CK938692

Overview
NameCK938692
Unique NameCK938692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:59..811. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNP6 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ndk PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIYE 517
            ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK +   R  AE+HY     +PFF  L+E+ITSGP+VA++ EGEGVV   R +IGATNP  + PGTIRGD  +  GRNIIHGSD++E+A++EIALWF    + +W  ++ PW+YE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNE7 (Nucleoside diphosphate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=ndk PE=3 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 88/149 (59.06%), Postives = 111/149 (74.50%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIYE 517
            ME+TFI IKPDGVQRGLVG II RFE+KGF L GLK +   R  AE+HY     +PFF  L+E+ITSGP+VA++ EGEGVV   R +IGATNP  + PGTIRGD  +  GRNIIHGSD++E+A++EIALWF    + +W  ++ PW+YE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIGRFEQKGFKLVGLKQLKPSRELAEQHYAVHRERPFFNGLVEFITSGPIVAIVLEGEGVVAAARKLIGATNPLTAEPGTIRGDFGVNIGRNIIHGSDAIETAQQEIALWFSPAELSDWTPTIQPWLYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_DESAP (Nucleoside diphosphate kinase OS=Desulforudis audaxviator (strain MP104C) GN=ndk PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 89/149 (59.73%), Postives = 112/149 (75.17%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            M++TF+M+KPDGVQRGLVGE+I RFE++GF L  LKL+ +DR  AE+HYE+   KPFF  L+ YITSGPV AM+ EG  VV T R ++GAT PA++ PGTIRG   I  GRNI+HGSDS  SA +EI L+F DG  I ++ +L PWIYE
Sbjct:    1 MDRTFVMVKPDGVQRGLVGEVITRFERRGFKLVALKLLWIDRGLAERHYEEHRGKPFFDELVRYITSGPVAAMVLEGREVVTTVREMMGATQPAKALPGTIRGTYGIDVGRNIVHGSDSAASAAREIGLFFADGELIEYERALDPWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_ARCFU (Nucleoside diphosphate kinase OS=Archaeoglobus fulgidus GN=ndk PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.402e-46
Identity = 84/149 (56.38%), Postives = 114/149 (76.51%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIYE 517
            ME+TF+M+KPDGVQRGLVGE+I R E+KG  +  +K++ + R  AE HY +   KPFF +L++YITSGPVVAM+ EG+  +K  RT++GATNPA++APGTIRGD  +  GRN++H SDS +SAE+EI+L+F D  I NW+ +   WIYE
Sbjct:    1 MERTFVMVKPDGVQRGLVGEVIGRLERKGLKIVAMKMLWIAREMAENHYAEHREKPFFSALVDYITSGPVVAMVVEGKNAIKVVRTLVGATNPAEAAPGTIRGDFGLDVGRNVVHASDSPQSAEREISLFFSDDEIVNWEKADEDWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDKA1_XENLA (Nucleoside diphosphate kinase A1 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.402e-46
Identity = 89/148 (60.14%), Postives = 109/148 (73.65%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            E+TFI IKPDGVQRGL+G+II RFE+KGF L  +K     +    +HY DL  +PF+  L+EY++SGPV+AM+WEG  VVKTGR ++G TNPA S PGTIRGD  I  GRNIIHGSDSVESA KEIALWF D   +  +S  + W+YE
Sbjct:    6 ERTFIAIKPDGVQRGLMGDIIKRFEQKGFRLVAMKFQQASQDLLRQHYIDLKDRPFYPGLVEYMSSGPVLAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESANKEIALWFKDEELVENKSCAYEWVYE 153          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_MACCJ (Nucleoside diphosphate kinase OS=Macrococcus caseolyticus (strain JCSC5402) GN=ndk PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.137e-46
Identity = 89/148 (60.14%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIY 514
            ME+TF+MIKPDGV RGL+GEI+ R E KG  + G KLMTV    A+ HY + S KPFFG L+E+ITSGPV AM+ EG+ VV+ GRT++G TNPA+SAPGTIRGD  +  G+NIIHGSDSV SA+KEIALWF +  I ++      W+Y
Sbjct:    1 MEKTFLMIKPDGVGRGLIGEIVKRIENKGIKVVGAKLMTVSEDLAKTHYGEHSEKPFFGELVEFITSGPVFAMVLEGDNVVEIGRTLVGKTNPAESAPGTIRGDFGMTVGKNIIHGSDSVASADKEIALWFKEEEILSYDLVTSAWVY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNJB (Nucleoside diphosphate kinase OS=Synechococcus sp. GN=ndk PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46
Identity = 86/149 (57.72%), Postives = 110/149 (73.83%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            ME+TFI IKPDGVQRGLVG II R E +G+ L GLKL+ V +  AE HY +   +PFF SL+++ITSGPVVAM+W+G+GV+   R +IG TNP ++ PGTIRGD  I  GRN+IHGSD VE+A++EIALWF +   ++W      WIYE
Sbjct:    1 MERTFIAIKPDGVQRGLVGTIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHKERPFFHSLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLEAEPGTIRGDFGIDIGRNLIHGSDGVETAQREIALWFDESELVSWTPVAQSWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BREBN (Nucleoside diphosphate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=ndk PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.988e-46
Identity = 84/147 (57.14%), Postives = 110/147 (74.83%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWI 511
            ME+TF+M+KPDGVQR L+GEI+ RFEKKG+ L G KLMTV R  AE+HY +   +PFFG L+++ITSGPV AM+W+G  V+ T R ++G TNP  +A GTIRGD A   G NIIHGSDS ESAE+EI LWF  +  ++++ ++  WI
Sbjct:    1 MEKTFLMVKPDGVQRNLIGEIVSRFEKKGYQLVGAKLMTVSRELAEEHYAEHKERPFFGELVDFITSGPVFAMVWQGNNVITTARAMMGKTNPVDAASGTIRGDFATSVGMNIIHGSDSPESAEREIGLWFSAEEVLSFEKTIQRWI 147          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNS9 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9902) GN=ndk PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 88/148 (59.46%), Postives = 108/148 (72.97%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPIN-WQSSLHPWIYE 517
            E+TF+ IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P +S PGTIRGDLA+  GRN+IHGSD+ E+AE EI LWF    +N W  S   W  E
Sbjct:    3 ERTFVAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEEHYGVHKERPFFAGLVGFITSGPVVAMVWEGDGVIASARKLIGATKPLESEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFQPSELNDWSPSDQAWRVE 150          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNS3 (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9311) GN=ndk PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 89/148 (60.14%), Postives = 110/148 (74.32%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            E++FI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFFG L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLAI  GRN+IHGSD+ E+AE EI LWF P    +W  S   W  E
Sbjct:    4 ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVE 151          
The following BLAST results are available for this feature:
BLAST of CK938692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SYNP61.408e-4659.06Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNE71.408e-4659.06Nucleoside diphosphate kinase OS=Synechococcus elo... [more]
NDK_DESAP1.408e-4659.73Nucleoside diphosphate kinase OS=Desulforudis auda... [more]
NDK_ARCFU2.402e-4656.38Nucleoside diphosphate kinase OS=Archaeoglobus ful... [more]
NDKA1_XENLA2.402e-4660.14Nucleoside diphosphate kinase A1 OS=Xenopus laevis... [more]
NDK_MACCJ3.137e-4660.14Nucleoside diphosphate kinase OS=Macrococcus caseo... [more]
NDK_SYNJB4.097e-4657.72Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_BREBN6.988e-4657.14Nucleoside diphosphate kinase OS=Brevibacillus bre... [more]
NDK_SYNS91.557e-4559.46Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNS31.557e-4560.14Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_F04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938692 ID=CK938692; Name=CK938692; organism=Citrus sinensis; type=EST; length=753bp
GGGGCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTTAAAACAAGT
TGGTTTCTCTGAATCTCAAAGAAATGGAACAGACTTTCATCATGATCAAG
CCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGA
GAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCC
CTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGT
TCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGA
GGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACC
CTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGGGACG
GGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCGAGAAAGA
GATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTC
ACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTT
CCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGT
TACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAA
TCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATATACAATATT
TAAGCTTTTTTGTTGACTGTATTATGAATTGAGTTTGTTAATGGTTAGCA
CAT
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