CN187815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTT2_HUMAN (Actin-related protein T2 OS=Homo sapiens GN=ACTRT2 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.861e-26 Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 +G ++ G+ +SI KCD DI+K L+G IVLSGG+T+F G+ DR+ KE+ LA IK+ APP+R +S WIG SI+ SLS+F+QMW++ ++ E G S+V R+CF Sbjct: 269 LGSQSPGLSNMVSSSITKCDTDIQKILFGEIVLSGGTTLFHGLDDRLLKELEQLASKDTPIKITAPPDRWFSTWIGASIVTSLSSFKQMWVTAADFKEFGTSVVQRRCF 377
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTT2_BOVIN (Actin-related protein T2 OS=Bos taurus GN=ACTRT2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.861e-26 Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 +G++ G+ + SI KCD DI+K LYG IVLSGG+T+F G+ DR+ +E+ LA IK+ APP+R +S WIG SI+ SLS+F+QMW++ ++ E G S++ R+CF Sbjct: 269 LGIQNPGLSKMVSCSITKCDADIQKTLYGEIVLSGGTTLFQGLDDRLLRELEQLASKGTPIKITAPPDRWFSTWIGASIVTSLSSFKQMWVTSADFKEFGTSVIQRRCF 377
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.145e-26 Identity = 53/109 (48.62%), Postives = 76/109 (69.72%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 +G+ GI + NSIM CD DI+++L+ IVLSGG+TMFPG+ DR+ KE+ LA IK+ A +R YS WIGGS++ S++TF+QMW++ ++ E G +V RKCF Sbjct: 268 LGIHDLGISKMVCNSIMNCDTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDLAFEGTPIKITASSDRCYSAWIGGSVMTSMTTFKQMWVTAEDFKEYGAFVVQRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.145e-26 Identity = 50/109 (45.87%), Postives = 77/109 (70.64%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 +G+ + G+ + +SIMKCD DI+ LY +IVLSGG+T+ PG+ +R+ KE+ LA IK+ A P+R +S WIG SI+ S+S+F+QMW++ ++ E G S+V R+CF Sbjct: 268 LGIHSPGLSKMVSSSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6B_RAT (Actin-like protein 6B OS=Rattus norvegicus GN=Actl6b PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E++ P SM++K++A ERK+S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 316 GNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6B_MOUSE (Actin-like protein 6B OS=Mus musculus GN=Actl6b PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E++ P SM++K++A ERK+S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 316 GNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6B_HUMAN (Actin-like protein 6B OS=Homo sapiens GN=ACTL6B PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E++ P SM++K++A ERK+S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 316 GNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6B_BOVIN (Actin-like protein 6B OS=Bos taurus GN=ACTL6B PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.234e-26 Identity = 55/110 (50.00%), Postives = 75/110 (68.18%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ SI CD+DIR LYG+++++GG+T+ G DR+++E++ P SM++K++A ERK+S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 316 GNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 425
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6A_MOUSE (Actin-like protein 6A OS=Mus musculus GN=Actl6a PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ S+ CD+DIR LYG+++++GG+T+ DR+++E++ P SM++K++A ER++S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 319 GNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACL6A_MACFA (Actin-like protein 6A OS=Macaca fascicularis GN=ACTL6A PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.021e-24 Identity = 52/110 (47.27%), Postives = 74/110 (67.27%), Query Frame = -3 Query: 495 GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVA---PPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKC 815 G G+ S+ CD+DIR LYG+++++GG+T+ DR+++E++ P SM++K++A ER++S WIGGSILASL TFQQMWISK EY+E G V RKC Sbjct: 319 GNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRLNRELSQKTPPSMRLKLIANNTTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKC 428 The following BLAST results are available for this feature:
BLAST of CN187815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187815 ID=CN187815; Name=CN187815; organism=Citrus sinensis; type=EST; length=820bpback to top |