CK938637
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP230_ARATH (Pentatricopeptide repeat-containing protein At3g14580, mitochondrial OS=Arabidopsis thaliana GN=At3g14580 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.087e-12 Identity = 42/152 (27.63%), Postives = 79/152 (51.97%), Query Frame = 2 Query: 146 SLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 601 ++ I G C G++E A + D+ ++ PNV+ + LI +C + + EA +L++ M P TFN ++SGL ++G V + L+E R +G P G Y ++ L +K A ++ QM+ G+ P +L++ +++ L + Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLE---RMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCE 354
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP187_ARATH (Pentatricopeptide repeat-containing protein At2g36240 OS=Arabidopsis thaliana GN=At2g36240 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.420e-12 Identity = 54/203 (26.60%), Postives = 101/203 (49.75%), Query Frame = 2 Query: 14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTT 610 KE +K + ++ ++ G R D AL+ ++M++ P V + I GF G +E+ + +MIE G + + L+ C+E RV +A L+ ++ LP + +++ LC + A++++EE + +G P + L++ L + G + AS + +M+ GILPD +T+N LL +C S +T Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWK---KGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHST 420
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.854e-12 Identity = 47/197 (23.86%), Postives = 95/197 (48.22%), Query Frame = 2 Query: 17 EGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQ 601 +G + Y++V+ L + + A L +M+ + P V + + G+ V GDV+ ++++ G P+V+ + +I+ C+ + +++A + KEM G P T+N ++ C G+ ++KL + G P Y+ I++ C+ + A LL M+ G+ PD T+++L+ LS+ Sbjct: 419 DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKE---NGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSE 612
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19895 OS=Arabidopsis thaliana GN=At4g19895 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.422e-12 Identity = 49/187 (26.20%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 17 EGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLT 571 EG I Y++ + L ++ EA E L + L V ++ I C D+ A F +M + G ++ + + LI A+C++++++E+ L + + G +P T+ +++S C++G++ ALK R G +P S Y LI LC+K A L M+ +G+ P +T Sbjct: 422 EGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR---HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP434_ARATH (Pentatricopeptide repeat-containing protein At5g57250, mitochondrial OS=Arabidopsis thaliana GN=At5g57250 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12 Identity = 54/183 (29.51%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 44 YDSVLYGLYREXXQDEALEHLKQM-EKLFPR-AVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 Y + ++G ++ +AL ++M EK R V S+ I G +G+VE+A +MI+EG PN++ Y +I C+ ++ EA L + G + T++ G+CR+GN+ A ++ DM RG P Y+ +I LC G A V KG++ D +T+++LL Sbjct: 245 YSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSML-GDME--QRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYSTLL 419 HSP 2 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 47/168 (27.98%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMV 541 Y+S++ GL ++ EAL +E L P V + I C +G DA++ D M+ +G VPN++IY+ ++ YC+ + +A ++ P A T ++++ G C++G++ AL + E G + LIK C KG + A LL +M+ Sbjct: 693 YNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFG---FLFLIKGFCTKGRMEEARGLLREML 857
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP365_ARATH (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.163e-12 Identity = 53/193 (27.46%), Postives = 89/193 (46.11%), Query Frame = 2 Query: 14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKLFPRAVDRSLK--ILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 KEG K + Y++++ D A++ +K+M+KL R R+ I G+ GD+ + FD M G VP V ++ LI+ ++ ++ +A E++ EMT G T+ ++ G G+ G K E R G Y L+KA C+ G QSA + +M + I + +N L+ Sbjct: 547 KEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTG---KAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILI 736
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.395e-12 Identity = 51/191 (26.70%), Postives = 92/191 (48.17%), Query Frame = 2 Query: 20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQMEKLFPRAVDRSLKIL--GFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 G + Y S++ GL + D+ALE +M+ + + L GFC ++E A F +++EEG P+ IY+ LI + + A +L K+M G T+ T++ GL + GN+ A +L E M+ + G +P Y+ ++ L +KG F + +M + P+ L +N+++ Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE-MQAV--GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801 HSP 2 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 49/194 (25.26%), Postives = 90/194 (46.39%), Query Frame = 2 Query: 14 KEGSKGRISPYDSVLYGLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 ++G K Y ++ G +R + ALE + M + V I G C G A+ MIEE + + + Y+ +I + +E + A +EM G+G P T+ ++++GLC+ + AL++ +E + +P Y LI C++ +SAS L +++ +G+ P +NSL+ Sbjct: 506 EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA---YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLI 696 HSP 3 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 52/201 (25.87%), Postives = 94/201 (46.77%), Query Frame = 2 Query: 47 DSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKL----VEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQTTWSVNM 625 +++L L ++ DEA E L +ME + P V + +LG C +++ A+ F ++E+G PN Y LI + + A E++ MT + T+++GLC+ G A +L +EE + S Y+ +I ++G SA +M G GI P+ +T+ SL+ +C + + ++ M Sbjct: 447 NTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS------YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 7.046e-12 Identity = 48/152 (31.58%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 95 LEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 550 L H+K++ + P + + I G G++E K D+M++ G P+VV Y +I Y + +A E+ +EMT G LP T+N+++ GLC G A L++E RG P YS L+ L + G A ++ +MV KG Sbjct: 312 LNHMKEVG-IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEME---SRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 53/177 (29.94%), Postives = 83/177 (46.89%), Query Frame = 2 Query: 44 YDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYL 568 Y ++ GL + A E L M K L P + ++ I G+ GD A + M+ G PNV + LIH Y + R+ +A + EM P +T+N +L C G++ A +L +E +R RG P Y+ L++ LC KG + A LL ++ GI D++ Sbjct: 373 YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR---RGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHV 546
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 53/200 (26.50%), Postives = 89/200 (44.50%), Query Frame = 2 Query: 20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 613 G I Y+S++ R+ DEA+E QM + P + + GF G VE A F++M G PN+ ++ I Y + E ++ E+ G P T+NT+L+ + G + +E R G +P ++ LI A G F+ A + +M+ G+ PD T+N++L L++ W Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRA---GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540 The following BLAST results are available for this feature:
BLAST of CK938637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938637 ID=CK938637; Name=CK938637; organism=Citrus sinensis; type=EST; length=928bpback to top |