CK938692

Overview
NameCK938692
Unique NameCK938692
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNPX (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain WH8102) GN=ndk PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPIN-WQSSLHPWIYE 517
            E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD+ E+AE EI LWF    +N W  S   W  E
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAPETAEFEIGLWFDAAELNDWTPSDQTWRVE 150          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNJA (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ndk PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 84/149 (56.38%), Postives = 108/149 (72.48%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIYE 517
            ME+TFI IKPDGVQRGLVG II R E +G+ L GLKL+ V +  AE HY +   +PFF  L+++ITSGPVVAM+W+G+GV+   R +IG TNP  + PGTIRGD  I  GRN++HGSD  E+A++EIALWF +   +NW  +   WIYE
Sbjct:    1 MERTFIAIKPDGVQRGLVGSIIQRLESRGYQLVGLKLVQVSQELAEAHYAEHRERPFFPGLVKFITSGPVVAMVWQGKGVIAAARKLIGKTNPLDAEPGTIRGDFGIDIGRNLVHGSDGPETAQREIALWFQESELVNWTPATQSWIYE 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK3_HUMAN (Nucleoside diphosphate kinase 3 OS=Homo sapiens GN=NME3 PE=1 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.557e-45
Identity = 85/148 (57.43%), Postives = 109/148 (73.65%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            E+TF+ +KPDGVQR LVGEI+ RFE+KGF L  LKL+        +HY +L  +PF+G L++Y+ SGPVVAM+W+G  VV+T R +IGATNPA + PGTIRGD  I  G+N+IHGSDSVESA +EIALWF  D  + W+ S   W+YE
Sbjct:   22 ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADELLCWEDSAGHWLYE 169          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_SYNSC (Nucleoside diphosphate kinase OS=Synechococcus sp. (strain CC9605) GN=ndk PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.033e-45
Identity = 87/148 (58.78%), Postives = 109/148 (73.65%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPIN-WQSSLHPWIYE 517
            E+TFI IKPDGVQRGLVGEI+ RFE+KGF L GLK +T  R  AE+HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD+ E+A+ EI LWF    +N W  S   W  E
Sbjct:    3 ERTFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQITPSRALAEQHYGVHKERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDAAETAQFEIGLWFQASELNDWSPSDQGWRVE 150          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_GEOKA (Nucleoside diphosphate kinase OS=Geobacillus kaustophilus GN=ndk PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.033e-45
Identity = 81/147 (55.10%), Postives = 112/147 (76.19%), Query Frame = 2
Query:   77 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            E+TFIM+KPDGVQR L+GEI+ RFEKKGF L G KLM V R  AE+HY +   +PFFG L+++ITSGPV AM+WEGE V+   R ++G TNP ++APGTIRGD  +  G+N+IHGSDS +SA++EI+L+F +   +++   ++ W+Y
Sbjct:    3 ERTFIMVKPDGVQRNLIGEIVARFEKKGFQLVGAKLMQVSRELAEQHYAEHKERPFFGELVDFITSGPVFAMVWEGENVIAAARQMMGKTNPQEAAPGTIRGDFGLTVGKNVIHGSDSPQSAKREISLFFKEEELVSYSKQINAWLY 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACC1 (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 10987) GN=ndk PE=3 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45
Identity = 83/148 (56.08%), Postives = 112/148 (75.68%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY + + KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESAE+EIA++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHTEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIAIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACCR (Nucleoside diphosphate kinase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=ndk PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45
Identity = 83/148 (56.08%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TF+M+KPDGVQR  +GEI+ RFEKKGF L G KLM V    A +HY +   KPFFG L+++ITSGPV AM+W+GEGVV T R ++G T P ++APGTIRGD  +   +NIIHGSDS+ESAE+EIA++F +   +++   ++ WIY
Sbjct:    1 MEKTFLMVKPDGVQRAFIGEIVARFEKKGFQLVGAKLMQVTPEIAGQHYAEHKEKPFFGELVDFITSGPVFAMVWQGEGVVDTARNMMGKTRPHEAAPGTIRGDFGVTVAKNIIHGSDSLESAEREIAIFFKEEELVDYSKLMNEWIY 148          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_BACSU (Nucleoside diphosphate kinase OS=Bacillus subtilis GN=ndk PE=1 SV=3)

HSP 1 Score: 181.03 bits (458), Expect = 5.916e-45
Identity = 85/148 (57.43%), Postives = 111/148 (75.00%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGP-INWQSSLHPWIY 514
            ME+TFIM+KPDGVQR L+G+I+ RFE+KG  L G KLM V    AEKHY +   KPFFG L+E+ITSGPV AM+WEGE V++  R +IG TNP ++ PGTIRGD  +  G+NIIHGSDS+ESAE+EI ++F +   +++Q  +  WIY
Sbjct:    2 MEKTFIMVKPDGVQRQLIGDILSRFERKGLQLAGAKLMRVTEQMAEKHYAEHQGKPFFGELVEFITSGPVFAMVWEGENVIEVTRQLIGKTNPKEALPGTIRGDYGMFVGKNIIHGSDSLESAEREINIFFKNEELVSYQQLMAGWIY 149          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_YEAST (Nucleoside diphosphate kinase OS=Saccharomyces cerevisiae GN=YNK1 PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45
Identity = 83/150 (55.33%), Postives = 111/150 (74.00%), Query Frame = 2
Query:   71 EMEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWF-PDGPINWQSSLHPWIYE 517
            + E+TFI +KPDGVQRGLV +I+ RFEKKG+ L  +KL+  D    E+HY +   KPFF  ++ ++ SGP++A +WEG+ VV+ GRTI+GATNP  SAPGTIRGD  I  GRN+ HGSDSV+SAE+EI LWF  +  ++W+S+   WIYE
Sbjct:    4 QTERTFIAVKPDGVQRGLVSQILSRFEKKGYKLVAIKLVKADDKLLEQHYAEHVGKPFFPKMVSFMKSGPILATVWEGKDVVRQGRTILGATNPLGSAPGTIRGDFGIDLGRNVCHGSDSVDSAEREINLWFKKEELVDWESNQAKWIYE 153          
BLAST of CK938692 vs. ExPASy Swiss-Prot
Match: NDK_OCEIH (Nucleoside diphosphate kinase OS=Oceanobacillus iheyensis GN=ndk PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.009e-44
Identity = 83/148 (56.08%), Postives = 108/148 (72.97%), Query Frame = 2
Query:   74 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIGTGRNIIHGSDSVESAEKEIALWFPDGPI-NWQSSLHPWIY 514
            ME+TF+M+KPDGVQR L+GEI+ RFE KG+ L G KLM V    AE HY +   +PFFG L+++ITSGPV AM+WEGE V+ T R ++G TNP ++ P TIRGD  I  G+NIIHGSDS ESAE+EI L+F +  I +++   + WIY
Sbjct:    1 MEKTFLMVKPDGVQRELIGEIVKRFETKGYKLAGAKLMQVSNQLAETHYSEHKERPFFGELVDFITSGPVFAMVWEGENVIATARKMMGKTNPLEADPSTIRGDFGISVGKNIIHGSDSAESAEREITLFFTENEIVSYEKQANNWIY 148          
The following BLAST results are available for this feature:
BLAST of CK938692 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_SYNPX1.557e-4559.46Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_SYNJA1.557e-4556.38Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK3_HUMAN1.557e-4557.43Nucleoside diphosphate kinase 3 OS=Homo sapiens GN... [more]
NDK_SYNSC2.033e-4558.78Nucleoside diphosphate kinase OS=Synechococcus sp.... [more]
NDK_GEOKA2.033e-4555.10Nucleoside diphosphate kinase OS=Geobacillus kaust... [more]
NDK_BACC13.468e-4556.08Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACCR4.529e-4556.08Nucleoside diphosphate kinase OS=Bacillus cereus (... [more]
NDK_BACSU5.916e-4557.43Nucleoside diphosphate kinase OS=Bacillus subtilis... [more]
NDK_YEAST7.726e-4555.33Nucleoside diphosphate kinase OS=Saccharomyces cer... [more]
NDK_OCEIH1.009e-4456.08Nucleoside diphosphate kinase OS=Oceanobacillus ih... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004439_F04 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650002_IVF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938692 ID=CK938692; Name=CK938692; organism=Citrus sinensis; type=EST; length=753bp
GGGGCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTTAAAACAAGT
TGGTTTCTCTGAATCTCAAAGAAATGGAACAGACTTTCATCATGATCAAG
CCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATTTGA
GAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACCGCC
CTTTTGCTGAGAAGCACTATGAGGATTTGTCATCGAAGCCTTTCTTTGGT
TCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTGGGA
GGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCAACC
CTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGGGACG
GGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCGAGAAAGA
GATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCCTTC
ACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATTGTT
CCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTATGGT
TACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATTGAGACCAA
TCCTGGTTATGTTGGCTGCTTTTATTCTTGTGGTTGCCATATACAATATT
TAAGCTTTTTTGTTGACTGTATTATGAATTGAGTTTGTTAATGGTTAGCA
CAT
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