CK938700

Overview
NameCK938700
Unique NameCK938700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3846 contig Csv1_Contig3846:128..1009. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP1_RHINI (Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.037e-25
Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 3
Query:  315 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPV-TQKGYW 863
            D +YYGE+ +GTP  K  + FDTGSS++W  ST C  S     H             +G + SI YG G+ A G  + D+V +G L++K Q  IE  +     F     DG+LGLGF  I+   G   PV  N++ QGLI  P+F  +L + Q    GGE +FGG D + +KG  T VP+   +G+W
Sbjct:   79 DVEYYGEVTVGTPGIKLKLDFDTGSSDMWFASTLC--SSCSNSHTKYDPKKSSTYAADGRTWSISYGDGSSASGILATDNVNLGGLLIKKQT-IELAKRESSAFATDVIDGLLGLGFNTITTVRGVKTPV-DNLISQGLISRPIFGVYLGK-QSNGGGGEYIFGGYDSSKFKGSLTTVPIDNSEGFW 260          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_RHICH (Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 6.719e-25
Identity = 71/189 (37.57%), Postives = 100/189 (52.91%), Query Frame = 3
Query:  315 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPS---TNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPV-WYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPV-TQKGYW 863
            D +YYG++ IGTP +KF + FDTGSS+LW+ S   TNC      Y               +G + SI YG G+ A G  + D+V +G L++K Q  IE  +    +F     DG+LGLGF  I+    V     N++ QGLI  P+F  +L +      GGE +FGG D   +KG  T VP+   +G+W
Sbjct:   82 DVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKY-----DPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQT-IELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGK-ASNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWW 263          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP3_RHINI (Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.497e-24
Identity = 78/225 (34.67%), Postives = 109/225 (48.44%), Query Frame = 3
Query:  225 ALRASVKKYGFPNNLRDSEDTD------IVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPS---TNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            A++ ++ KY    ++  S  T       +     Y D +YYGE+ +GTP     + FDTGSS+LW  S   TNC  S   Y               +G + SI YG G+ A G    D+V +G L ++ Q  IE  R     F     DG+LGLGF  I+   G   PV  N++ QGLI +PVF  +L + +    GGE +FGG D + +KG  T +PV     W
Sbjct:   45 AIQKAIAKYHRHRSVSSSNSTSTDGIGYVPVTDYYNDIEYYGEVTVGTPGVTLKLDFDTGSSDLWFASSLCTNCGSSQTKY-----NPNESSTYARDGRTWSISYGDGSSASGILGTDTVILGGLTIRHQT-IELARREASQFQSGPSDGLLGLGFDSITTVRGVKTPV-DNLISQGLISNPVFGVYLGK-ESNGGGGEYIFGGYDSSKFKGSLTTIPVDNSNGW 261          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP5_RHINI (Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 7.429e-24
Identity = 71/191 (37.17%), Postives = 99/191 (51.83%), Query Frame = 3
Query:  309 YMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPS---TNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            Y D +Y+G++ +GTP     + FDTGSS+LW  S   TNC +S   Y               +G + SI YG G+ A G    D+V +G L ++ Q  IE  R    +F     DG+LGLGF  I+   G   PV  N++ QGLI +PVF  +L + +    GGE +FGG D + +KG  T +PV     W
Sbjct:   80 YNDIEYFGQVKVGTPGVTLKLDFDTGSSDLWFASSLCTNCGYSQTKY-----NPNQSRTYAKDGRAWSISYGDGSSASGILGTDTVVLGGLTIQRQT-IELARREASSFQNGPSDGLLGLGFNSITTVRGVKTPV-DNLISQGLISNPVFGVYLGK-ESNGGGGEYIFGGYDSSKFKGSLTTIPVDNSNGW 262          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.429e-24
Identity = 65/198 (32.83%), Postives = 93/198 (46.97%), Query Frame = 3
Query:  300 LKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVA------KFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDE--GGEIVFGGVDPNHYKGKHTYVPVTQKGYWQF 869
            + ++ D +Y G I IGTP Q F V+ DTGSSNLW+P   C     C                NG+S +IQYG+G  AG    D+V+ G     D +    T   G+   ++        DGILGL F  ++V   VP   N + QG++  P+FS WL      +   GG   +G +D  +      Y P++   Y+QF
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFG--AKGDSQLSVPTTTFGIASKISADFKNDATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTTNCGALVAYQPLSSATYYQF 256          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_SYNRA (Syncephapepsin OS=Syncephalastrum racemosum GN=SPSR PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.267e-23
Identity = 73/186 (39.25%), Postives = 93/186 (50.00%), Query Frame = 3
Query:  315 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEIS--VGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            D +YY  + +GTP Q   + FDTGSS+LW  ST C    +  F               G+S  I YG G+ A G  + D+V++G L +  Q    ATRE   +F     DGILGLGF  IS   G   PV  N++ Q LI  P+F  WL + Q E  GGE VFGG + +H  G  T V V     W
Sbjct:   86 DVEYYATVSVGTPAQSIKLDFDTGSSDLWFSSTLCTSCGSKSFDPTKSSTYKKV----GKSWQISYGDGSSASGITATDNVELGGLKITGQTIELATRESS-SFSSGAIDGILGLGFDTISTVAGTKTPV-DNLISQNLISKPIFGVWLGK-QSEGGGGEYVFGGYNTDHIDGSLTTVKVDNSQGW 264          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP4_RHINI (Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.815e-23
Identity = 69/188 (36.70%), Postives = 96/188 (51.06%), Query Frame = 3
Query:  315 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPS---TNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPV-WYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            D +YYGE+ +GTP  K  + FDTGSS+LW  S   TNC  S   Y               +G + SI YG G+ A G    D+V +G L +K+Q  IE  +    +F     DG+LGLGF  I+  + V     N++ QGLI +PVF  +L + +    GGE +FGG D + + G  T + V     W
Sbjct:   87 DIEYYGEVTVGTPGIKLKLDFDTGSSDLWFASTLCTNCGSSQTKY-----DPSQSSTYAKDGRTWSISYGDGSSASGILGKDTVNLGGLKIKNQ-IIELAKREASSFSSGPSDGLLGLGFDSITTVSGVQTPMDNLISQGLISNPVFGVYLGK-ESNGGGGEYIFGGYDSSKFSGDLTTIAVDNSNGW 267          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP2_RHINI (Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 73/208 (35.10%), Postives = 102/208 (49.04%), Query Frame = 3
Query:  261 NNLRDSEDTDIVALKNYM-DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPS---TNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIA-GFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISV--GNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYW 863
            +N   +E T  V + +Y  D +YYG++ +GTP     + FDTGSS+LW  S   TNC  S   Y               +G + SI YG G+ A G    D+V +G L +  Q  IE  +    +F      G+LGLGF  I+   G   PV  N++ QGLI  P+F  +L + +    GGE +FGG D + Y G  T +PV     W
Sbjct:   62 SNSTSTEGTGSVPVTDYYNDIEYYGKVTVGTPGVTLKLDFDTGSSDLWFASTLCTNCGSSQTKY-----NPNQSSTYAKDGRTWSISYGDGSSASGILGTDTVTLGGLKITKQT-IELAKREATSFQSGPSYGLLGLGFDTITTVRGVKTPV-DNLISQGLISKPIFGVYLGK-ESNGGGGEYIFGGYDSSKYSGSLTTIPVDNSNGW 261          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: ASPR1_PHARH (Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 68/189 (35.98%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  315 DAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSY-DSVKVGDLVVKDQEFIEATREPGVTFMVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPVTQKGYWQFNMG 878
            ++ + G I IG   Q FTV +DTGSS+LWVPS+ C  S AC  H                + SI YG G+ A    Y D+V    L    Q F   T E   +F     DGI GLG+  ++  +    +++++ QG +  PVFSF L     E     +  GG++  HY G  TY PVTQK YW   +G
Sbjct:   94 ESLWTGPITIGG--QSFTVDWDTGSSDLWVPSSACS-SAACNAHHKYTLTSTGKKQSG--TFSISYGDGSSASGPVYKDNVVASGLQATSQVFGAVTSESS-SFSSDPSDGISGLGWPALAQLSGTSYFWSLINQGTVTSPVFSFRLATTNSE-----LYLGGINSAHYTGAITYTPVTQKAYWTIALG 271          
BLAST of CK938700 vs. ExPASy Swiss-Prot
Match: CARP_RHIPU (Mucorpepsin OS=Rhizomucor pusillus PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.397e-19
Identity = 70/232 (30.17%), Postives = 101/232 (43.53%), Query Frame = 3
Query:  207 ESEHGEALRASVKKYGFPNNLRDSEDTDIVALKNYMDAQYYGEIGIGTPPQKFTVIFDTGSSNLWVPSTNCYFSVACYFHXXXXXXXXXXXXXNGESASIQYGTGAIAGFFSYDSVKVGDLVVKDQEFIEATREPGVTFMVAK-----FDGILGLGFQEISVGNAV------PVWYNMVKQGLIQDPVFSFWLNRNQQEDEGGEIVFGGVDPNHYKGKHTYVPV--TQKGYW 863
            +++HG+  +A+ K  G           D   L ++   +Y   + IGTP Q F ++FDTGSS+ WVP   C  S  C                   + +I YGTG   G +  DS+ VG   VK Q         G T   +       DG+ G  + + +   A        V  N+ KQGLI  PVFS ++N N   D GG++VFGG +     G   Y  V  ++ GY+
Sbjct:   49 QTKHGQ--QAAEKLGGIKAFAEGDGSVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTGGANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGMFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTN---DGGGQVVFGGANNTLLGGDIQYTDVLKSRGGYF 275          
The following BLAST results are available for this feature:
BLAST of CK938700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
CARP1_RHINI1.037e-2538.50Rhizopuspepsin-1 OS=Rhizopus niveus GN=RNAP PE=1 S... [more]
CARP_RHICH6.719e-2537.57Rhizopuspepsin OS=Rhizopus chinensis PE=1 SV=2[more]
CARP3_RHINI1.497e-2434.67Rhizopuspepsin-3 OS=Rhizopus niveus PE=3 SV=1[more]
CARP5_RHINI7.429e-2437.17Rhizopuspepsin-5 OS=Rhizopus niveus PE=3 SV=2[more]
ASP6_CAEEL7.429e-2432.83Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]
CARP_SYNRA1.267e-2339.25Syncephapepsin OS=Syncephalastrum racemosum GN=SPS... [more]
CARP4_RHINI4.815e-2336.70Rhizopuspepsin-4 OS=Rhizopus niveus PE=3 SV=1[more]
CARP2_RHINI3.121e-2235.10Rhizopuspepsin-2 OS=Rhizopus niveus PE=3 SV=2[more]
ASPR1_PHARH1.894e-1935.98Aspartic protease OS=Phaffia rhodozyma GN=pr1 PE=1... [more]
CARP_RHIPU9.397e-1930.17Mucorpepsin OS=Rhizomucor pusillus PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_D12 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938700 ID=CK938700; Name=CK938700; organism=Citrus sinensis; type=EST; length=882bp
GGGGATTCTTTCGTTTGCGTTACGAGTCGACTTTGATCTTTCAAGTTTCG
GCGATCATGGGAACCAAAATCAGAGCAGTACCGTTGTCTTTGTTCCTCTC
AAGCCTTTTGTTTTCTCTGGTGGCTTCTGTGTCCAATGATGGATTGGTTA
GAATAGGGCTGAAAAAGATGAAATTGGATCCCAACAACCGGCTTGCTGCC
CGGCTGGAGTCCGAGCATGGCGAGGCATTGAGAGCTTCTGTTAAGAAATA
CGGATTTCCTAATAATCTCCGAGACTCTGAGGATACTGATATTGTTGCAT
TGAAAAACTATATGGATGCTCAGTACTACGGTGAGATTGGTATTGGTACT
CCTCCACAGAAGTTCACTGTAATCTTTGACACAGGTAGCTCTAATTTGTG
GGTGCCTTCAACTAACTGTTATTTCTCGGTTGCTTGTTACTTTCATTCCA
AGTACAAGTCAAGCCAATCCAGTACATACAAGAAGAATGGTGAATCTGCT
TCTATTCAGTATGGTACTGGAGCTATTGCTGGTTTCTTTAGTTATGACAG
TGTCAAAGTTGGTGACCTGGTTGTCAAAGATCAGGAATTTATTGAGGCAA
CCAGGGAGCCTGGTGTCACATTTATGGTGGCCAAGTTTGATGGCATATTA
GGACTTGGGTTTCAAGAGATTTCAGTTGGAAATGCTGTCCCAGTTTGGTA
CAACATGGTCAAACAAGGCCTAATTCAGGATCCAGTTTTTTCATTTTGGC
TTAACCGCAATCAACAGGAAGATGAAGGTGGTGAAATTGTCTTCGGTGGT
GTTGATCCAAATCATTACAAAGGCAAGCACACTTATGTTCCTGTGACGCA
GAAAGGCTACTGGCAGTTTAACATGGGTGACN
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