CK938692

Overview
NameCK938692
Unique NameCK938692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:59..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.830e-62
Identity = 116/144 (80.56%), Postives = 125/144 (86.81%), Query Frame = 2
Query:   86 FIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            FIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKHY DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP +SA GTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G   WQSSLH  IYE
Sbjct:    1 FIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESAAGTIRGDFAIDIGRNVIHGSDAVESARKEIALWFPEGIAEWQSSLHSCIYE 144          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_SACOF (Nucleoside diphosphate kinase 1 OS=Saccharum officinarum GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.830e-62
Identity = 113/148 (76.35%), Postives = 125/148 (84.46%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            ME TFIMIKPDGVQRGL+GEII RFEKKGF LK LKL+ V+R FAEKHY DLSSKPFF  L++YI SGPVVAM+WEG+ VV TGR IIGATNP  S PGTIRGD A+  GRN+IHGSDS+ESA KEIALWFP+G  +WQSS HPWIYE
Sbjct:    1 MESTFIMIKPDGVQRGLIGEIISRFEKKGFYLKALKLVNVERSFAEKHYADLSSKPFFQGLVDYIISGPVVAMVWEGKSVVTTGRKIIGATNPLVSEPGTIRGDFAVDIGRNVIHGSDSIESANKEIALWFPEGLADWQSSQHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.220e-59
Identity = 104/148 (70.27%), Postives = 125/148 (84.46%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQ+FIMIKPDGVQRGL+G+II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.220e-59
Identity = 104/148 (70.27%), Postives = 125/148 (84.46%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPINWQSSLHPWIYE 517
            MEQ+FIMIKPDGVQRGL+G+II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:    1 MEQSFIMIKPDGVQRGLIGDIISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.454e-51
Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 2
Query:   71 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIYE 517
            E+E+T+IMIKPDGVQRGLVGEII RFEKKGF L GLKL    +  AE+HY+DL SKPFF  LI+YITSGPVV M WEG GVV + R +IGATNP  + PGTIRGDLA+ TGRN++HGSDS ++ ++EIALWF +G + +W     PW+ E
Sbjct:   83 EVEETYIMIKPDGVQRGLVGEIISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALWFGEGELCSWTPVQEPWLIE 232          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNY3 (Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC 6803) GN=ndk PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.899e-51
Identity = 92/149 (61.74%), Postives = 118/149 (79.19%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPIN-WQSSLHPWIYE 517
            ME+TFIMIKPDGVQR L+GEI+ RFEKKGF L  +K+MTV +  AEKHYE L+ KPFF  L+ +I S PVVAM+WEG  +V T R +IGAT+P  +APGTIRGD  +  GRNIIHGSD++E+A++EI+LWF D  +N W ++L+PW+YE
Sbjct:    1 MERTFIMIKPDGVQRQLIGEIVGRFEKKGFKLVAMKVMTVSQELAEKHYEALNDKPFFSGLVNFICSSPVVAMVWEGNSIVSTSRQMIGATDPHAAAPGTIRGDYGVSVGRNIIHGSDAIETAKREISLWFKDEEVNEWDATLNPWLYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.423e-51
Identity = 95/148 (64.19%), Postives = 115/148 (77.70%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            EQTFI IKPDGVQRGL+G II RFE +GF L  +KL++  +   E+HY DLS KPFF  L+ Y+ SGP+ AM+WEG  VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVE+A+KEIALWF P+  I+W+S+   W+YE
Sbjct:    4 EQTFIAIKPDGVQRGLIGPIISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFDWVYE 151          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.231e-50
Identity = 95/149 (63.76%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFFGSL+E+ITS PVVAM+WEG+GVV + R IIGATNP  S PGTIRGD  I  GRN+IHGSD+ E+A++EIALWF D   +NWQ  + PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTSEPGTIRGDFGINIGRNLIHGSDAPETAQQEIALWFKDEELVNWQPHITPWLHE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.607e-50
Identity = 95/149 (63.76%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            ME+TF+ +KPDGVQR LVGEII RFE KGF L GLKLM V +  AE+HY +   KPFF  L+++ITSGPVVAM+WEG+GVV + R IIGATNP  S PGTIRGD  +  GRNIIHGSD+VE+A++EIALWF P   ++W+ +L  WIYE
Sbjct:    1 MERTFLAVKPDGVQRALVGEIIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQREIALWFQPAELVSWEPTLTSWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_ANAVT (Nucleoside diphosphate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndk PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.099e-50
Identity = 93/149 (62.42%), Postives = 116/149 (77.85%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            ME+TF+ IKPDGVQRGLVGEII RFE KGF+L GLK + V +  AE+HY     +PFF SL+E+ITSGPVVAM+WEG+GV+ + R IIGATNP  + PGTIRGD  I  GRN+IHGSD+ E+A+KE++LWF D   +NWQ  L PW++E
Sbjct:    1 MERTFLAIKPDGVQRGLVGEIIRRFETKGFTLVGLKFLQVSKELAEQHYGVHRERPFFPSLVEFITSGPVVAMVWEGDGVIASARKIIGATNPLTAEPGTIRGDFGINIGRNLIHGSDAPETAQKEVSLWFTDAELVNWQPHLTPWLHE 149          
The following BLAST results are available for this feature:
BLAST of CK938692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SOLLC1.830e-6280.56Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]
NDK1_SACOF1.830e-6276.35Nucleoside diphosphate kinase 1 OS=Saccharum offic... [more]
NDK1_ORYSJ4.220e-5970.27Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK1_ORYSI4.220e-5970.27Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK2_TOBAC1.454e-5164.00Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK_SYNY31.899e-5161.74Nucleoside diphosphate kinase OS=Synechocystis sp.... [more]
NDK_ASPFU9.423e-5164.19Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]
NDK_NOSP71.231e-5063.76Nucleoside diphosphate kinase OS=Nostoc punctiform... [more]
NDK_CYAP41.607e-5063.76Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK_ANAVT2.099e-5062.42Nucleoside diphosphate kinase OS=Anabaena variabil... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_F04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938692 ID=CK938692; Name=CK938692; organism=Citrus sinensis; type=EST; length=753bp
GGGGCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTTAAAACAAGT
TGGTTTCTCTGAATCTCAAAGAAATGGAACAGACTTTCATCATGATCAAG
CCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGA
GAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCC
CTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGT
TCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGA
GGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACC
CTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGGGACG
GGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCGAGAAAGA
GATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTC
ACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTT
CCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGT
TACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAA
TCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATATACAATATT
TAAGCTTTTTTGTTGACTGTATTATGAATTGAGTTTGTTAATGGTTAGCA
CAT
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