CK938637 | Citrus Genome Database

Overview


Name	CK938637
Unique Name	CK938637
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	928

Libraries


Library Name	Type
Developing fruit albedo at 165 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP389_ARATH (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.158e-16
Identity = 51/183 (27.87%), Postives = 92/183 (50.27%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            +++++    +E    EA E  ++M    L P  V  SL I G C+   +++A+  F  M+ +G  P+VV Y  LI+ YC+ ++V    +L  EM+  G +    T+  ++ G CR G +  A ++     R +  G  P    Y+ L+  LC+ G  + A ++L  M   G+  D +T+N ++
Sbjct:  259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFR---RMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

HSP 2 Score: 83.9593 bits (206), Expect = 1.372e-15
Identity = 55/189 (29.10%), Postives = 90/189 (47.62%), Query Frame = 2

Query:   35 ISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 595
            I  Y  ++YGL      DEA E    M  +  FP  V  S+ I G+C    VE   + F +M + G V N V Y  LI  YC+  ++  A E+ + M   G  P   T+N +L GLC  G +  AL ++ +  +    G       Y+ +I+ +C+ G    A  +   +  +G++PD  T+ ++++ L
Sbjct:  291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQK---NGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGL 476

HSP 3 Score: 79.337 bits (194), Expect = 3.379e-14
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 2

Query:  164 FCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            FC    +  A     +MI+ G  P++V +  L++ +C+ +RV +A  +  +M G GY P    +NT++ GLC+   V  AL L+   +  GIG    P    Y+ LI  LC  G +  A+ ++  M  + I PD  T+N+L+
Sbjct:  126 FCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG----PDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALI 263

HSP 4 Score: 78.9518 bits (193), Expect = 4.413e-14
Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = 2

Query:   92 ALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            AL  L +M KL   P  V     + GFC    V DA   FDQM+  G  PNVVIY+ +I   C+ ++V  A +L+  M   G  P   T+N+++SGLC  G    A ++V    +   R   P    ++ LI A  ++G    A     +M+ + + PD +T++ L+
Sbjct:  135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK---REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298

HSP 5 Score: 77.0258 bits (188), Expect = 1.677e-13
Identity = 56/193 (29.02%), Postives = 90/193 (46.63%), Query Frame = 2

Query:   20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRG--IGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            G K  +  Y++++ GL +    D AL+ L +MEK  + P  V  +  I G C  G   DA R    M +    P+V  ++ LI A  +E RV EA E  +EM      P   T++ ++ GLC    +  A     E+M G  + +G  P    YS LI   C+    +    L  +M  +G++ + +T+  L+
Sbjct:  181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEA-----EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP100_ARATH (Pentatricopeptide repeat-containing protein At1g63150 OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.043e-16
Identity = 56/177 (31.64%), Postives = 89/177 (50.28%), Query Frame = 2

Query:   92 ALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWS 616
            AL  L +M KL   P  V  S  + G+C    + DA    DQM+E G  P+   +  LIH      +  EA  L+ +M   G  P   T+ TV++GLC++G++  AL L+ +      + ++     ++ +I +LC+    + A  L  +M  KGI P+ +T+NSL+ CL     WS
Sbjct:  137 ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVV---IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWS 310

HSP 2 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 52/196 (26.53%), Postives = 97/196 (49.49%), Query Frame = 2

Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E   +G +  +  Y+S++  L       +A   L  M  +K+ P  V  +  I  F  +G + +A++  ++MI+    P+ + Y+ LI+ +C   R+ EA ++ K M     LP   T+NT+++G C+   V   ++L  E  +   RG +  +  Y+ +I+   + G   SA M+  QMV   +  D +T++ LL
Sbjct:  283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ---RGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILL 475

HSP 3 Score: 68.5514 bits (166), Expect = 5.965e-11
Identity = 50/191 (26.18%), Postives = 89/191 (46.60%), Query Frame = 2

Query:   20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            G K     + ++++GL+      EA+  + QM +    P  V     + G C  GD++ A    ++M       NVVI++ +I + C+   V  A +L  EM   G  P   T+N++++ LC  G    A +L+   +    +   P    ++ LI A  ++G    A  L  +M+ + I PD +T+N L+
Sbjct:  183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE---KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLI 370

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 2

Query:  122 LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            L P  +  +  I GFC  GDVE A     +M + G   + V +  L+   C+E RV +A   ++EM   G  P   T+  ++   C++G+  T  KL++E       G +P    Y+ L+  LC+ G  ++A MLL  M+  G++PD +T+N+LL
Sbjct:  411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ---SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562

HSP 2 Score: 80.1073 bits (196), Expect = 1.981e-14
Identity = 54/194 (27.84%), Postives = 100/194 (51.55%), Query Frame = 2

Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            K  ++  +  Y +++  L +E   D A     +M K  L P  V  +  I G   +G+++  K  + +M+ +G  P++V+Y+ L++ +C+   +  A  ++  M   G  P   T+ T++ G CR G+V TAL++ +E D  GI    L   G +S L+  +C++G    A   L +M+  GI PD +T+  ++
Sbjct:  303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI---ELDRVG-FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492

HSP 3 Score: 74.3294 bits (181), Expect = 1.087e-12
Identity = 51/196 (26.02%), Postives = 92/196 (46.94%), Query Frame = 2

Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E +K   +  +  +++++ G  +    DE      QMEK    P     S  I   C +  ++ A   FD+M + G +PN VI+  LIH + +   +    E  ++M   G  P    +NT+++G C+ G++  A  +V+  +R   RG  P    Y+ LI   C  G  ++A  +  +M   GI  D + +++L+
Sbjct:  265 EITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIR---RGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP218_ARATH (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.792e-15
Identity = 52/159 (32.70%), Postives = 81/159 (50.94%), Query Frame = 2

Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 604
            P     ++ I G C DG +E+A     +M+++   P+V+ Y+ LI+ YC++ RV  A EL+  M      P   TFN ++ GLCR G    A+ L++   R +  G  P    Y+ LI  LC +G   +A  LL  M    I PD LT+ +++    +Q
Sbjct:  334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLK---RMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489

HSP 2 Score: 81.2629 bits (199), Expect = 8.892e-15
Identity = 56/195 (28.72%), Postives = 96/195 (49.23%), Query Frame = 2

Query:   20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE----DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            G K  +  Y  ++ GL R+   +EA    ++M  +++FP  +  +  I G+C DG V  A      M +    PNV  ++ L+   C+  +  +A  L+K M  +G  P   ++N ++ GLCR+G++ TA KL+      D+        P    ++ +I A C++G    AS  L  M+ KGI  D +T  +L+
Sbjct:  331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIE-------PDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518

HSP 3 Score: 73.9442 bits (180), Expect = 1.420e-12
Identity = 57/186 (30.65%), Postives = 82/186 (44.09%), Query Frame = 2

Query:   50 SVLYGLYREXXQDEALEHLKQMEK---LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNV----GTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            S+L G  R     +AL+    M K     P +V  S+ I G C  G +E+A    DQM E+G  P+   Y  LI A C    + +A  L  EM   G  P   T+  ++ GLCR G +    G   K+V++ +        P    Y+ LI   C+ G    A  LL  M  +   P+  T+N L+
Sbjct:  235 SLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI-------FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELM 413

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR95_ARATH (Pentatricopeptide repeat-containing protein At1g62915, mitochondrial OS=Arabidopsis thaliana GN=At1g62915 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 56/177 (31.64%), Postives = 85/177 (48.02%), Query Frame = 2

Query:   92 ALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWS 616
            AL  L +M KL   P  V  +  + GFC    + DA    DQM+E G  P+ V +  LIH      +  EA  L+  M   G  P   T+  V++GLC++G+   AL L+ +        ++     YS +I +LC+      A  L  +M  KG+ P+ +T++SL+ CL     WS
Sbjct:  132 ALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWS 305

HSP 2 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 55/196 (28.06%), Postives = 95/196 (48.47%), Query Frame = 2

Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E   +G +  +  Y S++  L       +A   L  M   K+ P  V  S  I  F   G +  A++ +++MI+    PN+  Y  LI+ +C  +R+ EA ++++ M     LP   T+NT+++G C+   V   ++L  E  +   RG +  +  Y+ LI    +     +A M+  QMV  G+ P+ LT+N LL
Sbjct:  278 EMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQ---RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 470

HSP 3 Score: 78.1814 bits (191), Expect = 7.528e-14
Identity = 58/193 (30.05%), Postives = 88/193 (45.60%), Query Frame = 2

Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQME--KLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            + G +  +  Y +V+ GL +    D AL  L +ME  K+    V  S  I   C     +DA   F +M  +G  PNV+ Y  LI   C   R  +AS L+ +M      P   TF+ ++    ++G +  A KL EE ++   R   P    YS LI   C       A  +L  M+ K  LP+ +T+N+L+
Sbjct:  211 QRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIK---RSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLI 400

HSP 4 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 49/186 (26.34%), Postives = 92/186 (49.46%), Query Frame = 2

Query:  104 LKQMEKLFPRAVDRSLK---------ILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWSVNMSHF 634
            L + EKL+   + RS+          I GFC+   + +AK+  + MI +  +PNVV Y+ LI+ +C+ +RV +  EL +EM+  G +    T+ T++ G  +  +   A ++V + M  +G    P    Y+ L+  LC+ G    A ++   +    + PD  T+N ++  + +   W +   +F
Sbjct:  339 LVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA-QMVFKQMVSVGVH--PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR50_ARATH (Putative pentatricopeptide repeat-containing protein At1g19290 OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 57/198 (28.79%), Postives = 96/198 (48.48%), Query Frame = 2

Query:   11 SKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKLFPRAVDRSLKIL---GFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 595
            S+ G    +  Y S++ G  ++   +EA EH+ ++ K      D+ +  +   G+C  G + DA R  D MIE G   N  I + LI+ YC+  ++ EA ++   M      P   T+NT++ G CR G V  ALKL ++  +   +  +P    Y+ L+K     G F     L   M+ +G+  D ++ ++LL  L
Sbjct:  288 SERGVSRNVVTYTSLIKGYCKKGLMEEA-EHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ---KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEAL 481

HSP 2 Score: 73.1738 bits (178), Expect = 2.422e-12
Identity = 46/157 (29.30%), Postives = 79/157 (50.32%), Query Frame = 2

Query:   89 EALEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCF-DQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGIL 556
            E++E+    + L P  +  ++ I G C  G +EDA++ F D +  +  +P+   Y  LIH       + +A  L  EM   G +P   T+N ++ GLC+ GNV  A +L+ +  +   +G  P +  Y+ LI  L + G    A  L  +M+ KG++
Sbjct:  704 ESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ---KGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857

HSP 3 Score: 70.4774 bits (171), Expect = 1.570e-11
Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEA---LEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDM-RGIGRGS 448
            Y+  + GL +    ++A      L   ++  P     ++ I G  + GD+  A    D+M  +G +PN+V Y+ LI   C+   V  A  L+ ++   G  P A T+NT++ GL + GNV  A++L E+ + +G+ RGS
Sbjct:  722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 54/184 (29.35%), Postives = 94/184 (51.09%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLFPRAVDR--SLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y +++ GL ++    +A+  L  ME+          S+ I G   +G  E+A   + +M E+G  PN+V+Y  L+   C+E +  EA E++  M   G LP A T+++++ G  + G    A+++ +E D  G  R        YS LI  LC  G  + A M+  +M+  GI PD + ++S++
Sbjct:  330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF----CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509

HSP 2 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 62/201 (30.85%), Postives = 96/201 (47.76%), Query Frame = 2

Query:   11 SKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQT 607
            +++G K  I  Y  ++ GL RE   +EA E L +M      P A   S  + GF   G  E+A + + +M + G   N   Y  LI   C   RV+EA  +  +M   G  P    +++++ GLC  G++  ALKL  E +      S P    Y+ L+  LC +     A  LL  M+ +G  PD +T N+ L  LS+++
Sbjct:  389 AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKS 589

HSP 3 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 57/199 (28.64%), Postives = 91/199 (45.73%), Query Frame = 2

Query:   26 KGRISPYDSVLYGLYREXXQDEALEHLKQMEK------LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQ 604
            K  +  ++SVL  +  E      LE    +        + P  +  +L I   C    V+ A   F  M E   +P+   Y  L+   C+EER+ EA  L+ EM   G  P    +N ++ GLC++G++    KLV+       +G +P    Y+ LI  LC KG    A  LL +MV    +P+ +T+ +L+  L +Q
Sbjct:  145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL---KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340

HSP 4 Score: 78.5666 bits (192), Expect = 5.764e-14
Identity = 60/215 (27.91%), Postives = 98/215 (45.58%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV----------------------------EEDM----RGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y +++ GL +E   DEA+  L +M  E   P  V  ++ I G C  GD+    +  D M  +G VPN V Y+ LIH  C + ++ +A  L++ M     +P   T+ T+++GL +Q     A++L+                            EE M    +   +G  P    YS L+  LC +G    A  +L +M+  G LP+  T++SL+
Sbjct:  225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP102_ARATH (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.340e-15
Identity = 51/196 (26.02%), Postives = 95/196 (48.47%), Query Frame = 2

Query:    5 EGSKEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E   +G +  +  Y S++  L       +A   L  M   K+ P  V  +  I  F  +G + +A++ +D+MI+    P++  Y  LI+ +C  +R+ EA  + + M      P   T+NT+++G C+   +   ++L  E  +   RG +  +  Y+ LI    +     +A M+  QMV  G+ P+ +T+N+LL
Sbjct:  285 EMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ---RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477

HSP 2 Score: 82.0333 bits (201), Expect = 5.213e-15
Identity = 54/177 (30.51%), Postives = 85/177 (48.02%), Query Frame = 2

Query:   92 ALEHLKQMEKLF--PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTWS 616
            AL  L +M KL   P  V  S  + G+C    + DA    DQM+E G  P+ + +  LIH      +  EA  L+  M   G  P   T+  V++GLC++G++  A  L+ +        ++     YS +I +LC+      A  L  +M  KG+ P+ +T++SL+ CL     WS
Sbjct:  139 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV---IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS 312

HSP 3 Score: 81.6481 bits (200), Expect = 6.809e-15
Identity = 53/186 (28.49%), Postives = 85/186 (45.70%), Query Frame = 2

Query:   35 ISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            I  Y S++ G       DEA    + M  +  FP  V  +  I GFC    +++    F +M + G V N V Y  LIH + Q      A  + K+M   G  P   T+NT+L GLC+ G +  A+ + E   R       P    Y+ +I+ +C+ G  +    L   +  KG+ PD + +N+++
Sbjct:  365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS---KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 547

HSP 4 Score: 77.411 bits (189), Expect = 1.284e-13
Identity = 56/193 (29.02%), Postives = 85/193 (44.04%), Query Frame = 2

Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQME--KLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            + G +  +  Y  V+ GL +    D A   L +ME  K+    V  S  I   C     +DA   F +M  +G  PNV+ Y  LI   C  ER  +AS L+ +M      P   TFN ++    ++G +  A KL +E ++   R   P    YS LI   C       A  +   M+ K   P+ +T+N+L+
Sbjct:  218 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK---RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.056e-15
Identity = 50/183 (27.32%), Postives = 94/183 (51.37%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEALEHLKQMEKLFPRA--VDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y++++ G  +    ++A+E   +ME+   RA  V  +  + G C  G   DA R    M+    VPNV+ +  +I  + +E +  EA +L +EMT     P   T+N++++GLC  G V  A ++++     + +G LP    Y+ LI   C+       + L  +M  +G++ D +T+N+++
Sbjct:  177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD---LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356

HSP 2 Score: 77.7962 bits (190), Expect = 9.832e-14
Identity = 50/168 (29.76%), Postives = 83/168 (49.40%), Query Frame = 2

Query:   98 EHLKQMEKLFPRAVDRSL-----KILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            E +K  E++  R VD  +      I G C+ G V++AK+  D M+ +G +P+VV Y+ LI+ +C+ +RV E ++L +EM   G +    T+NT++ G  + G    A ++           S P    YS L+  LC     + A +L   M    I  D  T+N ++
Sbjct:  262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR------MDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423

HSP 3 Score: 72.4034 bits (176), Expect = 4.131e-12
Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 2

Query:  128 PRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            P  V  S  I GFC    V DA     +M E G  P+VVIY+ +I   C+   V +A EL   M   G    A T+N++++GLC  G    A +L+  DM  + R  +P    ++ +I    ++G F  A  L  +M  + + PD  T+NSL+
Sbjct:  137 PDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM-RDM--VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286

[Close]

BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP440_ARATH (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 50/176 (28.41%), Postives = 84/176 (47.73%), Query Frame = 2

Query:   59 YGLYREXXQDEALEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            YGLY+E    E          L P  V     + GFC   ++  A+  F  M++ G  PN+ +Y+CLIH +C+   + EA  L+ EM      P   T+  +++GLC +  V  A +L ++          P S  Y+ LI   C++   + A  L  +M   G+ P+ +T+++L+
Sbjct:  289 YGLYKEILVAE----------LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMK---NERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451

HSP 2 Score: 82.4185 bits (202), Expect = 3.992e-15
Identity = 58/194 (29.90%), Postives = 95/194 (48.97%), Query Frame = 2

Query:   14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKL--FPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL-VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            K G    +  Y+ +++G  +     EA+  L +ME L   P     ++ I G C++  V +A R F +M  E   P+   Y+ LIH YC+E  + +A +L  EMT  G  P   TF+T++ G C   ++  A+ L  E  ++GI    +P    Y+ LI A  ++   + A  L   M+  GI P+  T+  L+
Sbjct:  332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI----VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLV 521

HSP 3 Score: 76.6406 bits (187), Expect = 2.190e-13
Identity = 52/183 (28.42%), Postives = 92/183 (50.27%), Query Frame = 2

Query:   44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586
            Y+S+++G  +E   ++AL+   +M    + P  +  S  I G+C   D++ A   + +M  +G VP+VV Y  LI A+ +E  ++EA  L  +M   G  P   TF  ++ G  ++G +  A+   +E+ +   + S      ++ LI+ LC+ G    AS     M   GI PD  ++ S+L
Sbjct:  412 YNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQ---QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML 591

HSP 4 Score: 75.0998 bits (183), Expect = 6.373e-13
Identity = 52/183 (28.42%), Postives = 88/183 (48.09%), Query Frame = 2

Query:   62 GLYREXXQDEALEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 604
            GLY +  +++ L+ +  +  + P     ++ IL  C D  +E+A++ F+ M + G +PN+  Y  +I  YC+   VR+A  L KE+     LP    F T++ G C+   + TA  L    +  +  G  P    Y+ LI   C+ G    A  LL +M    + PD  T+  L+  +C+  Q
Sbjct:  213 GLYSK--KEKLLDEMTSLG-IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF---VHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389

The following BLAST results are available for this feature:

BLAST of CK938637 vs. ExPASy Swiss-Prot

BLAST of CK938637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106


Match Name	E-value	Identity	Description
PP389_ARATH	6.158e-16	27.87	Pentatricopeptide repeat-containing protein At5g16...	[more]
PP100_ARATH	8.043e-16	31.64	Pentatricopeptide repeat-containing protein At1g63...	[more]
PPR26_ARATH	1.792e-15	32.26	Putative pentatricopeptide repeat-containing prote...	[more]
PP218_ARATH	1.792e-15	32.70	Pentatricopeptide repeat-containing protein At3g07...	[more]
PPR95_ARATH	2.340e-15	31.64	Pentatricopeptide repeat-containing protein At1g62...	[more]
PPR50_ARATH	2.340e-15	28.79	Putative pentatricopeptide repeat-containing prote...	[more]
PP327_ARATH	2.340e-15	29.35	Pentatricopeptide repeat-containing protein At4g20...	[more]
PP102_ARATH	2.340e-15	26.02	Pentatricopeptide repeat-containing protein At1g63...	[more]
PPR93_ARATH	3.056e-15	27.32	Pentatricopeptide repeat-containing protein At1g62...	[more]
PP440_ARATH	3.992e-15	28.41	Pentatricopeptide repeat-containing protein At5g61...	[more]

Pages

Properties


Property Name	Value
Genbank description	CGF1004440_B07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IF_B07 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK938637 ID=CK938637; Name=CK938637; organism=Citrus sinensis; type=EST; length=928bp
GGGGGAGGGTAGTAAGGAGGGTTCCAAGGGCCGTATTAGTCCATATGATA
GCGTGTTATATGGTCTCTACAGAGAAANNNAACAGGATGAAGCACTTGAG
CATCTAAAGCAAATGGAGAAGTTGTTCCCCAGAGCTGTTGATAGGAGCTT
GAAGATATTAGGCTTTTGTGTGGATGGCGACGTGGAAGATGCAAAAAGGT
GCTTTGATCAAATGATTGAGGAAGGGGGGGTTCCAAATGTTGTTATTTAT
GACTGCCTAATCCATGCATATTGCCAAGAAGAGCGAGTGCGCGAAGCATC
TGAGCTAATGAAGGAGATGACCGGCCATGGTTATTTACCTATTGCATCAA
CATTCAATACTGTTTTAAGTGGGTTATGCAGGCAAGGCAATGTTGGGACT
GCTTTGAAGCTCGTTGAGGAGGATATGCGTGGGATTGGGAGGGGTTCTTT
ACCTGGTAGTGGACATTACAGCCCTTTAATCAAGGCTCTTTGTGAGAAGG
GTGGTTTTCAGAGTGCGTCAATGCTCCTTGTGCAAATGGTTGGCAAGGGC
ATCCTTCCTGATTATCTGACGTGGAATTCGTTGCTTATTTGTCTTAGTCA
ACAAACAACATGGTCAGTCAACATGTCCCATTTCCCTAAATAAATAATTG
CGATTGATTATAAAGACCTGAACCGTTGCTGCCGAAGGCTTCTCTTGCTC
TTGCTGAATGAGATGGTGGTTCACGAGCTGTCGGCAAAAGAGAAAAGATG
CAAATTGCGCATTTGGCCCACGGAGCTGGTTCGGTTTGGTTAGGTTTGCG
CATACACGATACGACACATACATTCATAATCCATCGACGTGTGGAAGTTG
GCCACGTCTTTTGCTCTTTCAGTTCACTAAAAGACGACGTTGACACTTGA
CGCACAACACGCTCATTATTCACGTGGT