CN187806

Overview
NameCN187806
Unique NameCN187806
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.490e-11
Identity = 30/82 (36.59%), Postives = 53/82 (64.63%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY ALP+ GKVI+ + ++P + +T + ++ V  +D+ M    PG KERT +E +ALA  +GF  +++ C  ++ +++E  K
Sbjct:  282 NCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALP  GKVI+ + ++PE  ++ + ++ V  +D+      PG KERT +E +ALA  AGF   ++ C  ++ +++E  K
Sbjct:  258 NCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 35/82 (42.68%), Postives = 47/82 (57.32%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALPE GKV+VV+ ++PES +     + V+ +D+ M    PG KER   E + LA  AGFT  K      + W +E  K
Sbjct:  287 NCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.946e-11
Identity = 31/82 (37.80%), Postives = 51/82 (62.20%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALP  GKVI+ + ++PE  ++ + ++ V  +D+      PG KERT +E +ALA  AGF   ++ C  ++ +++E  K
Sbjct:  258 NCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.541e-11
Identity = 34/82 (41.46%), Postives = 50/82 (60.98%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY ALPE GKVIV + ++P S +  + ++ V  +D  M    PG KERT +E +ALA  AGF   K+ C  ++ +++E  K
Sbjct:  287 NCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.319e-11
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCYDALPE GKVI+V+ ++P + +T + ++ V  +D  M    PG KERT +E + LA  AGF   +++C  ++  ++E  K
Sbjct:  281 NCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.335e-11
Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY+ALP+ GKVIV + ++P + ++ + ++ V  +D+ M    PG KERT +E + LA  AGF   K+ C  ++ +++E  K
Sbjct:  282 NCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CN187806 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.394e-11
Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = -1
Query:  214 NCYDALPEFGKVIVVDSLIPESLETDILSRLVYLLDIQMYTIFPGAKERTVEELKALATKAGFTAVKLVCRGYSCWLVELYK 459
            NCY+ALP  GKVI+V+ ++PE+ +T   ++     DI M    PG KERT ++ +ALA    F+  + VC  Y  W++E  K
Sbjct:  278 NCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
The following BLAST results are available for this feature:
BLAST of CN187806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
COMT1_ROSCH1.490e-1136.59Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
OMT2_CHRAE1.946e-1137.80Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_ORYSJ1.946e-1142.68Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
OMT1_CHRAE1.946e-1137.80Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_CLABR2.541e-1141.46Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT3_POPKI3.319e-1140.24Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_MEDSA4.335e-1137.80Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPCH7.394e-1140.24Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005A14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN187806 ID=CN187806; Name=CN187806; organism=Citrus sinensis; type=EST; length=459bp
AATAGGAGTTGAAGGTAGCCAAACAGCCAGGATTATCCAACCTACGATTT
TATTAAGTTACTTTTGCACGCAAGCATTAAGAAGAGTCACTGAAACATGA
CAAGAAATAGAAGCCGATGCTGGCAAAATAATTAGGACTGGCGTCGGCAT
TTTATTTTATTTAATTAAATTAGAACCTTTAAATGACCTGTACGCTTGTC
AAAGCTCGGATCATTTGTAGAGTTCAACAAGCCAACAGCTGTAACCACGA
CAGACAAGTTTAACAGCTGTAAATCCAGCTTTTGTCGCCAGAGCCTTCAA
CTCCTCTACTGTCCTCTCCTTTGCCCCAGGAAATATAGTGTACATTTGTA
TGTCAAGCAGATAAACAAGCCTGCTTAAAATATCAGTCTCAAGGGACTCT
GGTATTAAAGAGTCTACCACAATGACCTTCCCGAATTCTGGAAGAGCATC
GTAGCAATT
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