CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 2.009e-45
Identity = 92/194 (47.42%), Postives = 123/194 (63.40%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSV-----KVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            L NY+D +Y+G I IG+PPQ FTVIFDTGSSNLWVPS  C  S AC  H              G+S SIQYGTG+++G    D V     +V  L V  Q+F E+  EPG TF+ A+FDGILGLG+  ++VG   PV+ NM+ Q L+  P+FS +++ N +   G E++FGG D +H+ G   +VPVT++ YWQ
Sbjct:   70 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQ 262          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.009e-45
Identity = 100/197 (50.76%), Postives = 118/197 (59.90%), Query Frame = 3
Query:  291 IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            +VAL N  D  Y+GEIGIGTPPQKFTVIFDTGSS LWVPS+  +                                        Y+S   G    K+Q+FIEAT E    F+   FDGILGL FQ ISV    PVWYNM+ QGL++   FSFWLNRN  E+EGGE+VFGG+DPNH++G HTYVPVT + YWQF +GD
Sbjct:    6 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAHSM--------------------------------------YESS--GSSTYKEQDFIEATDETDNVFLHRLFDGILGLSFQTISV----PVWYNMLNQGLVKR--FSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGD 156          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.624e-45
Identity = 107/248 (43.15%), Postives = 140/248 (56.45%), Query Frame = 3
Query:  150 RIGLKKMK-----LDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNC-YFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            RI LKKM      L+       R+ +E GE     +KK  F N       T  V L NY+D QYYGEIGIGTP Q F VIFDTGS+NLWVPST C     AC  H             NG   +I YG+G + GF S D V VG ++V  Q F E T  P + FM+AKFDG+LG+GF   +V   +PV+ +++ Q ++++ VFS + +R +    GGE+V GG DP HY+G   YV +++ G WQ  M
Sbjct:   31 RILLKKMPSVREILEERGVDMTRISAEWGEF----IKKSSFTNV------TSPVVLTNYLDTQYYGEIGIGTPSQTFKVIFDTGSANLWVPSTKCGPLYTACEIHNLYDSSESSSYMENGTEFTIHYGSGKVKGFLSQDVVTVGGIIV-TQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVDGVIPVFDHILSQRVLKEEVFSVYYSR-ESHLLGGEVVLGGSDPQHYQGNFHYVSISKAGSWQITM 266          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_MACFU (Gastricsin (Fragment) OS=Macaca fuscata fuscata GN=PGC PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.624e-45
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            YMDA Y+GEI IGTPPQ F V+FDTGSSNLWVPS  C  S AC  H             NG++ S+QYG+G++ GFF YD++ V  + V +QEF  +  EPG  F+ A+FDGI+GL +  +SV  A      MV++G +  P+FS +L+ +QQ   GG +VFGGVD + Y G+  + PVTQ+ YWQ  +
Sbjct:   57 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPTLSVDGATTAMQGMVQEGALTSPIFSVYLS-DQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGI 243          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.427e-45
Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            Y+DA Y+GEI IGTPPQ F V+FDTGSSNLWVPS  C  S AC  H             NG++ S+QYG+G++ GFF YD++ + ++ V  QEF  +  EPG  F+ A+FDGI+G+ +  +++G A      M++ G +  PVFSF+L+  Q   +GG +VFGGVD + Y G+  + PVTQ+ YWQ  +
Sbjct:   68 YLDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTGHARFNPSKSSTYSTNGQTFSLQYGSGSLTGFFGYDTMTLQNIKVPHQEFGLSQNEPGENFVYAQFDGIMGMAYPTLAMGGATTALQGMLQAGALDSPVFSFYLSNQQSSKDGGAVVFGGVDNSLYTGQIFWTPVTQELYWQIGV 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.901e-44
Identity = 96/207 (46.38%), Postives = 126/207 (60.87%), Query Frame = 3
Query:  258 PNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIV-FGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            P    DS  T+   L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S AC  H               ES SI YGTG++ GF  YD+VKVG++   +Q F  +  EPG     A FDGILGL +  IS  +A PV+ NM  +GL+ + +FS +L+    +DE G +V FGG+D ++Y G   +VPV+ +GYWQ  +
Sbjct:   55 PKAAFDSVPTE--TLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SAACSVHNQFNPEDSSTFQATSESLSITYGTGSMTGFLGYDTVKVGNIEDTNQIFGLSESEPGSFLYYAPFDGILGLAYPSISSSDATPVFDNMWNEGLVSEDLFSVYLS---SDDESGSVVMFGGIDSSYYTGSLNWVPVSYEGYWQITL 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.789e-44
Identity = 85/192 (44.27%), Postives = 121/192 (63.02%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            + NY+D+ Y+GEI IGTPPQ F V+FDTGSSNLWVPST C  S AC  H              G++ ++ YG+G++     YD+V V ++VV +QEF  +  EP   F  + FDGILG+ +  ++VGN+  V   M++QG + +P+FSF+ +R      GGE++ GGVDP  Y G+ T+ PVTQ+ YWQ  +
Sbjct:   67 ITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYCQ-SQACSNHNRFSPSQSSTFTNGGQTYTLSYGSGSLTVVLGYDTVTVQNIVVSNQEFGLSESEPTSPFYYSDFDGILGMAYPAMAVGNSPTVMQGMLQQGQLSEPIFSFYFSRQPTHQYGGELILGGVDPQLYSGQITWTPVTQEVYWQIGI 257          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.456e-43
Identity = 89/193 (46.11%), Postives = 118/193 (61.14%), Query Frame = 3
Query:  297 ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            +LKNYMD +Y+G IGIGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H                  SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL + +IS   A PV+ NM  +GL+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ  +
Sbjct:   65 SLKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCS-SPACSNHNRFNPQESSTYQGTNRPVSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYAPFDGILGLAYPQISASGATPVFDNMWNEGLVSQDLFSVYLSSDDQ--SGSVVMFGGIDSSYYSGNLNWVPVSVEGYWQITV 254          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.207e-43
Identity = 93/200 (46.50%), Postives = 119/200 (59.50%), Query Frame = 3
Query:  285 TDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCY-FSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE--GGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            T  V L NY+D QYYGEIGIGTPPQ F VIFDTGS+NLWVPST C     AC  H             NG   +I YG+G + GF S D V VG + V  Q F E T  P   FM+AKFDG+LG+GF   +VG   PV+ +++ Q ++ + VFS + +R+ +     GGEIV GG DP +Y+    YV +++ G WQ  M
Sbjct:   67 TSPVVLTNYLDTQYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSPLYTACEIHSLYDSLESSSYVENGTEFTIYYGSGKVKGFLSQDLVTVGGITV-TQTFGEVTELPLRPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILAQRVLTEDVFSVYYSRDSKNSHLLGGEIVLGGSDPQYYQENFHYVSISKPGSWQIRM 265          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.592e-42
Identity = 86/192 (44.79%), Postives = 121/192 (63.02%), Query Frame = 3
Query:  306 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            +Y+DA Y+GEI IGTP Q F V+FDTGSSNLWVPS  C  S AC  H               ++ S++YG+G++ GFF YD+  + ++ V +QEF  +  EPG  F+ A+FDGI+GL +  +SVG+A P    MV+ G I   VFSF+L+ +QQ  +GG +V GGVD + Y G   + PVT++ YWQ  + +
Sbjct:   67 DYLDAAYFGEISIGTPSQNFLVLFDTGSSNLWVPSVYCQ-SEACTTHNRFNPSKSSTFYTYDQTFSLEYGSGSLTGFFGYDTFTIQNIEVPNQEFGLSETEPGTNFLYAEFDGIMGLAYPSLSVGDATPALQGMVQDGTISSSVFSFYLS-SQQGTDGGALVLGGVDSSLYTGDIYWAPVTRELYWQIGIDE 256          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
CATE_HUMAN2.009e-4547.42Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
CARDH_CYNCA2.009e-4550.76Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
RENI_RAT2.624e-4543.15Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPC_MACFU2.624e-4547.62Gastricsin (Fragment) OS=Macaca fuscata fuscata GN... [more]
PEPC_SORUN3.427e-4545.50Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPA3_RABIT2.901e-4446.38Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_MONDO3.789e-4444.27Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
PEPA_CANFA2.456e-4346.11Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
RENI_SHEEP3.207e-4346.50Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPC_RABIT1.592e-4244.79Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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