CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 96/241 (39.83%), Postives = 133/241 (55.19%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYG----------------FPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            RL  E G+ LR  +++ G                FP+   D        L N +D +YYG I IGTPPQ FTV+FDTGSSNLWVPS +C  S AC  H              G++ SI YGTG + G    D+V V  L+  +Q F  +T EPG  F+  KFDGILGLG+  ++     PV+ NMV + L++  +FS +L+R   E  G  +VFGG+D +++ G   ++PV+ +GYWQ +M
Sbjct:   19 RLPLERGKKLREILREKGLLHHFLQHHRYDIGTKFPHAFPDVLTVVTEPLLNTLDMEYYGTISIGTPPQDFTVVFDTGSSNLWVPSVSCT-SPACQSHQMFNPSQSSTYKSTGQNLSIHYGTGDMEGTVGCDTVTVASLMDTNQLFGLSTSEPGQFFVYVKFDGILGLGYPSLAADGITPVFDNMVNESLLEQNLFSVYLSR---EPMGSMVVFGGIDESYFTGSINWIPVSYQGYWQISM 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 86/192 (44.79%), Postives = 118/192 (61.46%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTV+FDTGSSNLWVPS  CY S+AC  H               ++ SI YGTG++ G   YD+VKVG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  Q L+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ ++
Sbjct:   68 LENYLDVEYFGTIGIGTPAQNFTVVFDTGSSNLWVPSVYCY-SLACMDHNLFNPQDSSTYRATSKTVSITYGTGSMTGILGYDTVKVGGISDTNQIFGLSETEPGFFLYFAPFDGILGLAYPSISSSGATPVFDNIWNQRLVSQDLFSVYLSADDQ--SGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.632e-42
Identity = 87/192 (45.31%), Postives = 117/192 (60.94%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTV+FDTGSSNLWVPS  C  S+AC  H               E+ SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPVT +GYWQ  +
Sbjct:   68 LENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYCS-SLACTNHNRFNPEDSSTYQSTSETVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQ--SGSVVIFGGIDSSYYTGSLNWVPVTVEGYWQITV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.900e-42
Identity = 95/247 (38.46%), Postives = 142/247 (57.49%), Query Frame = 3
Query:  147 VRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYG---FPNNLRDSEDTDIV-ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            +++ LKK+K   + R   R +   G+ L+    ++    F N L  + D  ++    +YMDA Y+G+I +GTPPQ F V+FDTGSSNLWVPS  C  S+AC  H               +S S++YGTG++ G F YD++ + D+ V  QEF  +  EPG  F+ A+FDGILGLG+  +S G A      ++++G +   +FS +L   Q  DE G+++ GGVD + Y G   + PVTQ+ YWQ  +
Sbjct:   19 IKVPLKKIK---SIREVLREKGLLGDFLKNHKPQHARKFFRNRLAKTGDFSVLYEPMSYMDAAYFGQISLGTPPQSFQVLFDTGSSNLWVPSVYCS-SLACTTHTRFNPRDSSTYVATDQSFSLEYGTGSLTGVFGYDTMTIQDIQVPKQEFGLSETEPGSDFVYAEFDGILGLGYPGLSEGGATTAMQGLLREGALSQSLFSVYLGSQQGSDE-GQLILGGVDESLYTGDIYWTPVTQELYWQIGI 260          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.900e-42
Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYGFPNNL----------RDSEDTDIVA--LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            R+    G++LR ++K+ G   +           + S   ++ +  L NY+D QY+G+I IGTPPQ+FTV+FDTGSS+LWVPS  C  SVAC  H               +S SIQYGTG++ G   YD+V V  +V   Q    +T+EPG  F  ++FDGILGL +  ++   +VPV+ NM+ + L+   +FS +++RN+Q   G  +  G +DP++Y G   ++PVT + YWQF +
Sbjct:   21 RIPLHKGKSLRRALKERGLLEDFLKNHQHAVSRKHSNSREVASEFLTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAQDLFSVYMSRNEQ---GSMLTLGAIDPSYYTGSLHWIPVTVQEYWQFTV 253          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.032e-41
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L NYMD +Y+G IGIGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H               ++ SI YGTG++ G   YD+V+V  +   +Q F  +  EPG     + FDGILGL +  I+   A PV+ NM  QGL+   +FS +L+ N Q   G  ++FGG+D ++Y G   +VP++ +GYWQ  +
Sbjct:   67 LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCS-SPACSNHNRFNPQKSSTFQSTSQTLSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQTEPGSFLYYSPFDGILGLAYPNIASSGATPVFDNMWNQGLVSQDLFSVYLSSNDQ--SGSVVIFGGIDSSYYTGNLNWVPLSSEGYWQITV 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41
Identity = 86/192 (44.79%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S+AC  H               +  SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ N  +D G  ++ GG+D ++Y G   +VPV+ +GYWQ  +
Sbjct:   65 LENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSN--DDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITL 253          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.760e-41
Identity = 95/228 (41.67%), Postives = 132/228 (57.89%), Query Frame = 3
Query:  210 SEHGEALRASVKKYGF---PNNLRDSEDTDIV---ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            SEHG  L+  +KK+ F         +E   ++    L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S+AC  H                + SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ ++
Sbjct:   33 SEHG-LLKDFLKKHNFNPASKYFPQAEAPTLIDEQPLENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SLACTNHNRFNPQDSSTYQSTSGTVSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWNQGLVSQDLFSVYLSADDQ--SGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.002e-41
Identity = 87/192 (45.31%), Postives = 116/192 (60.42%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S AC  H               E+ SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ N  E+ G  ++FG +D ++Y G   +VPV+ +GYWQ  +
Sbjct:   52 LQNYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSIYCS-SEACTNHNRFNPQDSSTYEATSETLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSSN--EESGSVVIFGDIDSSYYSGSLNWVPVSVEGYWQITV 240          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41
Identity = 86/192 (44.79%), Postives = 115/192 (59.90%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L NYMD +Y+G I IGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H               ++ SI YGTG++ G   YD+V+V  +   +Q F  +  EPG     + FDGILGL +  IS   A PV+ NM  QGL+   +FS +L+ N Q   G  ++FGG+D ++Y G   +VP++ +GYWQ  +
Sbjct:   67 LVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYCS-SPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFSVYLSSNDQ--SGSVVMFGGIDSSYYTGSLNWVPLSSEGYWQITV 255          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PEPE_CHICK2.715e-4239.83Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1[more]
PEPA4_MACFU2.715e-4244.79Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PEPA_HUMAN4.632e-4245.31Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
PEPC_CAVPO7.900e-4238.46Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
CHYM_CALJA7.900e-4238.82Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPA_SUNMU1.032e-4144.79Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_PIG1.348e-4144.79Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA2_MACFU1.760e-4141.67Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_BOVIN3.002e-4145.31Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPA_SORUN3.921e-4144.79Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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