CN187815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACT_CRAGI (Actin OS=Crassostrea gigas PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 +GME++GIHET+YNSIMKCDVDIRKDLY NIVLSGG+TMFPGIADRM KE+TALAP +MKIKV+APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF Sbjct: 268 LGMESSGIHETSYNSIMKCDVDIRKDLYANIVLSGGTTMFPGIADRMQKEVTALAPPTMKIKVIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTSB_TAKRU (Actin, alpha skeletal muscle B OS=Takifugu rubripes GN=acta1b PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 269 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTN_STYCL (Actin, muscle OS=Styela clava GN=TB12 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 270 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 378
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTM_STYCL (Actin, muscle OS=Styela clava PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 270 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 378
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTH_RAT (Actin, gamma-enteric smooth muscle OS=Rattus norvegicus GN=Actg2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 268 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTH_MOUSE (Actin, gamma-enteric smooth muscle OS=Mus musculus GN=Actg2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 268 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTH_HUMAN (Actin, gamma-enteric smooth muscle OS=Homo sapiens GN=ACTG2 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 268 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTH_CHICK (Actin, gamma-enteric smooth muscle OS=Gallus gallus GN=ACTG2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 268 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTH_BOVIN (Actin, gamma-enteric smooth muscle OS=Bos taurus GN=ACTG2 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 268 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKPEYDEAGPSIVHRKCF 376
BLAST of CN187815 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.974e-52 Identity = 97/109 (88.99%), Postives = 105/109 (96.33%), Query Frame = -3 Query: 492 IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 818 IGME+AGIHETTYNSIMKCD+DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDE+GPSIVHRKCF Sbjct: 269 IGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377 The following BLAST results are available for this feature:
BLAST of CN187815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 455
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Sequences
The
following sequences are available for this feature:
EST sequence >CN187815 ID=CN187815; Name=CN187815; organism=Citrus sinensis; type=EST; length=820bpback to top |