CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.176e-39
Identity = 94/239 (39.33%), Postives = 129/239 (53.97%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYGF--------PNNLRDSEDTDIVA------LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            R+  + G++LR  +K +G         P N        + A      + NYMDA YYG I IGTP Q F+VIFDTGSSNLWVPS  C  S AC  H               E+  I YGTG+++G   YD+V V  + V++Q F  +  EPG  F    FDGILGL F  IS   A PV+ NM+ Q L+   +FS +L+++   + G  ++FGG+DPN+      +VP++ + YWQ  M
Sbjct:    4 RVPLKKGKSLRKQLKDHGLLEDFLKKHPYNPASKYHPVLTATESYEPMTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCKSS-ACSNHKRFDPSKSSTYVSTNETVYIAYGTGSMSGILGYDTVAVSSIDVQNQIFGLSETEPGSFFYYCNFDGILGLAFPSISSSGATPVFDNMMSQHLVAQDLFSVYLSKD--GETGSFVLFGGIDPNYTTKGIYWVPLSAETYWQITM 239          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.630e-37
Identity = 82/189 (43.39%), Postives = 109/189 (57.67%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            +KN  D +YYG I IGTPP+ F VIFDTGSSNLWV S++C  + AC  H              G++  + YGTG + G    D+V VG     +QE  E+  EPG     A FDGILGL +  I+   AVPV+ NM  Q L++  +FSF+L+       G E++ GGVD +HY G   ++PVT + YWQ
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGA--NGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQ 191          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 5.859e-37
Identity = 83/199 (41.71%), Postives = 110/199 (55.28%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYF-SVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGD----LVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGN-AVPVWYNMVKQGLIQDPVFSFWLNRNQQE-DEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L +Y +AQYYG + IGTPPQ F V+FDTGSSNLWVP  NC F  +AC  H              G S  IQYGTG++ G    D V  G        K+Q    AT EPG+TF+ AKFDGI G+G+  ISV   + P+        + ++ +F+FWL+R+  +   GGEI     DPNHY G   + P+  + YW+  +
Sbjct:   61 LSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDPNHYVGNIAWEPLVSEDYWRIKL 259          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.305e-36
Identity = 81/195 (41.54%), Postives = 115/195 (58.97%), Query Frame = 3
Query:  282 DTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQ 866
            D     L+NY+D  Y G I IGTPPQ+F V+ DTGS++LWVPS  C  S AC  H             +G   +I YG+G ++GF +YD+V++  LV   Q F  + +EPG     A FDGILGL +  +S     PV+ N+  QGLI   +F+F+L  + +E+ G  ++ GGVDP++Y G   +VPV++  YWQ
Sbjct:   60 DVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYCS-SPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNLWAQGLISQNLFAFYL--SSKEERGSMLMLGGVDPSYYSGDLHWVPVSRPLYWQ 251          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.642e-34
Identity = 77/212 (36.32%), Postives = 119/212 (56.13%), Query Frame = 3
Query:  240 VKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            ++K+G   +L  S     + L NY+D  Y G I IGTPPQ F+VIFDT SS+LWVPS  C+ S AC  H             +  +  +   +G ++G   YD+V++G    ++Q F  +  EP      A FDG+LGLG+  +++    PV+ N+ KQG I +PVF+ +L+ N +  +G  ++ GGVD N + G   +VP++ + YWQ  +
Sbjct:   49 IQKFGLKGSLC-SPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLSTNTK--KGSVLMIGGVDNNFFTGNLKWVPLSARNYWQITL 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 7.919e-34
Identity = 77/194 (39.69%), Postives = 113/194 (58.25%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSV--ACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVA----KFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            L+N MD  Y G I IGTPPQ+F V+FDTGSS+L VPS NC       C                  ++  I +G+G + GF ++D+V++GDLV  DQ F       G+ F+ +     FDGILGL + +IS   A+P++  +  +G   +PVF+F+LN+++Q  EG  ++FGGVD  +YKG+  +VP+   G W
Sbjct:   63 LRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPF-------GLIFLESWLDIPFDGILGLNYPKISFSGAIPIFDKLKNEGAFSEPVFAFYLNKDKQ--EGSVVMFGGVDHRYYKGELNWVPLIHPGEW 247          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 3.009e-33
Identity = 77/192 (40.10%), Postives = 112/192 (58.33%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            L+N  D  Y G I IGTPPQ+F V+FDT SS+LWVPS  C  S AC  H               ++  I YG+G + G   +D+V++G+LV  DQ F  +  E G  F    +DG+LGL +  IS   A+P++  +  Q  I +PVF+F+L+++  E EG  ++FGGVD  +Y+G+  +VP+ Q G W  +M
Sbjct:   63 LRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYG--FEGRIYDGVLGLNYPNISFSGAIPIFDKLKNQRAISEPVFAFYLSKD--EREGSVVMFGGVDHRYYEGELNWVPLIQAGDWSVHM 249          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 4.209e-27
Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 3
Query:  288 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV--TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            D V L +  +  YYGE  IG   QKF  IFDTGS+NLWVPS  C  ++ C                +G    + Y +G ++GFFS D V + +L     +FIE T   G    + + +FDGI+GLG++++S+G+  PV   +  Q  I+  VF+F+L  + +    G +  GG++   Y+G+ TY  +    YWQ ++
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHK--GYLTIGGIEDRFYEGQLTYEKLNHDLYWQVDL 320          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.209e-27
Identity = 68/198 (34.34%), Postives = 105/198 (53.03%), Query Frame = 3
Query:  288 DIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV--TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            D V L +  +  YYGE  IG   QKF  IFDTGS+NLWVPS  C  ++ C                +G    + Y +G ++GFFS D V + +L     +FIE T   G    + + +FDGI+GLG++++S+G+  PV   +  Q  I+  VF+F+L  + +    G +  GG++   Y+G+ TY  +    YWQ ++
Sbjct:  127 DSVTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYTLGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYLPFDDKHK--GYLTIGGIEDRFYEGQLTYEKLNHDLYWQVDL 320          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: PLM2_PLAFA (Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.037e-25
Identity = 70/242 (28.93%), Postives = 120/242 (49.59%), Query Frame = 3
Query:  201 RLESEHGEALRASVKKYGFPNNLRDS---------------EDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGV--TFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNM 875
            ++E+ H   L+ ++K +   N +++S                  D + L ++ +  +YG+  +G   Q FT I DTGS+NLWVPS  C  +  C                +G    + Y +G ++GFFS D V VG+L +   +FIE     G   T+  + FDGILGLG++++S+G+  P+   +  Q  I++ +F+F+L  + +    G +  GG++   Y+G  TY  +    YWQ  +
Sbjct:   85 KVENAHDRILK-TIKTHKLKNYIKESVNFLNSGLTKTNYLGSSNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKC-TTAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSGTVSGFFSKDLVTVGNLSL-PYKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHT--GFLTIGGIEERFYEGPLTYEKLNHDLYWQITL 321          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PEPA_CHICK8.176e-3939.33Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
PEP2B_GADMO2.630e-3743.39Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
ASP3_CAEEL5.859e-3741.71Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PEPAF_RABIT1.305e-3641.54Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_PIG4.642e-3436.32Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PAG1_SHEEP7.919e-3439.69Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
PAG1_BOVIN3.009e-3340.10Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
PLM1_PLAFA4.209e-2734.34Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF74.209e-2734.34Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
PLM2_PLAFA1.037e-2528.93Plasmepsin-2 OS=Plasmodium falciparum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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