CK938637
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.202e-12 Identity = 48/180 (26.67%), Postives = 87/180 (48.33%), Query Frame = 2 Query: 62 GLYREXXQDEALEHLKQM--EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 595 GLY++ +A + M + P V ++ I G C G +DA++ F +M G P+ V ++ L+ +C+ R+ EA EL++ G++ +++++ GL R A +L ++ + P Y+ LI+ L + G + A LL M KGI PD +N+++ L Sbjct: 207 GLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLK---KNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKAL 383
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.202e-11 Identity = 49/183 (26.78%), Postives = 93/183 (50.82%), Query Frame = 2 Query: 44 YDSVLYGLYREXXQDEALEHLKQMEKLF-PRAVDRSLKILGFCVD-GDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 Y +++ G D+A ++ + K P ++ S ++G C G + DA+ F M EG +VV Y+ L+H Y + ++ + EL+ EM G P +T+N ++ + +G + A +++ E +R RG +P + ++ +I ++G FQ A +L M + PD +T ++LL Sbjct: 411 YTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIR---RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.570e-11 Identity = 51/189 (26.98%), Postives = 87/189 (46.03%), Query Frame = 2 Query: 8 GSKEGSKGRISPY--DSVLYGLYREXXQDEALEHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPD 562 G S ++PY + ++ G ++ D+A +M ++P ++ I C G ++DA+ M P+VV Y+ L+H Y + + EAS L ++ P T+NT++ GLC GN+ A +L EE + P Y+ L+K + G A+ + +M+ KGI PD Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL---IFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 48/162 (29.63%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 140 DRSLKILGFCVD-----GDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL--ICLSQQ 604 D S+KI +D ++ + M +G PNV Y+ L+ A C+ +V A +L+ EM+ G P A ++ TV+S +C G V +L E P Y+ LI LC++ ++ A L+ +MV KGI P+ +++++L+ +C S Q Sbjct: 143 DPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER--------FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP155_ARATH (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.050e-11 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 59 YGLYREXX--QDEALEHLKQM-EKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGV-PNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEE-DMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 Y +YRE D +++ K+M K+ P A + ++ F +G+ E +R + +M EE G PNV Y+ L+ AYC + EA ++ +EM G + +NT++ GLC V A +L + ++GI L Y L+ C+ G S ++ +M KG D LT +L+ Sbjct: 217 YKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLT----YEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALV 393
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP299_ARATH (Pentatricopeptide repeat-containing protein At4g01570 OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.677e-11 Identity = 43/153 (28.10%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 155 ILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLSQQTTW 613 I G C ++DA R + +M G VP+ ++Y+CL+ + +V EA +L ++M G T+N ++ GL R G L + + +G + +S + LC +G + A L+ +M +G D +T +SLLI +Q W Sbjct: 331 IQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKK---KGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11 Identity = 49/191 (25.65%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 20 GSKGRISPYDSVLYGLYREXXQDEALEHLKQME--KLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLL 586 G++ + Y+ ++ + +E + A ++M+ L P V + I GF G ++D F++M + P+V+ Y+ LI+ +C+ ++ E +EM G+G P +++T++ C++G + A+K DMR + G +P Y+ LI A C+ G A L +M+ G+ + +T+ +L+ Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY-VDMRRV--GLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP112_ARATH (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.497e-11 Identity = 50/172 (29.07%), Postives = 85/172 (49.42%), Query Frame = 2 Query: 50 SVLYGLYREXXQDEALEHLKQMEKL-FPRAVDRSLKILG-FCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILP 559 S++ GL E ++ALE ++ + FP ++G +C +EDA + D+M +G PN YD ++H + +R +EA E+ + M+ P ST+ ++ C + + A+K+ +E G+G LPG +S LI ALC + A +M+ GI P Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVSTYEIMVRMFCNKERLDMAIKIWDEMK---GKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP356_ARATH (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana GN=At4g38150 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 42/155 (27.10%), Postives = 75/155 (48.39%), Query Frame = 2 Query: 86 DEALEHLKQMEKLFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKG 550 DE + +K+ L P AV + G C DG V++A + F M ++G +P VVIY ++ A+C+ ++ +A + ++M +G P A ++ ++ GL + A+ E + G P + L+ ALC G + A + + KG Sbjct: 119 DEIFKKMKE-GGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLES---GHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
BLAST of CK938637 vs. ExPASy Swiss-Prot
Match: PP292_ARATH (Pentatricopeptide repeat-containing protein At3g61520, mitochondrial OS=Arabidopsis thaliana GN=At3g61520 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.567e-11 Identity = 58/187 (31.02%), Postives = 89/187 (47.59%), Query Frame = 2 Query: 50 SVLYGLYREXXQDEAL-EHLKQMEK--LFPRAVDRSLKILGFCVDGDVEDAKRCFDQMIEEGGVPNVVIYDCLIHAYCQEERVREASELMKEMTGHGYL-PIASTFNTVLSGLCRQGNVGTALKLVEEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICLS 598 ++L GL+ + E + E L MEK P ++ + I F D E +R +QM E+G P V Y +I AYC + EA +L K+M H + P +N +++ + GN G AL L EE + R P Y+ L K L EK ++ L+ +MV + P+ +T L+ LS Sbjct: 550 NMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR---PNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733 The following BLAST results are available for this feature:
BLAST of CK938637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938637 ID=CK938637; Name=CK938637; organism=Citrus sinensis; type=EST; length=928bpback to top |