NY+D +Y+G I IG+PPQ FTVIFDT SSNLWVPS  C  S AC  H              G   SI YGTG++ G    D V V  L V  Q+F E+ +EPG TF+ A+FDGILGLG+  ++ G   PV+ NM+ Q L+  P+FS +++ N +   G E+ FGG D +H+ G   +VPVT++GYWQ  + +
Sbjct:   43 SEFWKAHKVDMVQYTETCTMEQSANEPLI---NYLDMEYFGTISIGSPPQNFTVIFDTVSSNLWVPSVYCT-SPACQMHPQFRPSQSNTYSEVGTPFSIAYGTGSLTGIIGADQVSVQGLTVVGQQFGESVKEPGQTFVNAEFDGILGLGYPSLAAGGVTPVFDNMMAQNLVSLPMFSVYMSSNPEGGSGSELTFGGYDSSHFSGSLNWVPVTKQGYWQIALDE 262          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PEPC_MOUSE2.373e-4648.17Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEPC_SUNMU4.048e-4646.03Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
PEPC_RHIFE5.287e-4645.50Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=... [more]
PEPC_HUMAN5.287e-4648.68Gastricsin OS=Homo sapiens GN=PGC PE=1 SV=1[more]
PEPA2_RABIT9.018e-4646.63Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CARDG_CYNCA9.018e-4651.23Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPC_RAT1.178e-4548.17Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
CATE_CAVPO1.178e-4548.68Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
RENI2_MOUSE2.009e-4543.62Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
CATE_RABIT2.009e-4541.52Cathepsin E OS=Oryctolagus cuniculus GN=CTSE PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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