CK938637
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR81_ARATH (Pentatricopeptide repeat-containing protein At1g55630 OS=Arabidopsis thaliana GN=At1g55630 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 53/181 (29.28%), Postives = 80/181 (44.20%), Query Frame = 2 Query: 14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 550 K+G + Y+ +L+ L AL L M ++ P + + I G G +E K D+ ++ G P+VV Y +I Y + +A E+ KEMT G LP T+N+++ G C G A L++E RG P YS L+ L G A ++ MV KG Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME---SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP401_ARATH (Pentatricopeptide repeat-containing protein At5g28460 OS=Arabidopsis thaliana GN=At5g28460 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.965e-11 Identity = 58/187 (31.02%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 50 SVLYGLYREXXQDEAL-EHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 598 ++L GL+ + E + E L MEK P ++ + I F D E +R +QM E+G P V Y +I AYC + EA +L K+M H + P +N +++ + GN G AL L EE + R P Y+ L K L EK ++ L+ +MV + P+ +T L+ LS Sbjct: 550 NMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR---PNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR67_ARATH (Putative pentatricopeptide repeat-containing protein At1g31840 OS=Arabidopsis thaliana GN=At1g31840 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 49/165 (29.70%), Postives = 83/165 (50.30%), Query Frame = 2 Query: 119 KLFPRAVDRSLK----ILGFCVD-----GDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 KLF +A+ + +K + +D GD+ A + +M+ +G PNVV Y LI CQ+ R+ EA + ++ G P T+++++ G C+ GN+ + L EDM I G P Y L+ L ++G A V+M+G+ I + + +NSL+ Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY-EDM--IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP293_ARATH (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 45/192 (23.44%), Postives = 90/192 (46.88%), Query Frame = 2 Query: 17 EGSKGRISPYDSVLYGLYREXXQDEALE--HLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 +G K I ++ +L GL R + +A++ H+ + + P ++ I FC +E A FD M++ G P+ +Y CLI + ++++ EL+KEM G+ P T+N ++ + Q A ++ + I P ++ ++K+ ++ + +M+ KGI PD ++ L+ Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN---KMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLI 515
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP171_ARATH (Pentatricopeptide repeat-containing protein At2g26790, mitochondrial OS=Arabidopsis thaliana GN=At2g26790 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 55/202 (27.23%), Postives = 95/202 (47.03%), Query Frame = 2 Query: 32 RISPYDSVLYGLYREXXQDEALEHLKQMEKLFPRAVDRSL--KILG-FCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCR-----------QGNVG---TALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 R S Y + + L E ++A + LK+M + RS+ K++G FC +V +A+ FD M+E G +P++ Y +IH YC+ +++A L ++M G P T+ +L + QG VG + L E GIG + Y+ LI C+ + A+ L +M+ G+ PD + + +L+ Sbjct: 555 RKSVYIKLFFSLCIEGYLEKAHDVLKKMSA-YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVV----CYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLI 751
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP113_ARATH (Pentatricopeptide repeat-containing protein At1g71210 OS=Arabidopsis thaliana GN=At1g71210 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.790e-11 Identity = 50/192 (26.04%), Postives = 86/192 (44.79%), Query Frame = 2 Query: 17 EGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 EG + + Y+S+++ L +E D + L +M + P + + FC G V++A + E G P + Y+ LIH C E V +A +++K G+ TF+T+ + LC +G A +LV + R LP +I ALC+ G + A M+ G+ + + SL+ Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELV---IAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLI 539 The following BLAST results are available for this feature:
BLAST of CK938637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938637 ID=CK938637; Name=CK938637; organism=Citrus sinensis; type=EST; length=928bpback to top |