CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.121e-41
Identity = 86/193 (44.56%), Postives = 118/193 (61.14%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIV-FGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NYMD +Y+G IGIGTPPQ+FTVIFDTGSSNLWVPS  C  S AC  H               +  S+ YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  I+   A PV+ N+  QGL+   +FS +L+ N   D+GG +V FGG+D +++ G   +VP++ + YWQ  +
Sbjct:   66 LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYCS-SPACSNHNRFNPQQSSTYQGTNQKLSVAYGTGSMTGILGYDTVQVGGITDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSIASSGATPVFDNIWNQGLVSQDLFSVYLSSN---DQGGSVVMFGGIDSSYFTGNLNWVPLSSETYWQITV 254          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.688e-41
Identity = 86/192 (44.79%), Postives = 117/192 (60.94%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S+AC  H                + SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ ++
Sbjct:   68 LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSADDQ--SGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 6.688e-41
Identity = 86/192 (44.79%), Postives = 117/192 (60.94%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+NY+D +Y+G IGIGTP Q FTVIFDTGSSNLWVPS  C  S+AC  H                + SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     A FDGILGL +  IS   A PV+ N+  QGL+   +FS +L+ + Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ ++
Sbjct:   68 LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCS-SLACTNHNLFNPQDSSTYQSTSGTLSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISSSGATPVFDNIWDQGLVSQDLFSVYLSADDQ--SGSVVIFGGIDSSYYTGSLNWVPVSVEGYWQISV 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.541e-40
Identity = 95/246 (38.62%), Postives = 137/246 (55.69%), Query Frame = 3
Query:  144 LVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMGD 881
            +V + LKKMK         R        L   +++  +  +  DS+ T I  L+NY+D  Y G I IGTPPQ+F V+FDTGS+NLWVP   C  S ACY H              G   +I YG+G I GF   D+V++G+LV  +Q F  +  E G  F    FDGILGL F  + + + +P++ N+   G   +PVF+F+LN N  + EG  ++FGGVD  +YKG+  ++PV+Q  +WQ +M +
Sbjct:   16 IVILPLKKMK-------TLRETLREKNLLNNFLEEQAYRLSKNDSKIT-IHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYG--FDSLPFDGILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLNTN--KPEGSVVMFGGVDHRYYKGELNWIPVSQTSHWQISMNN 248          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.319e-40
Identity = 85/192 (44.27%), Postives = 115/192 (59.90%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L NY+D +Y+G IGIGTP Q+FTVIFDTGSSNLWVPS  C  S AC  H               ++ SI YGTG++ G   YD+V+VG +   +Q F  +  EPG     + FDGILGL +  IS   A PV+ N+  Q L+   +FS +L+ N Q   G  ++FGG+D ++Y G   +VPV+ +GYWQ  +
Sbjct:   67 LVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYCS-SPACTNHNRFNPQESSTYQATSQTLSIAYGTGSMTGILGYDTVQVGGIADTNQIFGLSETEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNIWNQDLVSQDLFSVYLSSNDQ--SGSVVMFGGIDSSYYTGSLNWVPVSAEGYWQITV 255          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 165.236 bits (417), Expect = 4.335e-40
Identity = 89/237 (37.55%), Postives = 136/237 (57.38%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYGFPNNLRDSEDTDI------------VALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            R+    G++LR ++K++G   +    +   I            V L NY+D+QY+G+I +GTPPQ+FTV+FDTGSS+ WVPS  C  S AC  H              G+  SI YGTG++ G   YD+V V ++V   Q    +T+EPG  F  A+FDGILG+ +  ++   ++PV+ NM+ + L+   +FS +++RN QE     +  G +DP++Y G   +VPVT + YWQF +
Sbjct:   21 RIPLYKGKSLRKALKEHGLLEDFLQKQQYGISSKYSGFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQE---SMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTV 253          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG_HORSE (Pregnancy-associated glycoprotein OS=Equus caballus GN=PAG PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.394e-40
Identity = 94/249 (37.75%), Postives = 141/249 (56.63%), Query Frame = 3
Query:  144 LVRIGLKKMKLDPNNRLAARLESEHGEALRASVKKYGFPNN---LRDSEDTDIV--ALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            LV I L K+K       + R      + L+  ++KY F      L    D+ +    ++NY+D  Y G I +GTPPQ+F VIFDTGS++LWVPS  C  S AC  H             +G+   + YGTG ++GF  YD++K+  LV ++Q F  +  EP     +A FDGILGL +  +SV    PV+ N+  QGL+   +F+F+L+R  +  +G  ++FGGVDP++Y G+  +VPV++  YWQ +M
Sbjct:   16 LVTIPLVKIK-------SLRENLREKDMLKEYLEKYPFRLTHKLLHKHADSGVAFEPMRNYLDIAYMGIISVGTPPQEFQVIFDTGSADLWVPSIYCS-SPACSNHNTFNPLRSSTFVASGQPIKLIYGTGKMSGFVGYDTIKISSLVDRNQAFGLSVEEPDKILELATFDGILGLSYPSLSVKGVTPVFDNLWNQGLLSQKLFAFYLSRKGK--KGSVVMFGGVDPSYYTGELHWVPVSKPLYWQISM 254          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.261e-39
Identity = 83/189 (43.92%), Postives = 114/189 (60.32%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            L+NY+D  Y G I IGTPPQ+F+V+FDTGSS+LWVPS  C  S AC  H              G+S  ++YG+G ++GF   D+V++G L    Q F  +  E G  F  A FDGILGL +  I++     V  N+ KQ  I +PVF+F+L  +  ++EG  ++FGGVD  +YKG   +VP+TQ  YWQ
Sbjct:   68 LRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYCK-SKACVTHRSFNPSHSSTFHDRGKSIKLEYGSGKMSGFLGQDTVRIGQLTSTGQAFGLSKEETGKAFEHAIFDGILGLAYPSIAIKGTTTVIDNLKKQDQISEPVFAFYL--SSDKEEGSVVMFGGVDKKYYKGDLKWVPLTQTSYWQ 253          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.810e-39
Identity = 77/187 (41.18%), Postives = 113/187 (60.43%), Query Frame = 3
Query:  306 NYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            NY+D+ Y+GEI IGTPPQ F ++FDTGSSNLWVPST C  S AC  H             + ++ ++ YG G++     YD+V V ++V+ +Q F  +  EP   F  + FDGILG+ +  ++V N   V  NM++QG +  P+FSF+ +     + GGE++ GGVD   Y G+  + PVT++ YWQ
Sbjct:   68 NYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGGVDTQFYSGEIVWAPVTREMYWQ 253          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.810e-39
Identity = 84/211 (39.81%), Postives = 127/211 (60.19%), Query Frame = 3
Query:  243 KKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            ++YG  +      +   V L NY+D+QY+G+I +GTPPQ+FTV+FDTGSS+ WVPS  C  S AC  H              G+  SI+YGTG++ G   YD+V V ++V   Q    +T+EPG  F  A+FDGILG+ +  ++   +VPV+ NM+ + L+   +FS +++R+ Q   G  +  G +DP++Y G   +VPVT + YWQF +
Sbjct:   47 QQYGVSSEYSGFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFSVYMDRSGQ---GSMLTLGAIDPSYYTGSLHWVPVTLQKYWQFTV 253          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PEPA_RHIFE5.121e-4144.56Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA_MACMU6.688e-4144.79Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA1_MACFU6.688e-4144.79Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
PAG2_BOVIN2.541e-4038.62Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
PEPA_CALJA3.319e-4044.27Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
CHYM_BOVIN4.335e-4037.55Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
PAG_HORSE7.394e-4037.75Pregnancy-associated glycoprotein OS=Equus caballu... [more]
PAG2_PIG1.261e-3943.92Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
PEPB_CANFA2.810e-3941.18Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
CHYM_SHEEP2.810e-3939.81Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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